Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0387
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 139 VYLGVPLLCILDSIVVATLYRHIQMRRPRK 50
           V +  PL+  L + V    YRH Q RR  +
Sbjct: 383 VLIIAPLIATLIATVTVNYYRHKQKRRDER 412


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 154 HEPFYAWYDSKNSKSRIDYYGGMVKTYQ 237
           HEP  A+Y ++N   +   Y G V  Y+
Sbjct: 412 HEPGAAYYQNENMLQKNAEYSGKVGYYE 439


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 154 HEPFYAWYDSKNSKSRIDYYGGMVKTYQ 237
           HEP  A+Y ++N   +   Y G V  Y+
Sbjct: 360 HEPGAAYYQNENMLQKNAEYSGKVGYYE 387


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +2

Query: 287 GHNGNRDEQGDVPASQFDARSAPRHPISATGH 382
           GH       G+ P     +   P HP+S + H
Sbjct: 53  GHGSLLSPSGNTPNKSSTSPYPPNHPLSGSKH 84


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 169 AWYDSKNSKSRIDYYGGM 222
           AW+D  ++ S +D  GGM
Sbjct: 188 AWWDVHSTGSWLDMSGGM 205


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 217 LHSNRFLICCSYCRTKHRMAHAVQH 143
           +H+N     C  CR + R  H + H
Sbjct: 240 IHTNEKPFECDKCRGRFRRRHHLVH 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,595
Number of Sequences: 336
Number of extensions: 3956
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)