Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0336
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58758-1|AAB93429.2|  819|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z49127-5|CAA88945.1|  421|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z48009-11|CAA88088.2|  467|Caenorhabditis elegans Hypothetical p...    29   5.7  

>U58758-1|AAB93429.2|  819|Caenorhabditis elegans Hypothetical
           protein ZK1127.7 protein.
          Length = 819

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 332 HPVLYYEGYRSVTSNFGFESSKCFKTFYRNFSRFKFYG 219
           + + YY G  ++TS    E+ KCF    R+  RFK+ G
Sbjct: 219 YTIKYYNGLGTLTSK---EAKKCFSDMVRHRIRFKYNG 253


>Z49127-5|CAA88945.1|  421|Caenorhabditis elegans Hypothetical
           protein F13D12.5 protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 591 IVLKTYKTFIPTANNYIFIRRGRNQNK 511
           +V KT K  I  AN+Y  +R G+N NK
Sbjct: 297 VVPKTNKLLIIRANDYCMLRDGKNYNK 323


>Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical
           protein T10B10.7 protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 567 RFCKFLKLCVQP*IVGSFFLGSFQAIINYLKKXLGIXRTL 686
           +FC+ L LC  P  VG +   SF  I N L   + I  TL
Sbjct: 543 KFCQILVLCTVPLRVGCYLDDSFLVIENLLVVCIVIMSTL 582


>Z48009-11|CAA88088.2|  467|Caenorhabditis elegans Hypothetical
           protein AH6.5 protein.
          Length = 467

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 624 KKNXLQFKAARIVLKTYKTFIPTANNYIFIRRGRNQN 514
           +K+  Q    R V  T  T +PT+  Y  ++R RN+N
Sbjct: 172 RKSGAQISTTRTVPLTSSTPLPTSREYETVQRDRNRN 208


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,619,860
Number of Sequences: 27780
Number of extensions: 343146
Number of successful extensions: 763
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)