Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0332
         (794 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B417B Cluster: PREDICTED: similar to apolipopho...    50   9e-05
UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...    46   8e-04
UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- ...    44   0.006
UniRef50_A1RUR9 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  
UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and...    33   8.3  

>UniRef50_UPI00015B417B Cluster: PREDICTED: similar to apolipophorin;
            n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
            apolipophorin - Nasonia vitripennis
          Length = 3385

 Score = 49.6 bits (113), Expect = 9e-05
 Identities = 21/70 (30%), Positives = 40/70 (57%)
 Frame = +1

Query: 31   VPEKILEVTQILYSNIQKLLPTQESRDLAEAIHSXVQKKLRXQKXXDEKELRVVYQKLIT 210
            +P+ I+   +   +NI+  LPTQE +D    +++ V K ++ QK  D  E++ +Y + I 
Sbjct: 2672 IPDYIIAPVEEFCNNIKNFLPTQELKDFFSTVYNYVLKHVKHQKVDDTNEVKKIYSQAIN 2731

Query: 211  AVTSLVQFLR 240
            A  S++  L+
Sbjct: 2732 AARSIIGLLQ 2741


>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score = 46.4 bits (105), Expect = 8e-04
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +2

Query: 446  NPLXEVPSKLRAVVVNGQHIFRSTVATHLS-QGTVATYWRTXTSXENFTLLIQLPKRXNP 622
            +PL EVP+KLRAVVVNGQHIF +    HL+  GT            NFT+L+QL     P
Sbjct: 2724 DPLDEVPNKLRAVVVNGQHIF-TFDGRHLTFPGTCRYVLIHDHVDRNFTVLMQL-ANGQP 2781

Query: 623  RLLFWKIRTXYHRXAKKIGQAI 688
            + L  + ++      K  GQ I
Sbjct: 2782 KALVLEDKSGTIIELKDNGQVI 2803



 Score = 38.7 bits (86), Expect = 0.17
 Identities = 15/49 (30%), Positives = 31/49 (63%)
 Frame = +1

Query: 37   EKILEVTQILYSNIQKLLPTQESRDLAEAIHSXVQKKLRXQKXXDEKEL 183
            E+ +++    Y    K+LPT E ++ A+A+++ + KK++ +K  + KEL
Sbjct: 2597 ERAVQLVSQAYEAFSKILPTDELKEFAKALNAYLLKKIKEEKMEESKEL 2645


>UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- and
            fatty-acid binding protein CG11064-PA isoform 1; n=1;
            Apis mellifera|Rep: PREDICTED: similar to Retinoid- and
            fatty-acid binding protein CG11064-PA isoform 1 - Apis
            mellifera
          Length = 3360

 Score = 43.6 bits (98), Expect = 0.006
 Identities = 22/72 (30%), Positives = 37/72 (51%)
 Frame = +1

Query: 31   VPEKILEVTQILYSNIQKLLPTQESRDLAEAIHSXVQKKLRXQKXXDEKELRVVYQKLIT 210
            +P+ IL   + L    + +LPT+E R   +     + K ++ QK  D  EL+ +Y  L+ 
Sbjct: 2657 IPDNILNSLEELCKLGKNILPTEELRHFVDITCEYIIKLVKRQKINDMNELKKIYSSLVA 2716

Query: 211  AVTSLVQFLRXQ 246
            AV S+V   + Q
Sbjct: 2717 AVQSIVALAQKQ 2728


>UniRef50_A1RUR9 Cluster: Putative uncharacterized protein; n=1;
           Pyrobaculum islandicum DSM 4184|Rep: Putative
           uncharacterized protein - Pyrobaculum islandicum (strain
           DSM 4184 / JCM 9189)
          Length = 138

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -3

Query: 261 CQIVQLXPQELDERCDSCDQLLIDHTQLLL 172
           CQ+V L P E+  RCDS D+LL+ H   LL
Sbjct: 13  CQVVALPPGEIWLRCDSVDELLL-HLDALL 41


>UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and
            fatty acid-binding glycoprotein) [Contains:
            Apolipophorin-2 (Apolipophorin II) (ApoL2);
            Apolipophorin-1 (Apolipophorin I) (ApoL1)]; n=11;
            Eukaryota|Rep: Apolipophorins precursor (Retinoid- and
            fatty acid-binding glycoprotein) [Contains:
            Apolipophorin-2 (Apolipophorin II) (ApoL2);
            Apolipophorin-1 (Apolipophorin I) (ApoL1)] - Drosophila
            melanogaster (Fruit fly)
          Length = 3351

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 511  FDGRHSPFXGNCRYVLAHXHVXRKLHAANPTSKTGKPKALILEDKNG 651
            FDG +  + GNC+Y+LA   V          +  GK K++ L D+ G
Sbjct: 2799 FDGLNFAYPGNCKYILAQDSVDNNFTIIGQLT-NGKLKSITLIDREG 2844


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,626,363
Number of Sequences: 1657284
Number of extensions: 10026557
Number of successful extensions: 21193
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21191
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)