Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0332
         (794 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.6  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 49  EVTQILYSNIQKLLPTQESRDLAEAIHSXVQKKLRXQKXXDEKELRVVYQK 201
           EV Q+    +QK L T+E +DL +        KL      + +  R + Q+
Sbjct: 19  EVAQVWEQTLQKGLDTEEIKDLLQKYPPIANCKLVQAPKLNAEVKRAITQQ 69


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 596 IQLPKRXNPRLLFWKIR 646
           I+  KR NP +  W+IR
Sbjct: 121 IEQYKRENPSIFSWEIR 137


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 258 QIVQLXPQELDERCDSCDQL 199
           QIV +  +  D+ CD CD +
Sbjct: 511 QIVDICIRSHDKLCDVCDSV 530


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,741
Number of Sequences: 336
Number of extensions: 2470
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)