Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0332
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79605-1|CAB01904.1|  719|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U10413-2|AAA20090.1|  719|Caenorhabditis elegans lin-15A protein...    29   3.8  
U10411-1|AAA20087.1|  719|Caenorhabditis elegans lin-15A protein...    29   3.8  
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>Z79605-1|CAB01904.1|  719|Caenorhabditis elegans Hypothetical
           protein ZK678.1 protein.
          Length = 719

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 557 WRTXTSXENFTLLIQLPKRXNPRLLFWKIRTXYHRXAKKIGQAISE 694
           +RT  S EN T L+  P   +PR +   +R      AK++  A SE
Sbjct: 648 YRTRKSVENKTDLLNQPTSASPRRMIKVVRNRNPHLAKQVAAAPSE 693


>U10413-2|AAA20090.1|  719|Caenorhabditis elegans lin-15A protein
           protein.
          Length = 719

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 557 WRTXTSXENFTLLIQLPKRXNPRLLFWKIRTXYHRXAKKIGQAISE 694
           +RT  S EN T L+  P   +PR +   +R      AK++  A SE
Sbjct: 648 YRTRKSVENKTDLLNQPTSASPRRMIKVVRNRNPHLAKQVAAAPSE 693


>U10411-1|AAA20087.1|  719|Caenorhabditis elegans lin-15A protein
           protein.
          Length = 719

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 557 WRTXTSXENFTLLIQLPKRXNPRLLFWKIRTXYHRXAKKIGQAISE 694
           +RT  S EN T L+  P   +PR +   +R      AK++  A SE
Sbjct: 648 YRTRKSVENKTDLLNQPTSASPRRMIKVVRNRNPHLAKQVAAAPSE 693


>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
           protein H08M01.2b protein.
          Length = 1341

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +1

Query: 559 AHXHVXRKLHAANPTSKTGKPKALILEDKNGVSSXCXENWTGYF 690
           AH H    L+ A   SKT KP  +     +  S  C +N+   F
Sbjct: 179 AHLHSSHVLNIAKAISKTKKPVIIAFTKCDEASEECKKNYLNLF 222


>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
           protein H08M01.2a protein.
          Length = 1320

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +1

Query: 559 AHXHVXRKLHAANPTSKTGKPKALILEDKNGVSSXCXENWTGYF 690
           AH H    L+ A   SKT KP  +     +  S  C +N+   F
Sbjct: 179 AHLHSSHVLNIAKAISKTKKPVIIAFTKCDEASEECKKNYLNLF 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,272,212
Number of Sequences: 27780
Number of extensions: 236887
Number of successful extensions: 586
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)