Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0324
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   2.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   5.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   7.0  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 117 WAPVTTEHQVGCELIHP 167
           W    TEH +GC L  P
Sbjct: 212 WMQKATEHVIGCVLCSP 228


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 117 WAPVTTEHQVGCELIHP 167
           W    TEH +GC L  P
Sbjct: 526 WMQKATEHVIGCVLCSP 542


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 117 WAPVTTEHQVGCELIHP 167
           W    TEH +GC L  P
Sbjct: 786 WLQKATEHVIGCVLCSP 802


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 117 WAPVTTEHQVGCELIHP 167
           W    TEH +GC L  P
Sbjct: 786 WLQKATEHVIGCVLCSP 802


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 117 WAPVTTEHQVGCELIHP 167
           W    TEH +GC L  P
Sbjct: 759 WMQKATEHVIGCVLCSP 775


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 117 WAPVTTEHQVGCELIHP 167
           W    TEH +GC L  P
Sbjct: 759 WMQKATEHVIGCVLCSP 775


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 117 WAPVTTEHQVGCELIHP 167
           W    TEH +GC L  P
Sbjct: 786 WLQKATEHVIGCVLCSP 802


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 117 WAPVTTEHQVGCELIHP 167
           W    TEH +GC L  P
Sbjct: 786 WLQKATEHVIGCVLCSP 802


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 111 CLWAPVTTEHQVGCELIHPSYQ*KINKKLPFAA 209
           C ++PV+       E+   SY  KI    PF A
Sbjct: 41  CQYSPVSNSDSENSEVSSNSYTPKIKSCRPFKA 73


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 55  YTETLELTS*GGWRI 99
           Y E +EL   GGW++
Sbjct: 299 YNEIVELQKEGGWKV 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,252
Number of Sequences: 336
Number of extensions: 2729
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)