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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0320
         (826 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   169   4e-43
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...    93   4e-20
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...    92   8e-20
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...    87   2e-18
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    59   9e-10
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    47   4e-06
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    43   6e-05
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    32   0.086
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    28   1.8  
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr...    27   3.2  
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c...    26   7.5  
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc...    26   7.5  
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    26   7.5  
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce...    25   9.9  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  169 bits (411), Expect = 4e-43
 Identities = 97/175 (55%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
 Frame = +2

Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
           +RGILTLKYPIEH IV NWDDMEKIW HTF NELRVAPEEHP LLTEAPLNPK+      
Sbjct: 61  KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKS-----N 115

Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTAS 610
           +E M QI+F TFN PA YVAIQAVLS      TTGIVLDSGDGV+   P   G   P A 
Sbjct: 116 REKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 175

Query: 611 WS-GLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
               L       YLMKI    G +             + +   VAL+F QE+ TA
Sbjct: 176 MRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQTA 230



 Score =  121 bits (292), Expect = 1e-28
 Identities = 54/60 (90%), Positives = 58/60 (96%)
 Frame = +3

Query: 75  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
           +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDS VGDEAQSK
Sbjct: 2   EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61



 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 29/70 (41%), Positives = 33/70 (47%)
 Frame = +3

Query: 615 LDLXGRDLTDTS*RSHRARVNRXITTAERGIVRDIXXKLCKXLSNSXRRWQRLIQEFPRG 794
           LDL GRDLTD   +    R     TTAER IVRDI  KLC    +  +  Q   Q     
Sbjct: 178 LDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLE 237

Query: 795 SLXEXSEGQV 824
              E  +GQV
Sbjct: 238 KSYELPDGQV 247


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 93.1 bits (221), Expect = 4e-20
 Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
 Frame = +2

Query: 254 RGILTLKYPIEHXIVTNWDDMEKIWXHTFXNE-LRVAPEEHPVLLTEAPLNPKAQKPXGG 430
           RG+L ++ PIE  I+ NW DME+IW + + ++ L   PEEHP+LLTE PL          
Sbjct: 66  RGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPL-----ANIRN 120

Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA 607
           KE + +  + T N PA+  ++Q VL+      TTGIVL+ GDG++   P   G   P+A
Sbjct: 121 KEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSA 179



 Score = 68.1 bits (159), Expect = 1e-12
 Identities = 30/53 (56%), Positives = 38/53 (71%)
 Frame = +3

Query: 93  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQS 251
           + +DNGSG  KAGFAGDD P+ +FP+ VGR +H+ VM    QKD  VG EAQ+
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQN 64



 Score = 29.9 bits (64), Expect = 0.46
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 618 DLXGRDLTDTS*RSHRARVNRXITTAERGIVRDIXXKLCKXLSN 749
           ++ GRD+TD      R   +  +++AE+ IVR+I  K C   S+
Sbjct: 184 EIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASD 227



 Score = 26.2 bits (55), Expect = 5.6
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 565 HTVPIYEGYALPHGI 609
           H+VPIY+G+++P  I
Sbjct: 166 HSVPIYDGFSIPSAI 180


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score = 92.3 bits (219), Expect = 8e-20
 Identities = 43/108 (39%), Positives = 70/108 (64%)
 Frame = +2

Query: 254 RGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGK 433
           R +L +KYP+E+ I+ ++++M ++W +TF  +L++ P    +LLTE P+NP A      +
Sbjct: 62  RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVA-----NR 116

Query: 434 EXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYP 577
           E M + MF  +    +YVAIQAVLS     +++G+V+DSGDGV+   P
Sbjct: 117 EKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVP 164



 Score = 54.4 bits (125), Expect = 2e-08
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = +3

Query: 81  EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSXVGDEAQS 251
           E A +V+DNG+G  K G+A D+ PR  FPSIVGRP  R +     +  KD  VGDEA++
Sbjct: 2   ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEA 60


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score = 87.4 bits (207), Expect = 2e-18
 Identities = 50/116 (43%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
 Frame = +2

Query: 266 TLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXMX 445
           +L YPI H  + NWD ME+ W  +    LR  PE+H  LLTE PLNP        +E   
Sbjct: 89  SLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPE-----NRENTA 143

Query: 446 QIMFXTFNTPAMYVAIQAVL----SCXRPVVT----TGIVLDSGDGVSTPYPSTRG 589
           +IMF +FN   +Y+A+QAVL    S     VT    TG V+DSGDGV+   P   G
Sbjct: 144 EIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEG 199



 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = +3

Query: 93  LVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
           +++DNG+G  K G+AG+DAP  VFP+++
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVI 35


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 58.8 bits (136), Expect = 9e-10
 Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
 Frame = +2

Query: 278 PIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXMXQIMF 457
           P E  +++NWD ME++  +TF  +L +   EHP+ +TE   NP        +  M +++F
Sbjct: 86  PFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYV-----RSTMTELLF 139

Query: 458 XTFNTPAMYVAIQAVLSCXRPV--VTTGIVLDSGDGVSTPYPSTRG----THSPTASWSG 619
             +N P++   I  + S        ++GIVL+ G+  S   P   G    + +   SW G
Sbjct: 140 ELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGG 199

Query: 620 LGRSRSHRYLMKI 658
              S+S  YL+K+
Sbjct: 200 ---SQSSSYLLKL 209



 Score = 35.9 bits (79), Expect = 0.007
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 93  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 188
           LV+DNGS   +AG+ G+  P+ VF ++V R R
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 46.8 bits (106), Expect = 4e-06
 Identities = 27/97 (27%), Positives = 44/97 (45%)
 Frame = +2

Query: 263 LTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXM 442
           + +K  I +  V NWD    +W +    +L+  P EHP+L+TE P +     P   +   
Sbjct: 63  MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITE-PFD----NPPENRVKT 117

Query: 443 XQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSG 553
            + MF +   PA Y+A Q   +       T  ++D G
Sbjct: 118 LETMFESLRCPATYLAKQETCAAFASGKGTACLVDIG 154



 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +3

Query: 78  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 179
           +EV+A+V+D GS   + GF+G+D P+ V PS  G
Sbjct: 9   DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 42.7 bits (96), Expect = 6e-05
 Identities = 23/99 (23%), Positives = 46/99 (46%)
 Frame = +2

Query: 293 IVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXMXQIMFXTFNT 472
           I+ +W+     W      +L+V P E+ +++TE   NP++      ++ + +  F   + 
Sbjct: 76  IIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSV-----RQQIMEAAFEQLHV 130

Query: 473 PAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRG 589
           PA Y+  QAV        +T +++D G   ++  P   G
Sbjct: 131 PAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDG 169



 Score = 36.7 bits (81), Expect = 0.004
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +3

Query: 78  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 179
           EE+ +LV+D GS   + G+AG+++P  + PS  G
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 32.3 bits (70), Expect = 0.086
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
 Frame = -1

Query: 259 TSLLCASS----PTXESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTT 95
           TS  C +S    PT  S  P+ PT+ P     P    N     S P         PL+TT
Sbjct: 389 TSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATT 448

Query: 94  NAATSSS 74
           N  TS+S
Sbjct: 449 NCTTSTS 455


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -1

Query: 238 SPTXESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 122
           S T +SF   P+PT  P    LPT   NT +    P+ PAL
Sbjct: 64  SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101


>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1517

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 138 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQS 251
           G+  PRA F  ++  P H G+++ M  KD   G+E  S
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMS 537


>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 488

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -3

Query: 236 TYXRVLLSHTDHHALMAGPSDDRGEYGARSIISCETGLAHTG 111
           TY  +LL   D + +  G  +DR +  + + + C   L H+G
Sbjct: 226 TYPSLLLEEWDRYLMQNGSENDRPDSYSSTQLYCVLCLDHSG 267


>SPCP1E11.04c |pal1||membrane associated protein Pal1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 425

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 132 NRPCTYRSHCLLPTRQLP 79
           NRP  YRSH  + TR+ P
Sbjct: 323 NRPSNYRSHSSMGTRRSP 340


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 18/92 (19%), Positives = 35/92 (38%)
 Frame = +2

Query: 278 PIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXMXQIMF 457
           PI+   V +W+ ++  W H +   L+  P +         + P        +E   Q  F
Sbjct: 113 PIQRGRVVDWEALKAFWKHLYSLLLK-DPNDTTFRYPVCLVIP-TYWSLYDRELATQFFF 170

Query: 458 XTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSG 553
                P   +A + ++      +  G+V+D G
Sbjct: 171 EECQVPGFTIAYEPLMGLYAIGILHGLVIDIG 202


>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 473

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 555 TVSPHRTHLRGVRTPPRHPGLDLXGRD 635
           T++ H   +RG+   PRHP L   G D
Sbjct: 200 TLTGHIATVRGLAVSPRHPYLFSCGED 226


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,271,633
Number of Sequences: 5004
Number of extensions: 67502
Number of successful extensions: 205
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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