Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0320
(826 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 185 4e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 185 4e-47
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 184 5e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 184 5e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 184 5e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 184 5e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 184 5e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 184 5e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 184 5e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 184 5e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 169 2e-42
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 130 9e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 130 9e-31
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 129 2e-30
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 129 2e-30
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 125 3e-29
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 101 8e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 88 6e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 66 3e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 31 1.0
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 31 1.0
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 30 1.7
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.0
U40800-14|AAA81498.4| 727|Caenorhabditis elegans Hypothetical p... 29 5.3
AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical ... 29 5.3
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 28 7.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 28 7.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.1
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 7.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 9.3
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 185 bits (450), Expect = 4e-47
Identities = 107/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 116
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTGIVLDSGDGV+ P G P A
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 177 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Score = 129 bits (312), Expect = 2e-30
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 185 bits (450), Expect = 4e-47
Identities = 107/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 116
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTGIVLDSGDGV+ P G P A
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 177 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Score = 128 bits (308), Expect = 6e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 184 bits (449), Expect = 5e-47
Identities = 106/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 116
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTG+VLDSGDGV+ P G P A
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 177 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Score = 130 bits (315), Expect = 9e-31
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 184 bits (449), Expect = 5e-47
Identities = 106/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 116
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTG+VLDSGDGV+ P G P A
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 177 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Score = 130 bits (315), Expect = 9e-31
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (449), Expect = 5e-47
Identities = 106/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 116
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTG+VLDSGDGV+ P G P A
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 177 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Score = 130 bits (315), Expect = 9e-31
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 184 bits (449), Expect = 5e-47
Identities = 106/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 116
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTG+VLDSGDGV+ P G P A
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 177 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Score = 130 bits (315), Expect = 9e-31
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (449), Expect = 5e-47
Identities = 106/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 116
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTG+VLDSGDGV+ P G P A
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 177 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Score = 130 bits (315), Expect = 9e-31
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 184 bits (449), Expect = 5e-47
Identities = 106/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 18 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 72
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTG+VLDSGDGV+ P G P A
Sbjct: 73 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 132
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 133 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 187
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3
Query: 201 MVGMGQKDSXVGDEAQSK 254
MVGMGQKDS VGDEAQSK
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 184 bits (449), Expect = 5e-47
Identities = 106/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 48 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 102
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTG+VLDSGDGV+ P G P A
Sbjct: 103 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 162
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 163 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 217
Score = 92.3 bits (219), Expect = 4e-19
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +3
Query: 123 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQSK
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 184 bits (449), Expect = 5e-47
Identities = 106/176 (60%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 116
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTG+VLDSGDGV+ P G P A
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G S + + VAL+F QEMATA
Sbjct: 177 LRLDLAGRDLTD-YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 231
Score = 130 bits (315), Expect = 9e-31
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 169 bits (412), Expect = 2e-42
Identities = 97/176 (55%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IVTNWDDMEKIW HTF NELR+APEEHPVLLTEAPLNPK+
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKS-----N 115
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYV IQAVLS TTGIVLD+GDGV+ P G P A
Sbjct: 116 REKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAI 175
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + Y+MKI G + + + VA +F E+A A
Sbjct: 176 QRLDLAGRDLTD-YMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAA 230
Score = 124 bits (299), Expect = 8e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +3
Query: 75 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 130 bits (315), Expect = 9e-31
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKI 325
+RGILTLKYPIEH IVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 130 bits (315), Expect = 9e-31
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKI 325
+RGILTLKYPIEH IVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 129 bits (312), Expect = 2e-30
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKI 325
+RGILTLKYPIEH IVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 129 bits (312), Expect = 2e-30
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQ 248
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS VGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 249 SK 254
SK
Sbjct: 61 SK 62
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDM 316
+RGILTLKYPIEH IVTNWDDM
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 125 bits (302), Expect = 3e-29
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Frame = +2
Query: 239 RGTEQRGILTLKYPIEHXIVTNWDDMEKIWXHTFX-NELRVAPEEHPVLLTEAPLNPKAQ 415
+ RG+ +++YP+EH IV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 416 KPXGGKEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRG 589
+ E +I F TFN PA+Y+ +QAVLS TTG+VLDSGDGV+ P +G
Sbjct: 120 R-----ERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKG 172
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQS 251
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D +G +A+S
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 101 bits (241), Expect = 8e-22
Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = +2
Query: 245 TEQRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNE-LRVAPEEHPVLLTEAPLNPKAQKP 421
++ R +L + YP+++ IV NWDDM +W HTF E L + P+E +LLTE PLNP + +
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR- 120
Query: 422 XGGKEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRG--TH 595
E M Q+MF + ++YVA+QAVL+ + TG+V+DSGDGV+ P G H
Sbjct: 121 ----EKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALH 176
Query: 596 SPTASWSGLGRSRSHRYLMKI 658
T GR + +YL+K+
Sbjct: 177 HLTRRLDIAGRDIT-KYLIKL 196
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSXVGDE 242
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 88.2 bits (209), Expect = 6e-18
Identities = 49/116 (42%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Frame = +2
Query: 266 TLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXMX 445
T+KYPI H IV +WD ME+ W LR PE+H LLTE PLN +E
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPE-----NREYTA 134
Query: 446 QIMFXTFNTPAMYVAIQAVLSC--------XRPVVTTGIVLDSGDGVSTPYPSTRG 589
+IMF +FN P +Y+A+QAVL+ TG+V+DSGDGV+ P G
Sbjct: 135 EIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADG 190
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 69 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/91 (36%), Positives = 53/91 (58%)
Frame = +2
Query: 281 IEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXMXQIMFX 460
++ ++ +W+ EKI H++ N L P EHPVL +E+ N +A+ +E + +IMF
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRAR-----REKLTEIMFE 148
Query: 461 TFNTPAMYVAIQAVLSCXRPVVTTGIVLDSG 553
F PA Y++ VLSC T G+++DSG
Sbjct: 149 KFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 278 PIEHXIVTNWDDMEKIWXHTF 340
PIE V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 278 PIEHXIVTNWDDMEKIWXHTF 340
PIE V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -1
Query: 259 TSLLCASSPTXESFCPIP-TITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAA 86
T L+ +SS + S + TITP +G+PT N S+P P + STT A
Sbjct: 463 TPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGAT 522
Query: 85 TSSS 74
+++S
Sbjct: 523 STAS 526
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 358 RPRGTPRPAH*GSPQPQGPKTXXGK 432
R RGTP PA G+P PQGP G+
Sbjct: 196 RSRGTPGPA--GAPGPQGPAGGPGQ 218
>U40800-14|AAA81498.4| 727|Caenorhabditis elegans Hypothetical
protein D2096.11 protein.
Length = 727
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 363 PRNTPSCSLRLPSTPRPKNPXGEKRX*XRSCSXHSTRPPCTSPSK 497
PR TP R+P TP K P + R S +S P +SPS+
Sbjct: 649 PRKTPQRPFRIPRTPSDKTPGRQSRVGCVSNLKNSIVEP-SSPSQ 692
>AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical
protein M116.5 protein.
Length = 1064
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 363 PRNTPSCSLRLPSTPRPKNPXGEKRX*XRSCSXHSTRPPCTSPSK 497
PR TP R+P TP K P + R S +S P +SPS+
Sbjct: 982 PRKTPQRPFRIPRTPSDKTPGRQSRVGCVSNLKNSIVEP-SSPSQ 1025
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 275 YPIEHXIVTN-WDDMEKIWXHTFXNELRVAPEEHP 376
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 275 YPIEHXIVTN-WDDMEKIWXHTFXNELRVAPEEHP 376
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 561 TPSPESSTIPVVTTGRXHESTAWMATYMAGVL 466
TP P SST+PVV + T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 470 TPAMYVAIQAVLSCXRPVVTTGIVL--DSGDGVSTPYPSTRGTHSPTA 607
TP V + A + PVVTT L S + T PST GT SPTA
Sbjct: 596 TPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGT-SPTA 642
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 470 TPAMYVAIQAVLSCXRPVVTTGIVL--DSGDGVSTPYPSTRGTHSPTA 607
TP V + A + PVVTT L S + T PST GT SPTA
Sbjct: 652 TPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGT-SPTA 698
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 358 RPRGTPRPAH*GSPQPQGPKTXXGK 432
R RGTP P+ G+P PQGP G+
Sbjct: 196 RSRGTPGPS--GAPGPQGPAGGPGQ 218
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 123 KAGFAGDDAPRAVFPSIVGRPRHQG 197
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,784,796
Number of Sequences: 27780
Number of extensions: 416275
Number of successful extensions: 1412
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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