Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0320
(826 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 182 2e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 177 7e-45
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 176 2e-44
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 174 5e-44
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 174 5e-44
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 174 5e-44
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 173 9e-44
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 173 9e-44
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 173 1e-43
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 156 2e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 153 1e-37
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 144 8e-35
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 103 2e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 89 4e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 75 8e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 58 5e-09
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 48 8e-06
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 45 7e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.13
At2g43945.1 68415.m05462 expressed protein 30 1.6
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 29 2.8
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 3.4
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 3.7
At5g51680.1 68418.m06407 hydroxyproline-rich glycoprotein family... 28 6.5
At1g13770.1 68414.m01616 expressed protein contains Pfam domain,... 28 6.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 106/185 (57%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IV+NWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 117
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATADPGV 784
GR + YLMKI G S + + +AL++ QEM TA+
Sbjct: 178 LRLDLAGRDLTD-YLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSS 236
Query: 785 PSXKS 799
KS
Sbjct: 237 SVEKS 241
Score = 107 bits (257), Expect = 9e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ VGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 177 bits (431), Expect = 7e-45
Identities = 104/185 (56%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IV NWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 117
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATADPGV 784
GR + +LMKI G S + + +AL+F QE+ T+
Sbjct: 178 LRLDLAGRDLTD-HLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSS 236
Query: 785 PSXKS 799
KS
Sbjct: 237 SVEKS 241
Score = 107 bits (257), Expect = 9e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ VGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 176 bits (428), Expect = 2e-44
Identities = 103/185 (55%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IV NWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 117
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFNTPAMYVAIQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATADPGV 784
GR + +LMKI G S + + +AL++ QE+ T+
Sbjct: 178 LRLDLAGRDLTD-HLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSS 236
Query: 785 PSXKS 799
KS
Sbjct: 237 SVEKS 241
Score = 107 bits (257), Expect = 9e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ VGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 174 bits (424), Expect = 5e-44
Identities = 99/176 (56%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH +V+NWDDMEKIW HTF NELR+APEEHPVLLTEAPLNPKA
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA-----N 117
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFN+PAMYVAIQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAI 177
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G + + VA+++ QEM T+
Sbjct: 178 LRLDLAGRDLTD-YLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETS 232
Score = 103 bits (246), Expect = 2e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+ VGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 174 bits (424), Expect = 5e-44
Identities = 99/176 (56%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH +V+NWDDMEKIW HTF NELR+APEEHPVLLTEAPLNPKA
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA-----N 117
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFN+PAMYVAIQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAI 177
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G + + VA+++ QEM T+
Sbjct: 178 LRLDLAGRDLTD-YLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETS 232
Score = 103 bits (246), Expect = 2e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+ VGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 174 bits (424), Expect = 5e-44
Identities = 99/176 (56%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH +V+NWDDMEKIW HTF NELR+APEEHPVLLTEAPLNPKA
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA-----N 117
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFN+PAMYVAIQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAI 177
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + YLMKI G + + VA+++ QEM T+
Sbjct: 178 LRLDLAGRDLTD-YLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETS 232
Score = 103 bits (246), Expect = 2e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+ VGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 173 bits (422), Expect = 9e-44
Identities = 100/176 (56%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IV NWDDMEKIW HTF NELRVAPEEHP+LLTEAPLNPKA
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA-----N 117
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFN PAMYVAIQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + LMKI G S + + +AL++ QE+ TA
Sbjct: 178 LRLDLAGRDLTDA-LMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETA 232
Score = 107 bits (257), Expect = 9e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ VGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 173 bits (422), Expect = 9e-44
Identities = 100/176 (56%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IV NWDDMEKIW HTF NELRVAPEEHP+LLTEAPLNPKA
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA-----N 117
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFN PAMYVAIQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + LMKI G S + + +AL++ QE+ TA
Sbjct: 178 LRLDLAGRDLTDA-LMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETA 232
Score = 107 bits (257), Expect = 9e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ VGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 173 bits (421), Expect = 1e-43
Identities = 101/176 (57%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGILTLKYPIEH IV+NWDDMEKIW HTF NELRVAPEEHPVLLTEAPLNPKA
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA-----N 117
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTA- 607
+E M QIMF TFN PAMYVAIQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 118 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
Query: 608 -SWSGLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
GR + LMKI G + + VAL++ QE+ TA
Sbjct: 178 LRLDLAGRDLTDS-LMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETA 232
Score = 107 bits (257), Expect = 9e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ VGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 156 bits (378), Expect = 2e-38
Identities = 87/175 (49%), Positives = 104/175 (59%), Gaps = 1/175 (0%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+RGIL+LKYPIEH +V+NWDDMEKIW HTF NELR+ PEEHP+LLTEAPLNPK
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKV-----N 118
Query: 431 KEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTAS 610
+E M QIMF +F P+MY+ IQAVLS TTGIVLDSGDGVS P G P A
Sbjct: 119 REKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 178
Query: 611 WS-GLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV*VALEFXQEMATA 772
L YL KI G + + + +A+++ QEM A
Sbjct: 179 LRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEKA 233
Score = 101 bits (241), Expect = 8e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQSK 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD+ VGDEAQ++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 153 bits (371), Expect = 1e-37
Identities = 82/140 (58%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Frame = +2
Query: 257 GILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKE 436
GILTL YP+EH +V+NWDDMEKIW HTF +ELRVAPEEHPVLLTEAPLNPKA +E
Sbjct: 20 GILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKAD-----RE 74
Query: 437 XMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTASWS 616
M QIMF TF P+MY+ +QA LS TTG VLDSGDGVS P G+ P A
Sbjct: 75 KMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILR 134
Query: 617 -GLGRSRSHRYLMKISPXAG 673
L YLMKI G
Sbjct: 135 LDLAGRHLTNYLMKIMMERG 154
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 144 bits (348), Expect = 8e-35
Identities = 89/196 (45%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Frame = +2
Query: 197 RDGRYGTEGLVRR*RGTEQRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHP 376
RDG E V G R ILTLK P+EH IV NWDDMEKIW +TF NELRV PEEHP
Sbjct: 35 RDGLNPNESYVGE-EGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 377 VLLTEAPLNPKAQKPXGGKEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGD 556
VLLTEAP NPKA +E M QIMF +F+ PAMYV++Q+VL TTG+VLD G+
Sbjct: 94 VLLTEAPYNPKA-----NREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGE 148
Query: 557 GVSTPYPSTRGTHSPTASWS-GLGRSRSHRYLMKISPXAGKSXXXXXXXXXXS*YQXEAV 733
VS P G P LG YL++I G + + +
Sbjct: 149 RVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLC 208
Query: 734 *VALEFXQEMATADPG 781
VAL++ QEM G
Sbjct: 209 YVALDYEQEMEKTTKG 224
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGDEAQS 251
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +S VG+E +
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 103 bits (246), Expect = 2e-22
Identities = 49/119 (41%), Positives = 70/119 (58%)
Frame = +2
Query: 245 TEQRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPX 424
+E R L + YP+ + IV NWDDME +W H F NEL++ P + +LLT+ PLNP
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSK---- 115
Query: 425 GGKEXMXQIMFXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSP 601
+E M + MF +N +++ IQAVL+ + TG+V+DSGDGV+ P G P
Sbjct: 116 -NREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFP 173
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSXVGD 239
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 88.6 bits (210), Expect = 4e-18
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = +2
Query: 269 LKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXMXQ 448
L YPIEH V +WD ME+ W N LR PE+H LLTE+PL P +E +
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPE-----SREYTGE 140
Query: 449 IMFXTFNTPAMYVAIQAVLSCXRPVVT-----TGIVLDSGDGVSTPYPSTRG 589
I+F TFN P +Y+A+ +VL+ T TG+V+D GDG + P G
Sbjct: 141 ILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEG 192
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 176
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 74.5 bits (175), Expect = 8e-14
Identities = 37/100 (37%), Positives = 57/100 (57%)
Frame = +2
Query: 278 PIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXMXQIMF 457
PI+ IV++WD ++ IW H F + L + P EHP+LL E PLN + Q +E ++MF
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQ-----REKAAELMF 148
Query: 458 XTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYP 577
+ PA+++A VL+ T +V+D G G +T P
Sbjct: 149 EKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISP 188
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 179
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +2
Query: 251 QRGILTLKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLNPKAQKPXGG 430
+R + + P + IVT+WD ++ +W H F N L + P EHP+LL E PLN + Q+ G
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREKSG 138
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 78 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 179
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 48.0 bits (109), Expect = 8e-06
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +2
Query: 278 PIEHXIVTNWDDMEKIWXHTFXNELRVAP-EEHPVLLTEAPLNPKAQKPXGGKEXMXQIM 454
PIE ++ +WD ME + + L E +L T+ PKA + E + Q+M
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIR-----EQLVQLM 111
Query: 455 FXTFNTPAMYVAIQAVLSCXRPVVTTGIVLDSGDGVSTPYPSTRGTHSPTAS 610
F TFN Y + QAVLS +G +D G G P G AS
Sbjct: 112 FETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIAS 163
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 269 LKYPIEHXIVTNWDDMEKIWXHTFXNELRVAPEEHPVLLTEAPLN-PKAQKPXGGKEXMX 445
++ PI+ + N D +IW H F + L +AP +LLTEAPL+ P Q+
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQR------TTD 114
Query: 446 QIMFXTFNTPAMYVA 490
+++F F ++Y+A
Sbjct: 115 ELVFEDFGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.30
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 185
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSXVGD 239
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 34.7 bits (76), Expect = 0.075
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 278 PIEHXIVTNWDDMEKIWXHTFXN-ELRVAPEEHPVLLTEAPLNPKAQKPXGGKEXMXQIM 454
P + +V ++ ME I + F + +HP+L+TE N P + M +++
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACN-----PVQSRSKMAELL 139
Query: 455 FXTFNTPAMYVAIQAVLS 508
F T+ PA+ + A S
Sbjct: 140 FETYGVPAVAFGVDAAFS 157
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 214 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 77
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At2g43945.1 68415.m05462 expressed protein
Length = 289
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 330 IIPSXMSCVSPPRNTPSCSLRLPSTPRPKNPXGEKRX*XRSC 455
++P S +SPP P S PS+ R KNP ++R SC
Sbjct: 10 LLPLTTSLISPPPPPPD-SFHAPSSFRSKNPNFKRRLSSSSC 50
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 372 TPSCSLRLPSTPRPKNP 422
TP+ LRLPS P+P NP
Sbjct: 1322 TPASQLRLPSDPQPSNP 1338
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 3.4
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 190 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 104
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.4 bits (43), Expect(2) = 3.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 379 DGVFLGGDTQLIXEGMXPNLLHVIPVS 299
DGV +GG + + E + ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 333 IPSXMSCVSPPRNTPSCSLRLPSTPRPKNP 422
+PS VSPP TP+ S+ P+ P P +P
Sbjct: 144 VPSPTPPVSPPPPTPTPSVPSPTPPVPTDP 173
>At5g51680.1 68418.m06407 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; similar to hydroxyproline-rich
Glycoprotein (HRGP) [Zea mays] gi|4007865|emb|CAA10387
Length = 343
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 806 FXKTSXRELLDQPLPSPXRIR--EXLTQLXXDITNDS 702
F TS ELLDQPLP P E + + D ++DS
Sbjct: 129 FVDTSPPELLDQPLPPPPMYGDVETSSDIFDDASSDS 165
>At1g13770.1 68414.m01616 expressed protein contains Pfam domain,
PF04884: Protein of unknown function, DUF647; contains
non-consensus (GC) splice site at intron 2
Length = 440
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 519 GRXHESTAWMATYMAGVLNVSNMIWXIXS--FPPXGFWALGLRGASVSRTGCSSGATRSS 346
G +S A M +A ++N M+ + S FP + L S S TG +SGATR++
Sbjct: 134 GSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATRAA 193
Query: 345 L 343
L
Sbjct: 194 L 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,097,781
Number of Sequences: 28952
Number of extensions: 400553
Number of successful extensions: 1125
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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