Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0319
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 123 1e-28
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 123 1e-28
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 123 1e-28
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 123 1e-28
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 123 1e-28
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 123 1e-28
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 123 1e-28
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 123 1e-28
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 123 1e-28
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 123 1e-28
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 123 1e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 110 1e-24
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 110 1e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 109 3e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 109 3e-24
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 76 2e-14
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 58 6e-09
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 58 8e-09
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 40 0.002
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.051
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.051
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 30 1.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Score = 117 bits (281), Expect = 1e-26
Identities = 73/146 (50%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQRTLM*EMR 278
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG V +G + E +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 HRAXXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSXWXPFSPTEAPLNP 458
+ M + + V+P + P TEAPLNP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEH------PVLLTEAPLNP 113
Query: 459 KXNREKMTQIHVLXIQQPAMYVAIQS 536
K NREKMTQI PAMYVAIQ+
Sbjct: 114 KANREKMTQIMFETFNTPAMYVAIQA 139
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTG+VLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 670 RXLTD 684
R LTD
Sbjct: 184 RDLTD 188
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Score = 116 bits (278), Expect = 2e-26
Identities = 72/146 (49%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQRTLM*EMR 278
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG V +G + E +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 HRAXXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSXWXPFSPTEAPLNP 458
+ M + + V+P + P TEAPLNP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEH------PVLLTEAPLNP 113
Query: 459 KXNREKMTQIHVLXIQQPAMYVAIQS 536
K NREKMTQI PAMYVAIQ+
Sbjct: 114 KANREKMTQIMFETFNTPAMYVAIQA 139
Score = 87.8 bits (208), Expect = 7e-18
Identities = 45/65 (69%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTGIVLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 670 RXLTD 684
R LTD
Sbjct: 184 RDLTD 188
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Score = 117 bits (281), Expect = 1e-26
Identities = 73/146 (50%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQRTLM*EMR 278
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG V +G + E +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 HRAXXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSXWXPFSPTEAPLNP 458
+ M + + V+P + P TEAPLNP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEH------PVLLTEAPLNP 113
Query: 459 KXNREKMTQIHVLXIQQPAMYVAIQS 536
K NREKMTQI PAMYVAIQ+
Sbjct: 114 KANREKMTQIMFETFNTPAMYVAIQA 139
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTG+VLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 670 RXLTD 684
R LTD
Sbjct: 184 RDLTD 188
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Score = 117 bits (281), Expect = 1e-26
Identities = 73/146 (50%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQRTLM*EMR 278
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG V +G + E +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 HRAXXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSXWXPFSPTEAPLNP 458
+ M + + V+P + P TEAPLNP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEH------PVLLTEAPLNP 113
Query: 459 KXNREKMTQIHVLXIQQPAMYVAIQS 536
K NREKMTQI PAMYVAIQ+
Sbjct: 114 KANREKMTQIMFETFNTPAMYVAIQA 139
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTG+VLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 670 RXLTD 684
R LTD
Sbjct: 184 RDLTD 188
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Score = 117 bits (281), Expect = 1e-26
Identities = 73/146 (50%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQRTLM*EMR 278
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG V +G + E +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 HRAXXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSXWXPFSPTEAPLNP 458
+ M + + V+P + P TEAPLNP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEH------PVLLTEAPLNP 113
Query: 459 KXNREKMTQIHVLXIQQPAMYVAIQS 536
K NREKMTQI PAMYVAIQ+
Sbjct: 114 KANREKMTQIMFETFNTPAMYVAIQA 139
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTG+VLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 670 RXLTD 684
R LTD
Sbjct: 184 RDLTD 188
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Score = 114 bits (274), Expect = 7e-26
Identities = 70/146 (47%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQRTLM*EMR 278
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG V +G + E +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 HRAXXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSXWXPFSPTEAPLNP 458
+ M + + V+P + P TEAPLNP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEH------PVLLTEAPLNP 113
Query: 459 KXNREKMTQIHVLXIQQPAMYVAIQS 536
K NREKMTQI PAMYVAIQ+
Sbjct: 114 KANREKMTQIMFETFNTPAMYVAIQA 139
Score = 87.8 bits (208), Expect = 7e-18
Identities = 45/65 (69%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTGIVLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 670 RXLTD 684
R LTD
Sbjct: 184 RDLTD 188
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Score = 117 bits (281), Expect = 1e-26
Identities = 73/146 (50%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQRTLM*EMR 278
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG V +G + E +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 HRAXXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSXWXPFSPTEAPLNP 458
+ M + + V+P + P TEAPLNP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEH------PVLLTEAPLNP 113
Query: 459 KXNREKMTQIHVLXIQQPAMYVAIQS 536
K NREKMTQI PAMYVAIQ+
Sbjct: 114 KANREKMTQIMFETFNTPAMYVAIQA 139
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTG+VLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 670 RXLTD 684
R LTD
Sbjct: 184 RDLTD 188
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 62
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTG+VLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 80 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 139
Query: 670 RXLTD 684
R LTD
Sbjct: 140 RDLTD 144
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +3
Query: 426 PFSPTEAPLNPKXNREKMTQIHVLXIQQPAMYVAIQS 536
P TEAPLNPK NREKMTQI PAMYVAIQ+
Sbjct: 59 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 95
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 92
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTG+VLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 110 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 169
Query: 670 RXLTD 684
R LTD
Sbjct: 170 RDLTD 174
Score = 78.6 bits (185), Expect = 4e-15
Identities = 55/128 (42%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Frame = +3
Query: 159 KAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQRTLM*EMRHRAXXXXXXXXXXXXXXX 332
+AGFAGDDAPRAVFPSIVGRPRHQG V +G + E + +
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 333 XLTGMTWRRFGIIPSTMSCVSPPRNTQSXWXPFSPTEAPLNPKXNREKMTQIHVLXIQQP 512
M + + V+P + P TEAPLNPK NREKMTQI P
Sbjct: 65 NWDDMEKIWHHTFYNELR-VAPEEH------PVLLTEAPLNPKANREKMTQIMFETFNTP 117
Query: 513 AMYVAIQS 536
AMYVAIQ+
Sbjct: 118 AMYVAIQA 125
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 123 bits (297), Expect = 1e-28
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV L
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Score = 117 bits (281), Expect = 1e-26
Identities = 73/146 (50%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG--VMVGMGQRTLM*EMR 278
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG V +G + E +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 HRAXXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSXWXPFSPTEAPLNP 458
+ M + + V+P + P TEAPLNP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEH------PVLLTEAPLNP 113
Query: 459 KXNREKMTQIHVLXIQQPAMYVAIQS 536
K NREKMTQI PAMYVAIQ+
Sbjct: 114 KANREKMTQIMFETFNTPAMYVAIQA 139
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTG+VLDSGDGV HTV IY GYAL LRL+ G
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 670 RXLTD 684
R LTD
Sbjct: 184 RDLTD 188
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPV L
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLL 105
Score = 103 bits (248), Expect = 1e-22
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +3
Query: 111 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 83.8 bits (198), Expect = 1e-16
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF TFN+P +AVLSLYASGRTTGIVLD+GDGV HTV IY GYAL RL+ G
Sbjct: 123 MFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAG 182
Query: 670 RXLTD 684
R LTD
Sbjct: 183 RDLTD 187
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +3
Query: 426 PFSPTEAPLNPKXNREKMTQIHVLXIQQPAMYVAIQS 536
P TEAPLNPK NREKMTQI PAMYV IQ+
Sbjct: 102 PVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQA 138
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 110 bits (264), Expect = 1e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKI 361
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 110 bits (264), Expect = 1e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKI 361
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 109 bits (261), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKI 361
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 109 bits (261), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +2
Query: 248 GTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDM 352
G +DSYVGDEAQS RGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 76.2 bits (179), Expect = 2e-14
Identities = 30/56 (53%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 DSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVPL 421
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPV L
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/64 (53%), Positives = 43/64 (67%)
Frame = +1
Query: 493 FXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXGR 672
F TFN P +AVLSLYA+GRTTG+VLDSGDGV H V I G+A+ R++ GR
Sbjct: 128 FETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGR 187
Query: 673 XLTD 684
+T+
Sbjct: 188 DVTE 191
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 245
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 426 PFSPTEAPLNPKXNREKMTQIHVLXIQQPAMYVAIQS 536
P T+APLNP NRE+ +I PA+Y+ +Q+
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQA 142
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 257 DSYVGDEAQSXRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 409
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRT--------TGIVLDSGDGVFHTVXIYVGYALXPR 645
MF +FN P +AVL+L AS + TG+V+DSGDGV H + + GY +
Sbjct: 137 MFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSC 196
Query: 646 HLRLEXXGRXLT 681
+ GR +T
Sbjct: 197 IKHIPIAGRDIT 208
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 105 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 212
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 429 FSPTEAPLNPKXNREKMTQIHVLXIQQPAMYVAIQS 536
F TE PLN NRE +I P +Y+A+Q+
Sbjct: 117 FLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQA 152
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 233 RDGRYGTEDSYVGDEAQSXRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEE 406
R G +D VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKE 104
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 532 KAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXGRXLT 681
+AVL+LYA G TG+V+DSGDGV H +Y G+AL RL+ GR +T
Sbjct: 141 QAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDIT 190
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 221
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 438 TEAPLNPKXNREKMTQIHVLXIQQPAMYVAIQS 536
TE PLNP NREKM Q+ ++YVA+Q+
Sbjct: 110 TEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQA 142
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 490 MFXTFNSPPCTSPSKAVLSLYASGRTTGIVLDSGDGVFHTVXIYVGYALXPRHLRLEXXG 669
MF F P VLS +A GRT G+++DSG V ++ GYA+ ++ G
Sbjct: 146 MFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGG 205
Query: 670 RXLTD 684
+T+
Sbjct: 206 DLITE 210
Score = 34.3 bits (75), Expect = 0.088
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 317 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 415
++ G++ +W+ EKI H++ N L P EHPV
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPV 126
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 212
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 263 YVGDEAQSXRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 376
+V E + +L Y PIE G V NWD ++IW TF
Sbjct: 43 FVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 263 YVGDEAQSXRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 376
+V E + +L Y PIE G V NWD ++IW TF
Sbjct: 43 FVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 329 IVTNWDDMEKIWHHTFYNELRVAPEEHPVPL 421
++ NWD EK W TF+ L+ E P+PL
Sbjct: 382 VLQNWDQTEKDWSPTFWFLLKCI-REMPIPL 411
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 599 TPSPESSTIPVVRPDAYSESTALDG 525
TP P SST+PVV P ++ T G
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTG 889
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 159 KAGFAGDDAPRAVFPSIVGRPRHQG 233
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,912,436
Number of Sequences: 27780
Number of extensions: 346369
Number of successful extensions: 1088
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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