Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0315
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000155F437 Cluster: PREDICTED: similar to Mitogen ac...    35   1.2  
UniRef50_UPI0000F1F986 Cluster: PREDICTED: similar to mixed line...    32   6.5  
UniRef50_Q16584 Cluster: Mitogen-activated protein kinase kinase...    32   8.6  

>UniRef50_UPI000155F437 Cluster: PREDICTED: similar to Mitogen
           activated protein kinase kinase kinase 11; n=1; Equus
           caballus|Rep: PREDICTED: similar to Mitogen activated
           protein kinase kinase kinase 11 - Equus caballus
          Length = 736

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +2

Query: 338 SAAGXW---RPKXNARRSLSSLAVFDYGFGXPPPQGXDELXXRXXEIXEXLSXDANISGD 508
           S+ G W    PK  A  +    A+FDY      P G DEL  R  +  E LS DA ISGD
Sbjct: 27  SSGGGWPEGSPKAAAYANPVWTALFDY-----EPSGQDELALRKGDRVEVLSRDAAISGD 81


>UniRef50_UPI0000F1F986 Cluster: PREDICTED: similar to mixed lineage
           kinase 4 (KIAA1804); n=1; Danio rerio|Rep: PREDICTED:
           similar to mixed lineage kinase 4 (KIAA1804) - Danio
           rerio
          Length = 976

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 19/38 (50%), Positives = 21/38 (55%)
 Frame = +2

Query: 395 AVFDYGFGXPPPQGXDELXXRXXEIXEXLSXDANISGD 508
           AVFDY        G DEL  R  ++ E LS DA ISGD
Sbjct: 45  AVFDY-----EASGEDELSLRRGDVVEVLSKDAAISGD 77


>UniRef50_Q16584 Cluster: Mitogen-activated protein kinase kinase
           kinase 11; n=15; Mammalia|Rep: Mitogen-activated protein
           kinase kinase kinase 11 - Homo sapiens (Human)
          Length = 847

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 19/38 (50%), Positives = 21/38 (55%)
 Frame = +2

Query: 395 AVFDYGFGXPPPQGXDELXXRXXEIXEXLSXDANISGD 508
           A+FDY      P G DEL  R  +  E LS DA ISGD
Sbjct: 48  ALFDY-----EPSGQDELALRKGDRVEVLSRDAAISGD 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,063,458
Number of Sequences: 1657284
Number of extensions: 5277610
Number of successful extensions: 8462
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8462
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)