Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0314
(881 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 60 3e-09
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 52 5e-07
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 50 3e-06
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 48 8e-06
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 40 0.002
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 39 0.005
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 37 0.025
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 36 0.033
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 35 0.076
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 35 0.10
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_2430| Best HMM Match : 7tm_1 (HMM E-Value=1e-06) 28 8.7
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/91 (35%), Positives = 47/91 (51%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTDLEDSGFXKFWGRN 435
+ I+AFFGCCGA KEN CM+ F + LLI+ E+A + GY+ ++ +
Sbjct: 417 ITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQSD-----LTDD 471
Query: 436 LNASITXYPVDKNVQKTIDIIPTDXXAAGIK 528
+ +I YP KN + ID + D G K
Sbjct: 472 IIRNIKEYP--KNNKAAIDAMQMDFECCGAK 500
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 59.3 bits (137), Expect = 4e-09
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = +1
Query: 253 YVFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTDLEDSGFXKFWGR 432
++ +V+FFGCCGA+KE+ C++ TF L II E+ GY+ +E+ G+
Sbjct: 335 FIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQ-----LGK 389
Query: 433 NLNASITXY--PVDKNVQKTIDIIPTDXXAAGIKQSGRLGRSRSAHTEHVLAPXQEIXDX 606
++N +I Y + + D I GI RS H + P
Sbjct: 390 DMNDTIVSYGEKGKEGITDAYDAIQKKEKCCGINGFKDWQRSYYTKGNHSIVP-DSCCKT 448
Query: 607 VVAGCTEN--STNFHSXGC 657
V GC N + ++ GC
Sbjct: 449 VSKGCGINFKENDIYTKGC 467
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 53.2 bits (122), Expect = 3e-07
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTDLEDSGFXKFWGRN 435
+FI+ F GC GA++EN C++ FSV L IIF +LA+G+ ++ +E K
Sbjct: 57 MFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVEK----- 111
Query: 436 LNASITXYPVDKNVQKTIDIIPTDXXAAGIK 528
L ++T Y + ++Q ID + + G K
Sbjct: 112 LQTAVTKYRDNADLQNLIDGVQQEFKCCGAK 142
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 52.4 bits (120), Expect = 5e-07
Identities = 30/89 (33%), Positives = 47/89 (52%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTDLEDSGFXKFWGRN 435
+ +VAF GCCGA KEN CM+ F FLL++ + E+ G Y +E+ ++
Sbjct: 64 IALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALAYNNKDKIENR-----LDKD 118
Query: 436 LNASITXYPVDKNVQKTIDIIPTDXXAAG 522
+ +I YP KN +K+I+ + T G
Sbjct: 119 ILKAIENYP-GKN-EKSINDMQTKFKCCG 145
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 65 MALEGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLII 244
MAL+G + VK L+ FN +F + GLI+ VGI A Y+ N Y P V+I
Sbjct: 1 MALQGSSNIVKILVIIFNFIFFLFGLILFGVGIWASTKLGAYVEIASVN-YATGPRVVIA 59
Query: 245 VGIM 256
VG +
Sbjct: 60 VGFI 63
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 52.4 bits (120), Expect = 5e-07
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGY 381
+ IV+FFGC GA KEN CM+ TF V LLI+ E+A + Y
Sbjct: 66 IAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAY 107
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 77 GGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIM 256
G +K L+ FN+LF I G+ ++ VG AE+ ++ + Y ++I VG++
Sbjct: 7 GAGRILKILVVFFNVLFFIFGIALIAVGAWAEVQYGEFIEVSSVP-YATGSRLVIAVGVI 65
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTDLEDSGFXKFWGRN 435
++++ FFGC GA+KEN + ++ +F+ + +A G+ +++ L D
Sbjct: 83 LYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDP------KAR 136
Query: 436 LNASITXYPVDKNVQKTIDIIPTDXXAAGIK 528
L + Y D + Q+ ID I T GI+
Sbjct: 137 LEDGLKSYQQDSSKQEFIDFIQTRFKCCGIE 167
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 48.4 bits (110), Expect = 8e-06
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Frame = +1
Query: 262 IVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTDLEDSGFXKFWGRNLN 441
IVAF CCGA+KE+ CM+ T+ + IF E+ + Y+ +E K ++
Sbjct: 71 IVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIE-----KNLHGDIR 125
Query: 442 ASITXYPVDKN--VQKTIDIIPTDXXAAGIKQSGRLGRSRSAHTEHVLAPXQEIXDXVVA 615
+++ Y + + V + ID I D G Q ++ A T + P D +
Sbjct: 126 STMNEYHLSGHDAVTRAIDEIHRDFKCCGNAQYRDWFETKWAKTHPDMVPRSCCKDPSDS 185
Query: 616 GCTEN----STNFHSXGC 657
C EN T + GC
Sbjct: 186 KCNENISKDPTKIYRRGC 203
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +2
Query: 65 MALEGGMSCVKYLMFCFNLLFAITGLIILIVGI-----RAEINSYPYMNFTDENFYKFAP 229
M+ + G C+K+++F FNLLF + G I +G+ + E+ + Y T YK AP
Sbjct: 1 MSTDWGFKCIKFMVFFFNLLFLLAGCAIFAIGVWIISSKDEV-AGDYSRLTGTINYKTAP 59
Query: 230 IVLIIVGIM 256
I+ I++GI+
Sbjct: 60 ILCIVIGIV 68
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 253 YVFIVAFFGCCGAVKENHCMIXT 321
+V V FFGCCGAVKE+ CM+ T
Sbjct: 323 FVTFVGFFGCCGAVKESRCMLAT 345
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTDL 399
V IV GC +KEN ++ ++ + L++IF+ E+A G+ + +++
Sbjct: 70 VIIVCVVGCVAVIKENRFILVSYLIMLVLIFILEIATGVVAVIYRSEI 117
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 39.1 bits (87), Expect = 0.005
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGY 381
+F + FFGC GA++EN C + + + + + +A G Y
Sbjct: 88 MFFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAY 129
Score = 32.7 bits (71), Expect = 0.40
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 89 CVKYLMFCFNLLFAITGLIILIVGI 163
C KY +F N++F I GL+++ VG+
Sbjct: 27 CTKYTLFFINVIFFILGLLVMTVGV 51
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 37.9 bits (84), Expect = 0.011
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTDLEDSGFXKFWGRN 435
+F++ FGC GA++EN C++ + II + G G+ LE +
Sbjct: 114 LFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKVTAQ----- 168
Query: 436 LNASITXY--PVDKNVQKTIDIIPTDXXAAGIK 528
L +I Y P ++ ID + T+ G++
Sbjct: 169 LKDAIVLYRDPTKGDLHLIIDTVQTELQCCGVQ 201
Score = 35.9 bits (79), Expect = 0.043
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 89 CVKYLMFCFNLLFAITGLIILIVGIRAEIN-SYPYMNFTDENFYKFAPIVLIIVGIMF 259
CVKY +F N++F + G +IL VGI I D NF A I L + G++F
Sbjct: 59 CVKYSLFTINVIFWLAGAVILAVGIFIFIEMKEEITKLADLNFQP-AVIFLALGGLLF 115
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 36.7 bits (81), Expect = 0.025
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSV 330
+ I+ F GCCGA+KE+ C++ T S+
Sbjct: 85 IAIIGFIGCCGALKEHTCLLKTVSI 109
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 116 NLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIM 256
+L+F + GL +L VGI A I YM + + Y A +LI +G +
Sbjct: 39 HLVFQLMGLSVLAVGIWARIQFSDYMKLSSHD-YATAAYILIGIGFL 84
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 36.3 bits (80), Expect = 0.033
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 86 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIM 256
+C+KY++F N++F + G++IL++G N D Y+ +V++IVGI+
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWNL-DSILYE-PSVVILIVGIL 91
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTD 396
+F++A GC GA++EN ++ + + + + ++ GIA YM H D
Sbjct: 92 LFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYM-HQD 137
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 36.3 bits (80), Expect = 0.033
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 86 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLIIVGIM 256
+C+KY++F N++F + G++IL++G N D Y+ +V++IVGI+
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWNL-DSILYE-PSVVILIVGIL 91
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTD 396
+F++A GC GA++EN ++ + + + + ++ G A Y+ H D
Sbjct: 92 LFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYI-HRD 137
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 36.3 bits (80), Expect = 0.033
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMI 315
+ +++FFGCCGA+KE+ C++
Sbjct: 36 IALISFFGCCGAIKESRCLL 55
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 35.1 bits (77), Expect = 0.076
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFS 327
V + F GCCGAVKEN C + S
Sbjct: 209 VMFIGFVGCCGAVKENKCFLLLVS 232
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 80 GMSCVKYLMFCFNLLFAITGLI 145
GM C+KYL+F FN +F + +I
Sbjct: 76 GMQCMKYLLFAFNFVFWCSKII 97
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 34.7 bits (76), Expect = 0.10
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 256 VFIVAFFGCCGAVKENHCMIXTFSVFL 336
+ I+ F GCCGA+KE+ C++ T L
Sbjct: 227 IAIIGFIGCCGALKEHTCLLKTIKTGL 253
>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Frame = +1
Query: 238 HHCR----HYVFIVAFF---GC---CGAVKENHCMIXTFSVFLLIIFVAELAVGI 372
H CR H+++ F GC C + N C++ T+ F+LI+ VAE+ + +
Sbjct: 13 HGCRTARAHFIYASDLFASAGCLGVCALLYMNPCLLKTYFSFMLILVVAEVTIAV 67
>SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 678
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 127 CHYGIDHPDSWHQG*NKLVSLHELHR*ELLQVRSDRSHH 243
C+Y + PD+W + + SL R E++ R S+H
Sbjct: 120 CYYSLQPPDNWDKKKTSIQSLCSRERKEVITSRYQTSNH 158
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 177 FISALMPTIRMINPVMANRRLKQNMRYF 94
FI+ALM I +I +M + L++ M YF
Sbjct: 39 FITALMGNIILITVIMKTKSLRRTMNYF 66
>SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = +1
Query: 229 DRSHHCRHYVFIVAFFGCCGAVKENHCMIXTFSVFLLIIFVAELAVGIAGYMKHTDLEDS 408
+RS H + + F G + HC T + + I + +GI GY+ +L
Sbjct: 276 ERSSHIKFVEVLSNFSGRLPPIVI-HCFTGTKAEMIAYIAMG-FYIGITGYICKANLISP 333
Query: 409 GFXKFWGRNLNASITXYPVDK 471
+ G+NL +I P+D+
Sbjct: 334 PYLDTAGKNLREAIIDCPLDR 354
>SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 839
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 169 SPDANYQDDQSRNGKQKIEAKHEVLYTG---HSTFESHC 62
SP ++ RNG+ K+E+ YTG H+ +SHC
Sbjct: 22 SPLHAHKQSHCRNGEPKVESNKVQYYTGSPLHAHKQSHC 60
>SB_2430| Best HMM Match : 7tm_1 (HMM E-Value=1e-06)
Length = 439
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 331 FLLIIFVAELAVGIAGYMKHTDLEDSGFXKFW 426
F+L + VA+L VGI+G + H D+ KFW
Sbjct: 51 FVLSMTVADLQVGISGILYHLDI----IYKFW 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,374,697
Number of Sequences: 59808
Number of extensions: 505588
Number of successful extensions: 1366
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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