Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0311
(893 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 159 7e-38
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 150 4e-35
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 143 5e-33
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 136 5e-31
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 135 2e-30
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 124 2e-27
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 121 2e-26
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 119 1e-25
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 116 8e-25
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 107 5e-22
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 106 7e-22
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 102 1e-20
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 100 1e-19
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 100 1e-19
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 100 1e-19
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 98 2e-19
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 98 2e-19
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 97 4e-19
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 94 4e-18
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 93 7e-18
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 93 9e-18
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 93 1e-17
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 92 2e-17
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 90 6e-17
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 90 8e-17
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 87 8e-16
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 87 8e-16
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 86 1e-15
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 86 1e-15
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 86 1e-15
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 84 4e-15
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 84 5e-15
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 83 7e-15
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 83 1e-14
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 82 2e-14
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 81 3e-14
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 81 3e-14
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 81 4e-14
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 81 5e-14
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 81 5e-14
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 80 7e-14
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 79 1e-13
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 2e-13
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 78 3e-13
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 78 3e-13
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 78 3e-13
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 78 3e-13
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 77 5e-13
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 77 5e-13
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 77 5e-13
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 77 6e-13
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 77 6e-13
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 77 8e-13
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 76 1e-12
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 76 1e-12
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 76 1e-12
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 76 1e-12
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 76 1e-12
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 75 2e-12
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 75 2e-12
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 75 2e-12
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 75 3e-12
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 3e-12
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 74 4e-12
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 74 4e-12
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 74 4e-12
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 74 4e-12
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 74 6e-12
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 73 8e-12
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 73 8e-12
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 73 1e-11
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 73 1e-11
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 73 1e-11
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 73 1e-11
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 73 1e-11
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 72 2e-11
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 71 3e-11
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 71 4e-11
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 71 4e-11
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 71 5e-11
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 71 5e-11
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 70 7e-11
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 70 7e-11
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 70 9e-11
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 70 9e-11
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 69 1e-10
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 69 1e-10
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 1e-10
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 69 2e-10
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 69 2e-10
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 69 2e-10
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 69 2e-10
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 69 2e-10
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 68 3e-10
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 68 4e-10
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 68 4e-10
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 67 5e-10
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 67 5e-10
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 67 5e-10
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 67 5e-10
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 67 7e-10
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 67 7e-10
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 67 7e-10
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 66 9e-10
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 66 9e-10
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 66 9e-10
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 66 1e-09
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 66 1e-09
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 66 1e-09
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 66 2e-09
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-09
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-09
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 65 2e-09
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 65 2e-09
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 3e-09
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 65 3e-09
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 65 3e-09
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 65 3e-09
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 65 3e-09
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 64 3e-09
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 64 3e-09
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 64 3e-09
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 64 3e-09
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 64 3e-09
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 64 5e-09
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 64 5e-09
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 64 5e-09
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 64 6e-09
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 63 8e-09
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 63 8e-09
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 63 8e-09
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 63 8e-09
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 63 8e-09
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 63 8e-09
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 63 8e-09
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 63 8e-09
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 63 1e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 62 1e-08
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 62 1e-08
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 62 1e-08
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 62 2e-08
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 62 2e-08
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 62 2e-08
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 62 2e-08
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 2e-08
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 2e-08
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 62 2e-08
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 62 2e-08
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 62 2e-08
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 62 2e-08
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 62 2e-08
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 61 3e-08
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 61 3e-08
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 61 3e-08
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 61 3e-08
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 61 4e-08
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 61 4e-08
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 61 4e-08
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 4e-08
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 61 4e-08
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 61 4e-08
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 61 4e-08
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 61 4e-08
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 61 4e-08
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 61 4e-08
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 61 4e-08
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 61 4e-08
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 61 4e-08
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 61 4e-08
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 60 6e-08
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 60 6e-08
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 60 6e-08
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 60 6e-08
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 60 6e-08
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 60 6e-08
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 60 7e-08
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 60 7e-08
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 60 7e-08
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 60 7e-08
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 60 7e-08
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 60 7e-08
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 60 1e-07
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 60 1e-07
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 60 1e-07
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 1e-07
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 60 1e-07
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 60 1e-07
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 60 1e-07
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 1e-07
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 59 1e-07
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 59 1e-07
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 59 1e-07
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 59 1e-07
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 59 2e-07
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 59 2e-07
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 59 2e-07
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 59 2e-07
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 59 2e-07
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 59 2e-07
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 59 2e-07
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 58 2e-07
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 58 2e-07
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 58 2e-07
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 58 2e-07
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 58 2e-07
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 58 3e-07
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 58 3e-07
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 58 3e-07
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 58 3e-07
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 58 3e-07
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 58 3e-07
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 58 3e-07
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 58 4e-07
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 58 4e-07
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 4e-07
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 58 4e-07
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 58 4e-07
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 58 4e-07
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 57 5e-07
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 5e-07
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 57 5e-07
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 57 5e-07
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 57 5e-07
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 57 5e-07
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 57 7e-07
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 57 7e-07
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 57 7e-07
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 57 7e-07
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 57 7e-07
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 9e-07
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 56 9e-07
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 56 9e-07
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 56 9e-07
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 56 9e-07
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 56 9e-07
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 56 9e-07
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 56 9e-07
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 56 9e-07
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 56 9e-07
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 56 1e-06
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 56 1e-06
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 56 1e-06
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 56 1e-06
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 56 1e-06
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 56 1e-06
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 56 1e-06
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 56 1e-06
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 56 1e-06
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 56 1e-06
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 56 2e-06
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 56 2e-06
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 56 2e-06
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 56 2e-06
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 56 2e-06
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 56 2e-06
UniRef50_A5KC62 Cluster: DEAD/DEAH box helicase, putative; n=10;... 56 2e-06
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 56 2e-06
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 56 2e-06
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 56 2e-06
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 56 2e-06
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 55 2e-06
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 55 2e-06
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 55 2e-06
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 55 2e-06
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 55 2e-06
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 55 2e-06
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 55 2e-06
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 55 2e-06
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 55 2e-06
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 55 2e-06
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 55 2e-06
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 55 2e-06
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 55 2e-06
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 55 2e-06
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 55 3e-06
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 55 3e-06
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 55 3e-06
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 55 3e-06
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 55 3e-06
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 55 3e-06
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 55 3e-06
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 55 3e-06
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 55 3e-06
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 55 3e-06
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 55 3e-06
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-06
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 55 3e-06
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 55 3e-06
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1... 55 3e-06
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 55 3e-06
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 55 3e-06
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 54 4e-06
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 54 4e-06
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833; ... 54 4e-06
UniRef50_A7U5X0 Cluster: DEAD-box helicase 10; n=2; Plasmodium f... 54 4e-06
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 54 4e-06
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 54 5e-06
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 54 5e-06
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 54 5e-06
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 54 5e-06
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 54 5e-06
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 54 5e-06
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 54 5e-06
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 54 5e-06
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 54 5e-06
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 54 5e-06
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 54 5e-06
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 54 5e-06
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 54 5e-06
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 54 6e-06
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 54 6e-06
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 54 6e-06
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 54 6e-06
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 6e-06
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 54 6e-06
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 54 6e-06
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 54 6e-06
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 6e-06
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 54 6e-06
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 54 6e-06
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 54 6e-06
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 54 6e-06
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 54 6e-06
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 54 6e-06
UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5; S... 54 6e-06
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 9e-06
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 53 9e-06
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 53 9e-06
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 53 9e-06
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 53 9e-06
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 53 9e-06
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 53 9e-06
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 53 9e-06
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 53 9e-06
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 53 1e-05
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 53 1e-05
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 53 1e-05
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 53 1e-05
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 1e-05
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 53 1e-05
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 53 1e-05
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 53 1e-05
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 53 1e-05
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 53 1e-05
UniRef50_Q0CF43 Cluster: ATP-dependent RNA helicase dbp7; n=10; ... 53 1e-05
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 52 2e-05
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 52 2e-05
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 52 2e-05
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 52 2e-05
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 52 2e-05
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 52 2e-05
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 52 2e-05
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 52 2e-05
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 52 2e-05
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 52 2e-05
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 52 2e-05
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 52 2e-05
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 52 2e-05
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 52 2e-05
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 52 2e-05
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 52 2e-05
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 52 2e-05
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 52 2e-05
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 52 2e-05
UniRef50_UPI0000DB72AE Cluster: PREDICTED: similar to CG9143-PA;... 52 3e-05
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 52 3e-05
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 52 3e-05
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 52 3e-05
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 52 3e-05
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 52 3e-05
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 52 3e-05
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 52 3e-05
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 52 3e-05
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 52 3e-05
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 52 3e-05
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 51 3e-05
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 51 3e-05
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 51 3e-05
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 51 3e-05
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 51 3e-05
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 51 3e-05
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 51 3e-05
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 51 3e-05
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 51 3e-05
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 51 3e-05
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 51 3e-05
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 51 3e-05
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 51 3e-05
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 51 3e-05
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 51 3e-05
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 51 3e-05
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 51 5e-05
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 51 5e-05
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 51 5e-05
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 51 5e-05
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 51 5e-05
UniRef50_A0DXN3 Cluster: Chromosome undetermined scaffold_69, wh... 51 5e-05
UniRef50_Q4RM08 Cluster: Chromosome 10 SCAF15019, whole genome s... 50 6e-05
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 50 6e-05
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 50 6e-05
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 50 6e-05
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 6e-05
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 50 6e-05
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 50 6e-05
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 50 6e-05
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 50 6e-05
UniRef50_P90897 Cluster: Putative uncharacterized protein; n=2; ... 50 6e-05
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_Q9GZR7 Cluster: ATP-dependent RNA helicase DDX24; n=33;... 50 6e-05
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 50 6e-05
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 50 6e-05
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 50 8e-05
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 50 8e-05
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 50 8e-05
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 8e-05
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 50 8e-05
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 50 8e-05
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 50 8e-05
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 50 8e-05
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 50 8e-05
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 50 8e-05
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 50 8e-05
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 50 8e-05
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 50 8e-05
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 50 8e-05
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 50 8e-05
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 50 8e-05
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 50 8e-05
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 50 8e-05
UniRef50_UPI0001555247 Cluster: PREDICTED: similar to DEAD (Asp-... 50 1e-04
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 50 1e-04
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 50 1e-04
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 50 1e-04
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 50 1e-04
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 50 1e-04
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 50 1e-04
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 50 1e-04
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 50 1e-04
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 50 1e-04
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 50 1e-04
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 50 1e-04
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 50 1e-04
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 49 1e-04
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 49 1e-04
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 49 1e-04
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 49 1e-04
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 49 1e-04
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 49 1e-04
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 49 1e-04
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 49 1e-04
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 49 1e-04
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 49 1e-04
UniRef50_Q16XX2 Cluster: DEAD box ATP-dependent RNA helicase; n=... 49 1e-04
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 49 1e-04
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 49 1e-04
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 49 1e-04
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 49 1e-04
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 49 1e-04
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 49 2e-04
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 49 2e-04
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 49 2e-04
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 49 2e-04
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 49 2e-04
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 49 2e-04
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 49 2e-04
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 49 2e-04
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 49 2e-04
UniRef50_Q5CR74 Cluster: Dbp7p, eIF4A-a-family RNA SFII helicase... 49 2e-04
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 49 2e-04
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 49 2e-04
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 49 2e-04
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 49 2e-04
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 48 2e-04
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 48 2e-04
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 48 2e-04
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 48 2e-04
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 159 bits (387), Expect = 7e-38
Identities = 102/230 (44%), Positives = 122/230 (53%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPA+VHI NQPRL R DGPI LVLAPTRELAQQIQQVA EFG + HVRNTCIFGGAPKG
Sbjct: 212 VLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKG 271
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWCWMRLIECWTWAXXXXXXXXXXX 375
Q R LERGVEIVIATPGRL+ F R + ++ L E
Sbjct: 272 QQARDLERGVEIVIATPGRLIDFLERGTTSLKRC---TYLVLDEADRMLDMGFEPQIRKI 328
Query: 376 XXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLELWPTTTSSRLLMFVRNG 555
I Q+ EV+ LAEEFL++YIQ NIGSL L +++
Sbjct: 329 MQQIRP--DRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDEN 386
Query: 556 RRMXN*LHCSLXYLQRGEPKTIIFAENQKXGXTXYVKGDXXVAGWRXLGI 705
++ + E KTIIF E +K + + GWR I
Sbjct: 387 EKLMKLIKLLTDISAENETKTIIFVETKK--RVDEITRNISRQGWRACAI 434
Score = 136 bits (330), Expect = 5e-31
Identities = 73/120 (60%), Positives = 84/120 (70%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDFLE+ TT+L+RCTYLVLDEADRMLDMGFEPQIRKI++QIRPDRQVLMWSATW
Sbjct: 292 IDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQ 351
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGGTQ 614
+ + + ANHNILQIVDVC+E EK KLI LLT IS+E T+
Sbjct: 352 LAEEFLNNYIQVNIGSLS-----LSANHNILQIVDVCDENEKLMKLIKLLTDISAENETK 406
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 150 bits (364), Expect = 4e-35
Identities = 98/233 (42%), Positives = 125/233 (53%), Gaps = 3/233 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
I PA+VHI +Q +L R DGPI LVLAPTRELAQQIQQVA +FGQ I+ NTC+FGGAPKG
Sbjct: 177 IAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKG 236
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRR---RQRTCADALIWCWMRLIECWTWAXXXXXXXX 366
PQ R LERG EIVIATPGRL+ F R R C ++ R+++
Sbjct: 237 PQIRDLERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLD----MGFEPQIRK 292
Query: 367 XXXXXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLELWPTTTSSRLLMFV 546
D+ Q+ EV+NLAEEFL+DYIQ NIGSL L +++
Sbjct: 293 IMGQIRPDR----QVLMWSATWPKEVRNLAEEFLNDYIQINIGSLNLSANHNILQIVDVC 348
Query: 547 RNGRRMXN*LHCSLXYLQRGEPKTIIFAENQKXGXTXYVKGDXXVAGWRXLGI 705
+ + + E KTIIF E ++ + + GWR + I
Sbjct: 349 EDYEKDQKLMKLLTEISAENETKTIIFVETKR--RVDDITRNINRNGWRAVSI 399
Score = 139 bits (336), Expect = 1e-31
Identities = 76/120 (63%), Positives = 86/120 (71%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDFLE+ TNLRRCTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQVLMWSATW P
Sbjct: 257 IDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATW--PKEV 314
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGGTQ 614
E ++ S ANHNILQIVDVCE++EK+ KL+ LLT IS+E T+
Sbjct: 315 RNLAEEFLNDYIQINIGSLNLS---ANHNILQIVDVCEDYEKDQKLMKLLTEISAENETK 371
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 143 bits (347), Expect = 5e-33
Identities = 93/230 (40%), Positives = 118/230 (51%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
ILPA++HI NQPRLLR DGPI LVLAPTRELAQQIQQV N+FG+ + + NTCIFGGA K
Sbjct: 156 ILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGASKH 215
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWCWMRLIECWTWAXXXXXXXXXXX 375
PQ L RGVEIVIATPGR LI + T + + +
Sbjct: 216 PQADDLRRGVEIVIATPGR-LIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIIS 274
Query: 376 XXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLELWPTTTSSRLLMFVRNG 555
D+ Q+ E++ LAEEFL +YIQ NIGSL L +++
Sbjct: 275 QIRPDR----QVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAANENIMQIIECCEEY 330
Query: 556 RRMXN*LHCSLXYLQRGEPKTIIFAENQKXGXTXYVKGDXXVAGWRXLGI 705
+ Q+G+ K+IIF E ++ + GWR GI
Sbjct: 331 EKETRLFKLLTELSQQGDSKSIIFVETKR--KVDQITNVIKRNGWRCDGI 378
Score = 129 bits (312), Expect = 8e-29
Identities = 70/121 (57%), Positives = 83/121 (68%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDFLE TTNLRR TYLVLDEADRMLDMGFEPQIRKII QIRPDRQVLMWSATW P
Sbjct: 236 IDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATW--PKEI 293
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGGTQ 614
E R ++ + AN NI+QI++ CEE+EK +L LLT +S +G ++
Sbjct: 294 RKLAEEFLREYIQINIGSLNLA---ANENIMQIIECCEEYEKETRLFKLLTELSQQGDSK 350
Query: 615 N 617
+
Sbjct: 351 S 351
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 136 bits (330), Expect = 5e-31
Identities = 76/116 (65%), Positives = 82/116 (70%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDFLE+ TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW P
Sbjct: 366 IDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW--PKEV 423
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSE 602
E ++ S ANHNI QIVDVCEE EK KL++LL ISS+
Sbjct: 424 QALAEDFLHDYIQINIGSLNLS---ANHNIHQIVDVCEEGEKEGKLLSLLKEISSD 476
Score = 130 bits (315), Expect = 4e-29
Identities = 90/214 (42%), Positives = 111/214 (51%), Gaps = 5/214 (2%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIH--VRNTCIFGGAP 189
+LP IVHI +Q L R +GP+VLVLAPTRELAQQIQ V +FG +R TCIFGGA
Sbjct: 284 MLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGAL 343
Query: 190 KGPQGRCLERGVEIVIATPGRLLIFWRR---RQRTCADALIWCWMRLIECWTWAXXXXXX 360
KGPQ R LERGVE+VIATPGRL+ F R R C ++ R+++
Sbjct: 344 KGPQVRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLD----MGFEPQI 399
Query: 361 XXXXXXXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLELWPTTTSSRLLM 540
D+ Q+ EVQ LAE+FLHDYIQ NIGSL L +++
Sbjct: 400 RKIIEQIRPDR----QVLMWSATWPKEVQALAEDFLHDYIQINIGSLNLSANHNIHQIVD 455
Query: 541 FVRNGRRMXN*LHCSLXYLQRGEPKTIIFAENQK 642
G + L K IIF E +K
Sbjct: 456 VCEEGEKEGKLLSLLKEISSDVNSKIIIFVETKK 489
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 135 bits (326), Expect = 2e-30
Identities = 85/164 (51%), Positives = 96/164 (58%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
ILPAIVHI NQ L R DGPI LVLAPTRELAQQIQQVA EFG S +VRNTC+FGGAPKG
Sbjct: 336 ILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKG 395
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWCWMRLIECWTWAXXXXXXXXXXX 375
Q R L+RG EIVIATPGR LI + T + + +
Sbjct: 396 GQMRDLQRGCEIVIATPGR-LIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVS 454
Query: 376 XXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLEL 507
D+ Q EV+ LAE+FL +YIQ NIGSLEL
Sbjct: 455 QIRPDR----QTLMWSATWPKEVKQLAEDFLGNYIQINIGSLEL 494
Score = 123 bits (296), Expect = 7e-27
Identities = 64/113 (56%), Positives = 74/113 (65%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDFL +TNL+RCTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQ LMWSATW
Sbjct: 416 IDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQ 475
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXI 593
+ + + ANHNI Q+VDVC+E+ K KL TLL+ I
Sbjct: 476 LAEDFLGNYIQINIGSLE-----LSANHNIRQVVDVCDEFSKEEKLKTLLSDI 523
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 124 bits (300), Expect = 2e-27
Identities = 67/116 (57%), Positives = 74/116 (63%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDFL E TNLRRC+YLVLDEADRMLDMGFEPQIR IIEQIRPD Q LMWSATW
Sbjct: 222 IDFLSSEHTNLRRCSYLVLDEADRMLDMGFEPQIRAIIEQIRPDHQTLMWSATWPDAVSR 281
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSE 602
+ + + ANHNILQI+DVC+E EK KL LL I +E
Sbjct: 282 LVKDYLKDYIQINVGSLK-----LAANHNILQIIDVCQEHEKEAKLSILLREIMAE 332
Score = 113 bits (273), Expect = 4e-24
Identities = 79/210 (37%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPA++HI Q RL R DGPI L+LAPTRELAQQI+QV ++FG+++ ++NTC+FGG K
Sbjct: 142 LLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAMKIKNTCLFGGGAKR 201
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWC-WMRLIECWTWAXXXXXXXXXX 372
QG L+ GVEIVIATPGR LI + + T L C ++ L E
Sbjct: 202 QQGDDLKYGVEIVIATPGR-LIDFLSSEHT---NLRRCSYLVLDEADRMLDMGFEPQIRA 257
Query: 373 XXXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLELWPTTTSSRLLMFVRN 552
I Q V L +++L DYIQ N+GSL+L +++ +
Sbjct: 258 IIEQIRPD--HQTLMWSATWPDAVSRLVKDYLKDYIQINVGSLKLAANHNILQIIDVCQE 315
Query: 553 GRRMXN*LHCSLXYLQRGEPKTIIFAENQK 642
+ + E KTIIF E +K
Sbjct: 316 HEKEAKLSILLREIMAEKECKTIIFIETKK 345
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 121 bits (292), Expect = 2e-26
Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP+IVHI QP L DGPIVLVLAPTRELA QIQ+ +FG+S +RNTC++GG PKGP
Sbjct: 190 LPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGP 249
Query: 199 QGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWCWMRLIECWTWAXXXXXXXXXXXX 378
Q R L RGVE+ IATPGR LI +T + + + +
Sbjct: 250 QIRDLSRGVEVCIATPGR-LIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQ 308
Query: 379 XXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLELWPTTTSSRLLMFVRNGR 558
D+ Q EV+ LA +FL D+IQ NIGS+EL ++++ V
Sbjct: 309 IRPDR----QTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEME 364
Query: 559 RMXN*LHCSLXYLQRGEPKTIIFAENQKXG--XTXYVKGDXXVAGWRXLGI 705
+ + ++ E K +IF ++ T +++ D GW L I
Sbjct: 365 KRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQD----GWPALSI 411
Score = 107 bits (257), Expect = 4e-22
Identities = 60/107 (56%), Positives = 66/107 (61%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
ID LE TNLRR TYLVLDEADRMLDMGFEPQIRKII QIRPDRQ LMWSATW
Sbjct: 269 IDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRA 328
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLI 575
S + + + ANH I QIV+V E EK ++I
Sbjct: 329 LASDFLQDFIQVNIGSME-----LAANHRITQIVEVVTEMEKRDRMI 370
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 119 bits (286), Expect = 1e-25
Identities = 57/81 (70%), Positives = 66/81 (81%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPAIVH+ QP L DGPIVLVLAPTRELA QIQQ A +FG S ++NTCI+GG PKG
Sbjct: 151 LLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKG 210
Query: 196 PQGRCLERGVEIVIATPGRLL 258
PQ R L++GVEIVIATPGRL+
Sbjct: 211 PQVRDLQKGVEIVIATPGRLI 231
Score = 79.0 bits (186), Expect = 2e-13
Identities = 40/54 (74%), Positives = 41/54 (75%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
ID LE TNLRR T +VLDEADRMLDMGFEPQIRK I PDRQ L WSATW
Sbjct: 231 IDMLESNHTNLRRVT-IVLDEADRMLDMGFEPQIRKCISD-TPDRQTLYWSATW 282
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 116 bits (279), Expect = 8e-25
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP +VH+ QPRL + DGPIVL+LAPTRELA QIQQ + +FG R+TCI+GGAPKG
Sbjct: 306 LLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKG 365
Query: 196 PQGRCLERGVEIVIATPGRLL 258
PQ R L RGVEIVIATPGRL+
Sbjct: 366 PQIRDLRRGVEIVIATPGRLI 386
Score = 101 bits (243), Expect = 2e-20
Identities = 60/113 (53%), Positives = 69/113 (61%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
ID LE TNLRR TYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQ L WSATW P
Sbjct: 386 IDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATW--PREV 443
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXI 593
+ P + ANH+I QI++V E EK +L LL+ +
Sbjct: 444 ESLARQFLQNP---YKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDL 493
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 107 bits (256), Expect = 5e-22
Identities = 61/130 (46%), Positives = 75/130 (57%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
ID LE+ TNL R TYLVLDEADRMLDMGFEPQIRK++ QIRPDRQ L+WSATW
Sbjct: 123 IDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQK 182
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGGTQ 614
+ + +P +H A+HNI Q V+V EE EK +L L + E +
Sbjct: 183 L-ARDLCKEIP--IHINVGSVDALKASHNIKQYVNVVEESEKKARLKMFLGQVMVESAPK 239
Query: 615 NYYIC*KPKG 644
C +G
Sbjct: 240 VLIFCETKRG 249
Score = 100 bits (239), Expect = 6e-20
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPA++HI QP L DGPI LVLAPTREL +QI++ AN+FG +RNT I+GG PK
Sbjct: 43 LLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQFGSIFKLRNTAIYGGVPKR 102
Query: 196 PQGRCLERGVEIVIATPGRLL 258
PQ + GVEI IA PGRL+
Sbjct: 103 PQQASIRNGVEICIACPGRLI 123
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 106 bits (255), Expect = 7e-22
Identities = 54/116 (46%), Positives = 73/116 (62%)
Frame = +3
Query: 69 WSNSPCVGSNKRVSPTNTAGCQ*IWSKHPRAEHLYLWWCSKGTTGQMS*EGSGNCYCYSW 248
W++ G ++ + P +AG + +HL + C++GT+ S E G+ + ++
Sbjct: 189 WTHMFGFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTSNPGSGERCGDLHRHAR 248
Query: 249 *TIDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+ LRRCTYLVLDEADRMLDMGFEPQIRKI++QIRPDRQ LMWSATW
Sbjct: 249 ASHRLPGGREDQLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 304
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 102 bits (244), Expect = 1e-20
Identities = 63/117 (53%), Positives = 69/117 (58%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDFLE TNLRR TYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQ LM+SATW P
Sbjct: 345 IDFLESSVTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATW---PKE 401
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEG 605
+ S +H HNI Q V + EE EK KL LL + G
Sbjct: 402 VIALSRSLLSHEVVHVNIGSLD-LTTCHNIEQNVFILEEREKRVKLKELLKKLMDGG 457
Score = 92.3 bits (219), Expect = 2e-17
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPAIVHI Q L DGPIVLVLAPTRELA+QI++ A FG+S ++ + +GG PK
Sbjct: 265 LLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKR 324
Query: 196 PQGRCLERGVEIVIATPGRLLIF 264
Q L RGVEI+IA PGRL+ F
Sbjct: 325 FQTIALRRGVEILIACPGRLIDF 347
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 99.5 bits (237), Expect = 1e-19
Identities = 58/113 (51%), Positives = 67/113 (59%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
ID +E TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQ L WSATW P
Sbjct: 202 IDMIESHHTNLRRITYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATW--PKEV 259
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXI 593
+ P + ANH I Q V++ E +K KL+ LL I
Sbjct: 260 EQLARNFLFDPYKVIIGSEELK---ANHAISQHVEILSESQKYNKLVNLLEDI 309
Score = 63.3 bits (147), Expect = 8e-09
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSI 153
+LPAIVH+ QP L DGPIVLVLAPTRELA QIQQ A +FG I
Sbjct: 148 LLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGVEI 193
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 99.5 bits (237), Expect = 1e-19
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
ILPA VHI+ QP L DGPIVLVLAPTRELA+QI+Q +F +RNTC +GG PK
Sbjct: 168 ILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKS 227
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L++GV I+IA PGRL+
Sbjct: 228 GQIYALKQGVHILIACPGRLI 248
Score = 95.9 bits (228), Expect = 1e-18
Identities = 43/54 (79%), Positives = 47/54 (87%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
ID LE+ TNL R TYLVLDEAD+MLDMGFE QIRKI++QIRPDRQ LMWSATW
Sbjct: 248 IDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATW 301
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 99.5 bits (237), Expect = 1e-19
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP+IVHI QP + + DGPIVLVLAPTRELA QI++ + FG+S ++ CI+GGA K
Sbjct: 156 LLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKY 215
Query: 196 PQGRCLERGVEIVIATPGRLLIF 264
Q L++GV++VIATPGRL+ F
Sbjct: 216 SQRALLQQGVDVVIATPGRLIDF 238
Score = 97.9 bits (233), Expect = 3e-19
Identities = 59/117 (50%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDFLE ETT LRR TYLVLDEADRMLDMGFE QIRKI+ QIRPDRQ LM+SATW P
Sbjct: 236 IDFLESETTTLRRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATW--PKNV 293
Query: 435 XG-SXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSE 602
+ + P + +H + N I QIV V ++ +K +LI L ++ +
Sbjct: 294 QNLAQDYCKNTPVYVQIGKHELA---INERIKQIVYVTDQSKKINQLIKQLDCLTQK 347
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 98.3 bits (234), Expect = 2e-19
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW--AXPP 428
IDF+++ T+L RCT+L+LDEADRML+MGFE Q++ II QIRPDRQ +MW+ATW A
Sbjct: 288 IDFIKRGVTSLSRCTFLILDEADRMLEMGFEVQVQDIIGQIRPDRQTVMWTATWPQAIQQ 347
Query: 429 GXXGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGG 608
G ++ +P H AN ++ QI++VC+E +++ K+ ++ I SE
Sbjct: 348 FALGFMFHPLQINI-GNPDLH------ANESVKQIIEVCQERDRDSKMNEIVKRIGSE-- 398
Query: 609 TQNYYIC*KPKGXADXIC 662
+ I K K AD +C
Sbjct: 399 -KKVLIFVKTKRSADNLC 415
Score = 76.2 bits (179), Expect = 1e-12
Identities = 36/86 (41%), Positives = 54/86 (62%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
++PAI+HI++ P +GP VL+LAPTREL QI A +F + ++ FGG P+
Sbjct: 208 LIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIKFTKGTAIKTVRCFGGVPQS 267
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRR 273
Q + + G +I +ATPGRL+ F +R
Sbjct: 268 SQMKDFQSGCDICVATPGRLIDFIKR 293
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 98.3 bits (234), Expect = 2e-19
Identities = 71/209 (33%), Positives = 101/209 (48%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
++PA+VHI Q + R DGPIVLVL+PTRELAQQI +VA F ++ +R TC+FGGA +G
Sbjct: 180 LIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRG 239
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWCWMRLIECWTWAXXXXXXXXXXX 375
PQ L +V+ATPGRL+ F Q C + ++ L E
Sbjct: 240 PQANDLRHLPSLVVATPGRLIDFIEGGQ--CPMNRV-NFLVLDEADQMLDMGFEPQIRKI 296
Query: 376 XXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLELWPTTTSSRLLMFVRNG 555
I K Q E+Q LA +FL D + IG+ +L TT+S + +
Sbjct: 297 IGHISK--DRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDL---TTNSNIKQVITKC 351
Query: 556 RRMXN*LHCSLXYLQRGEPKTIIFAENQK 642
C + + K IIF + ++
Sbjct: 352 EEFEKLSKCLEVLNEHKDDKIIIFTKTKR 380
Score = 78.6 bits (185), Expect = 2e-13
Identities = 49/110 (44%), Positives = 62/110 (56%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDF+E + R +LVLDEAD+MLDMGFEPQIRKII I DRQ +M+SATW P
Sbjct: 260 IDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRKIIGHISKDRQTMMFSATW---PKE 316
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
+ V +H N NI Q++ CEE+EK K + +L
Sbjct: 317 IQQLAADFLVDP-VHMI-IGNKDLTTNSNIKQVITKCEEFEKLSKCLEVL 364
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 97.5 bits (232), Expect = 4e-19
Identities = 47/81 (58%), Positives = 59/81 (72%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
ILPA+VH +Q L R DGPIVLVLAPTREL QI++V +EF ++R+T ++GGA
Sbjct: 142 ILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQ 201
Query: 196 PQGRCLERGVEIVIATPGRLL 258
PQ R L G E+VIATPGRL+
Sbjct: 202 PQIRALHEGAEVVIATPGRLI 222
Score = 82.6 bits (195), Expect = 1e-14
Identities = 52/110 (47%), Positives = 61/110 (55%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
ID ++ L R T+LVLDEADRMLDMGFEPQ+RKII + +RQ LMWSATW P
Sbjct: 222 IDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQTLMWSATW--PREV 279
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
G ES + N I QIV+VC EK KLI +L
Sbjct: 280 RGLAESYMNEYIQVVVGNEELK---TNSKIKQIVEVCSGREKEDKLIGVL 326
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 94.3 bits (224), Expect = 4e-18
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Frame = +1
Query: 16 ILPAIVHII---NQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
+LP +HI N PR GP VLVLAPTRELA QI + A +FG+S + +TC++GGA
Sbjct: 205 LLPGFMHIKRLQNNPR----SGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGA 260
Query: 187 PKGPQGRCLERGVEIVIATPGRL 255
PKGPQ R L+RGV++V+ATPGRL
Sbjct: 261 PKGPQLRDLDRGVDVVVATPGRL 283
Score = 79.4 bits (187), Expect = 1e-13
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
D LE +L++ +YLVLDEADRMLDMGFEPQIRKI+++I P RQ LM++ATW
Sbjct: 285 DILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATW 337
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 93.5 bits (222), Expect = 7e-18
Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQ-QVANEFGQSIHVRNTCIFGGAPK 192
++PA +HI+ QP L DGPI LVLAPTRELA QI+ + + + TC++GG PK
Sbjct: 200 MIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKALTRVPSIMTTCVYGGTPK 259
Query: 193 GPQGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWCWMRLIECWTWAXXXXXXXXXX 372
GPQ R L GV + IATPGRL+ + C + L ++ L E
Sbjct: 260 GPQQRALRAGVHVCIATPGRLIDL---LETNCTNLLRVTYLTLDEADRMLDMGFEDQIRK 316
Query: 373 XXXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLEL 507
I Q E++NLA F D+++ +IGS EL
Sbjct: 317 ICSQIRT--DRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEEL 359
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/54 (75%), Positives = 42/54 (77%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
ID LE TNL R TYL LDEADRMLDMGFE QIRKI QIR DRQ LM+SATW
Sbjct: 281 IDLLETNCTNLLRVTYLTLDEADRMLDMGFEDQIRKICSQIRTDRQTLMFSATW 334
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 93.1 bits (221), Expect = 9e-18
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +1
Query: 67 DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATP 246
DGP VLVL+PTRELA QIQ A +FG+S + + C++GGAPKGPQ R LERG +IV+ATP
Sbjct: 302 DGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATP 361
Query: 247 GRL 255
GRL
Sbjct: 362 GRL 364
Score = 86.2 bits (204), Expect = 1e-15
Identities = 53/124 (42%), Positives = 70/124 (56%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXX 437
D LE +L + +YLVLDEADRMLDMGFEPQIRKI++Q++P RQ LM++ATW
Sbjct: 366 DILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKI 425
Query: 438 GSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGGTQN 617
S S V + +AN +I Q VDV EK+ +L +L S E G++
Sbjct: 426 ASDLLSNPVQVNIGNTDQ----LVANKSITQYVDVITPPEKSRRLDQILR--SQEPGSKI 479
Query: 618 YYIC 629
C
Sbjct: 480 IIFC 483
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 92.7 bits (220), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +1
Query: 22 PAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQ 201
PA+VHI++QP L DGPIVL+ APTREL QQI A FG++ ++ +FGG K Q
Sbjct: 163 PALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQ 222
Query: 202 GRCLERGVEIVIATPGRLL 258
+ L+ G EIV+ATPGRL+
Sbjct: 223 SKALQEGAEIVVATPGRLI 241
Score = 78.2 bits (184), Expect = 3e-13
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
ID ++ + TNL R TYLV DEADRM DMGFEPQ+R I +RPDRQ L++SAT+
Sbjct: 241 IDHVKAKATNLHRVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQTLLFSATF 294
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 92.3 bits (219), Expect = 2e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
IDFLE +L+R TYLVLDEADRMLDMGFEP IRKI+ QIRPDRQ LM+SATW
Sbjct: 348 IDFLESNVIDLKRVTYLVLDEADRMLDMGFEPSIRKIVGQIRPDRQTLMFSATW 401
Score = 89.8 bits (213), Expect = 8e-17
Identities = 44/83 (53%), Positives = 57/83 (68%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPA+VHI Q + +GPI LVLAPTRELA QIQ+ +FG + + C++GGAPK
Sbjct: 268 MLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGSKCKISSVCVYGGAPKI 327
Query: 196 PQGRCLERGVEIVIATPGRLLIF 264
Q + L G +IVIATPGRL+ F
Sbjct: 328 YQEKELRNGCDIVIATPGRLIDF 350
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 90.2 bits (214), Expect = 6e-17
Identities = 44/80 (55%), Positives = 58/80 (72%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
++PA + ++ R +GP VL+LAPTRELA QIQ A FG+S + TC++GGAPKG
Sbjct: 490 LIPAFI-LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKG 548
Query: 196 PQGRCLERGVEIVIATPGRL 255
PQ + LERG +IV+ATPGRL
Sbjct: 549 PQLKELERGADIVVATPGRL 568
Score = 75.4 bits (177), Expect = 2e-12
Identities = 49/124 (39%), Positives = 65/124 (52%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXX 437
D LE + + ++ + LVLDEADRMLDMGFEPQIRKI+ +I P RQ LM++ATW
Sbjct: 570 DILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKI 629
Query: 438 GSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGGTQN 617
S V + AN I Q V+V + EK +L +L S E G++
Sbjct: 630 ASDLLVNPVQVNIGRVDE----LAANKAITQYVEVVPQMEKERRLEQILR--SQERGSKV 683
Query: 618 YYIC 629
C
Sbjct: 684 IIFC 687
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 89.8 bits (213), Expect = 8e-17
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
IDFL+ + NL R TYLVLDEADRMLDMGFEPQ+RKI QIRPDRQ +M+SATW
Sbjct: 236 IDFLDIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQIRPDRQTVMFSATW 289
Score = 86.6 bits (205), Expect = 8e-16
Identities = 44/83 (53%), Positives = 57/83 (68%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
++PA+ HI Q L DGP+V+VLAPTRELAQQI++ + V C++GGAPKG
Sbjct: 157 MVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEETKKVIPG-DVYCGCVYGGAPKG 215
Query: 196 PQGRCLERGVEIVIATPGRLLIF 264
PQ L RGV I++ATPGRL+ F
Sbjct: 216 PQLGLLRRGVHILVATPGRLIDF 238
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 86.6 bits (205), Expect = 8e-16
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDD--GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 189
++P +H+ R+ D GP +LVL+PTRELA QIQ A +FG+S + C++GGAP
Sbjct: 216 LIPGFMHL---QRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAP 272
Query: 190 KGPQGRCLERGVEIVIATPGRL 255
KGPQ + +ERGV+IV+ATPGRL
Sbjct: 273 KGPQLKEIERGVDIVVATPGRL 294
Score = 77.0 bits (181), Expect = 6e-13
Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXX 437
D LE + +L + +YLVLDEADRMLDMGFEPQIRKI+ ++ RQ LM++ATW P
Sbjct: 296 DILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATW---PKEV 352
Query: 438 GSXESS*RV-PA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGGTQ 614
+ V PA ++ +AN +I Q ++V EK+ +L +L S E G++
Sbjct: 353 RKIAADLLVNPAQVNIGN--VDELVANKSITQTIEVLAPMEKHSRLEQILR--SQEPGSK 408
Query: 615 NYYIC 629
C
Sbjct: 409 IIIFC 413
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 86.6 bits (205), Expect = 8e-16
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP IVHI++QP L RD+GPI ++ APTRELA QI A +F ++ +R + ++GG K
Sbjct: 283 VLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKH 342
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q + L+ G EIV+ATPGRL+
Sbjct: 343 EQFKELKAGCEIVVATPGRLI 363
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/53 (62%), Positives = 42/53 (79%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID L+ + + R +YLVLDEADRM D+GFEPQ+R I+ QIRPDRQ L++SAT
Sbjct: 363 IDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSAT 415
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 86.2 bits (204), Expect = 1e-15
Identities = 41/81 (50%), Positives = 57/81 (70%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPAI H ++QP L +DG IVLV+APTREL QI +++F +++ ++ I+GGA G
Sbjct: 423 LLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIG 482
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EIVI TPGRL+
Sbjct: 483 EQLNALKRGAEIVIGTPGRLI 503
Score = 70.5 bits (165), Expect = 5e-11
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+ TNLRR T+LVLDEADRM DMGF PQI I+ IRPDRQ ++SAT+
Sbjct: 512 KVTNLRRVTFLVLDEADRMFDMGFAPQISAIVGNIRPDRQTALFSATF 559
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 85.8 bits (203), Expect = 1e-15
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
++FL T L R +Y V+DEADRMLDMGFEPQIRKI+ QIRPDRQ LM+SATW
Sbjct: 453 LEFLSNGTIKLNRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATW 506
Score = 77.0 bits (181), Expect = 6e-13
Identities = 38/83 (45%), Positives = 57/83 (68%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP ++H++ QP + GPI+L+L+PTREL QI + A + + +++R I+GGA K
Sbjct: 374 LLPGLLHLLAQPPV-GTGGPIMLILSPTRELCLQIAEEARPYSRLLNLRLVPIYGGASKF 432
Query: 196 PQGRCLERGVEIVIATPGRLLIF 264
Q R L+ G EI++ATPGRLL F
Sbjct: 433 AQVRELQNGAEIMVATPGRLLEF 455
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/81 (48%), Positives = 58/81 (71%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPAI H++ QP+L ++G IVL++APTRELA QI +++ + + +R ++GG+P G
Sbjct: 443 LLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIG 502
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RGVEIV TPGRL+
Sbjct: 503 EQLNALKRGVEIVCGTPGRLI 523
Score = 69.7 bits (163), Expect = 9e-11
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPP 428
+ TNLRR T++V+DEADRM D+GF PQI I++ IRPDRQ ++SAT+ PP
Sbjct: 532 KVTNLRRVTFVVIDEADRMFDLGFSPQISAIVDNIRPDRQTALFSATF--PP 581
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 84.2 bits (199), Expect = 4e-15
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
ID L++ T L++ ++LVLDEADRMLDMGFEPQIRKI++QIRP RQ +++SATW
Sbjct: 266 IDLLDQGCTTLKQVSFLVLDEADRMLDMGFEPQIRKIVDQIRPQRQTMLFSATW 319
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPAIVHI+ Q R P L+LAPTREL QI +F + C++GG +
Sbjct: 189 LLPAIVHILAQAR---SHDPKCLILAPTRELTLQIYDQFQKFSVGSQLYAACLYGGQDRY 245
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L +G +I+IA PGRL+
Sbjct: 246 IQKSQLRKGPQILIACPGRLI 266
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 83.8 bits (198), Expect = 5e-15
Identities = 46/110 (41%), Positives = 65/110 (59%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXX 437
D + ++ TYLVLDEADRMLDMGFEPQIRK++ IRPDRQ +M SATW PPG
Sbjct: 460 DLVAANVIDITSITYLVLDEADRMLDMGFEPQIRKLLLDIRPDRQTIMTSATW--PPGVR 517
Query: 438 GSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLT 587
+S P ++ + A H + Q ++V +E +K +++ +T
Sbjct: 518 RLAQSYMSNPVQVYVGTLDLA---ATHTVTQQIEVIDEEDKYMRVMNFVT 564
Score = 67.7 bits (158), Expect = 4e-10
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 ILPAIVHIINQP--RLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 189
+LPA +HI QP R GP VLV+APTRELA QI++ ++ Q ++ C++GG
Sbjct: 378 LLPAFIHIEGQPVPRGEARGGPNVLVMAPTRELALQIEKEVFKY-QFRDIKAICLYGGGD 436
Query: 190 KGPQGRCLERGVEIVIATPGRL 255
+ Q ++ GVEI+IATPGRL
Sbjct: 437 RRTQINKVKGGVEIIIATPGRL 458
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 83.4 bits (197), Expect = 7e-15
Identities = 34/81 (41%), Positives = 58/81 (71%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+ P I H+++QP L +DGPI ++L PTREL++Q++ A + Q++++R ++GG+ G
Sbjct: 724 LFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSEARPYCQAVNLRILAVYGGSNIG 783
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RGVEI++ TPGR++
Sbjct: 784 TQLNTLKRGVEILVGTPGRII 804
Score = 62.1 bits (144), Expect = 2e-08
Identities = 42/111 (37%), Positives = 59/111 (53%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXXGSXES 452
+ TNL R +++VLDEADR+LD+GFE QI I+ R D+Q M SAT+ P +
Sbjct: 813 KVTNLNRVSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATF--PNYIQNLAKK 870
Query: 453 S*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEG 605
P + + N+NI Q V+V E +K +L+ LL SS G
Sbjct: 871 LLYKPIEIIVGEK----GKTNNNIYQFVEVLEGGKKIYRLLKLLGEWSSYG 917
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDD----GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGG 183
+LP +V I + P++ R + GP +++APTRELAQQI++ N+FG+ + ++ + GG
Sbjct: 356 LLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGG 415
Query: 184 APKGPQGRCLERGVEIVIATPGRLL 258
A + QG L GVE+VIATPGRLL
Sbjct: 416 ASREDQGMKLRMGVEVVIATPGRLL 440
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 386
+D LE L +CTY++LDEADRMLDMGFEP ++K++E + PD
Sbjct: 440 LDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM-PD 482
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/81 (45%), Positives = 53/81 (65%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP HI++QP L DGPI ++LAPTRELA Q + AN+F + + ++ C +GG
Sbjct: 359 LLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGIS 418
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EIV+ TPGR++
Sbjct: 419 EQIADLKRGAEIVVCTPGRMI 439
Score = 74.5 bits (175), Expect = 3e-12
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+ TNLRR TYLVLDEADRM D GFEPQI K++ IRPD+Q +++SAT+
Sbjct: 448 KVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATF 495
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 81.4 bits (192), Expect = 3e-14
Identities = 39/83 (46%), Positives = 57/83 (68%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP +VHI +Q + GP++L+L PTRELA QIQ+ + F ++ ++ + CI+GGA K
Sbjct: 126 LLPGLVHIESQRK---KGGPMMLILVPTRELAMQIQEHISYFSEAYNMNSACIYGGADKR 182
Query: 196 PQGRCLERGVEIVIATPGRLLIF 264
PQ L R +IV+ATPGRL+ F
Sbjct: 183 PQEMALARDPDIVVATPGRLIDF 205
Score = 81.0 bits (191), Expect = 4e-14
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
IDFL+ + TNL TYLVLDEADRMLDMGFE Q+RKI IR DRQ + +SATW
Sbjct: 203 IDFLDAQVTNLHNVTYLVLDEADRMLDMGFEQQVRKIDSYIREDRQTVFFSATW 256
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 81.4 bits (192), Expect = 3e-14
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
I P ++HI++Q L DGPI +++ PTREL QQI FG++ ++R+ ++GG
Sbjct: 308 IWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMW 367
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q + L+ G EIV+ TPGRL+
Sbjct: 368 EQAKALQEGAEIVVCTPGRLI 388
Score = 77.0 bits (181), Expect = 6e-13
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = +3
Query: 216 EGSGNCYCYSW*TIDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQV 395
EG+ C ID ++K+ TNL+R +YLV DEADRM DMGFE Q+R I +RPDRQ
Sbjct: 375 EGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQT 434
Query: 396 LMWSATW 416
L++SAT+
Sbjct: 435 LLFSATF 441
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 81.0 bits (191), Expect = 4e-14
Identities = 41/83 (49%), Positives = 55/83 (66%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
ILPAI HI+ QPR GP VLV+APTRELA QI Q A ++ + +++ I+GGAP+
Sbjct: 194 ILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRR 253
Query: 196 PQGRCLERGVEIVIATPGRLLIF 264
Q L R +IV+ TPGR++ F
Sbjct: 254 SQQLQLSRRPKIVVGTPGRIIDF 276
Score = 74.1 bits (174), Expect = 4e-12
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
IDF+E +L+ ++LV+DEADR+++MGFE QI I IRPDRQVL WSATW
Sbjct: 274 IDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSIRPDRQVLYWSATW 327
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 80.6 bits (190), Expect = 5e-14
Identities = 33/53 (62%), Positives = 46/53 (86%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
++ ++K+ TNLRRCTY+V+DEAD+M MGFE QIR I++QIRPDRQ L+++AT
Sbjct: 197 MEMIQKKATNLRRCTYVVIDEADKMFSMGFEKQIRSIMQQIRPDRQTLLFTAT 249
Score = 75.4 bits (177), Expect = 2e-12
Identities = 34/79 (43%), Positives = 53/79 (67%)
Frame = +1
Query: 22 PAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQ 201
P ++HI++Q L +++GPI L+LAPTREL QQ+ + + + ++ + GG K Q
Sbjct: 119 PLLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQ 178
Query: 202 GRCLERGVEIVIATPGRLL 258
+ L+ GVEI+IATPGRL+
Sbjct: 179 WKMLKAGVEILIATPGRLM 197
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 80.6 bits (190), Expect = 5e-14
Identities = 35/59 (59%), Positives = 48/59 (81%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
+LPA++ I Q RL R DGPI L+LAPTRELAQQI+QV ++FG++I ++N C+FGG+ K
Sbjct: 53 LLPALMPIDEQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAIKIKNICLFGGSAK 111
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 80.2 bits (189), Expect = 7e-14
Identities = 42/101 (41%), Positives = 62/101 (61%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXX 437
D +++ ++ TYL+LDEADRMLDMGFEPQIRK++ +RPDRQ +M SATW P G
Sbjct: 242 DLVQEGVVDVSTITYLILDEADRMLDMGFEPQIRKVLLDVRPDRQTVMTSATW--PDGVR 299
Query: 438 GSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEK 560
+S P ++ + A H + Q+++V +E +K
Sbjct: 300 RLAQSYMHDPIQVYIGTLDLA---ATHTVTQVIEVMDEEDK 337
Score = 71.3 bits (167), Expect = 3e-11
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 2/176 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDD--GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 189
+LPA++HI QP + R + GP VLVLAPTRELA QI++ ++ Q ++ C++GG
Sbjct: 161 LLPALIHIEGQP-IPRGERGGPNVLVLAPTRELALQIEKEVAKY-QFRGIKAVCLYGGGD 218
Query: 190 KGPQGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWCWMRLIECWTWAXXXXXXXXX 369
+ Q + GVEI+IATPGRL Q D ++ L E
Sbjct: 219 RRAQINVVRNGVEILIATPGRLNDL---VQEGVVDVSTITYLILDE--ADRMLDMGFEPQ 273
Query: 370 XXXXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLELWPTTTSSRLL 537
+D Q V+ LA+ ++HD IQ IG+L+L T T ++++
Sbjct: 274 IRKVLLDVRPDRQTVMTSATWPDGVRRLAQSYMHDPIQVYIGTLDLAATHTVTQVI 329
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 79.4 bits (187), Expect = 1e-13
Identities = 51/134 (38%), Positives = 71/134 (52%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXX 437
D + ++ TYLVLDEADRMLDMGFEPQIRK++ IRPDRQ +M SATW PPG
Sbjct: 419 DLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATW--PPGVR 476
Query: 438 GSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGGTQN 617
+S + P + + A H++ QI+ + E + K T+ + + + T
Sbjct: 477 RLAQSYMKNPIQVCVGSLDLA---ATHSVKQIIKLME--DDMDKFNTITSFVKNMSSTDK 531
Query: 618 YYIC*KPKGXADXI 659
I K AD +
Sbjct: 532 IIIFCGRKVRADDL 545
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 ILPAIVHIINQ--PRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 189
+LP ++H Q PR R G VLVLAPTRELA QI+ ++ ++ C++GG
Sbjct: 338 LLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIEMEVKKYSFR-GMKAVCVYGGGN 395
Query: 190 KGPQGRCLERGVEIVIATPGRL 255
+ Q LERG EI+I TPGRL
Sbjct: 396 RNMQISDLERGAEIIICTPGRL 417
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 79.0 bits (186), Expect = 2e-13
Identities = 35/81 (43%), Positives = 54/81 (66%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + HI +QP L R DGPI L++ PTRELA QI + N F + +++ + C FGG+
Sbjct: 372 VLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIE 431
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L++G +I++ TPGR++
Sbjct: 432 SQIAELKKGAQIIVGTPGRII 452
Score = 74.1 bits (174), Expect = 4e-12
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
TNL+R TYLVLDEADRM DMGFEPQ+ K+ ++RPDRQ +++SAT+
Sbjct: 463 TNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSATF 508
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/80 (43%), Positives = 53/80 (66%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
+P I H++ Q L + +GPI +V AP RELA+QI N+FG+ +++R+ +FGG
Sbjct: 196 IPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEINKFGKYLNIRSVAVFGGTGISN 255
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q L+RG EIV+ TPGR++
Sbjct: 256 QIGALKRGTEIVVCTPGRMI 275
Score = 77.0 bits (181), Expect = 6e-13
Identities = 46/110 (41%), Positives = 69/110 (62%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXXGSXESS* 458
TNLRR T++VLDEADRM DMGF PQI++IIE IRPD+Q++M+SAT+ P
Sbjct: 286 TNLRRVTFVVLDEADRMFDMGFGPQIKRIIEGIRPDKQIVMFSATF--PISVEQHAREFL 343
Query: 459 RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEGG 608
+ P + + ++ I QIV+V E +K +LI+++ +++GG
Sbjct: 344 KKPIEIICGGR----SQVSNTIEQIVEVIETKKKIERLISIVLEQNNKGG 389
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/83 (46%), Positives = 55/83 (66%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
++PA++HI Q ++ +DGPIVLVL+PTRELA Q +VA +F + ++ CI+GG +
Sbjct: 140 LIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKHVCIYGGEDRH 199
Query: 196 PQGRCLERGVEIVIATPGRLLIF 264
Q L EIV ATPGRL+ F
Sbjct: 200 RQINKLRFHPEIVTATPGRLIDF 222
Score = 74.9 bits (176), Expect = 2e-12
Identities = 47/110 (42%), Positives = 58/110 (52%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
IDFL+ N R +LVLDEADRMLDMGFEPQIR II + DR+ M+SATW
Sbjct: 220 IDFLQSGVFNPNRANFLVLDEADRMLDMGFEPQIRAIIASLTKDRETFMFSATWPKEIRQ 279
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
S S P +H + N I Q V + +E EK K + +L
Sbjct: 280 LASDFLS--NPIHMHVGGEELA---TNERIQQNVLLLQEHEKGEKCVEIL 324
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 77.8 bits (183), Expect = 3e-13
Identities = 33/53 (62%), Positives = 46/53 (86%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
I+ ++K+ TNL+RCTY+VLDEAD+M +GFE QIR II QIRPD+Q+L+++AT
Sbjct: 323 IEMVKKKATNLQRCTYIVLDEADQMFSLGFEYQIRSIIGQIRPDKQILLFTAT 375
Score = 68.1 bits (159), Expect = 3e-10
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+ P +VH+ Q + + +GPI LV+ PTREL QQ+ ++ Q + + + GG K
Sbjct: 243 VWPMLVHVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKYAQLFQISVSALLGGENKH 302
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q + L GV+I+IATPGRL+
Sbjct: 303 HQWKELRAGVDIIIATPGRLI 323
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 77.8 bits (183), Expect = 3e-13
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
TNL RCTYLVLDEADRM D+GFEPQ+ +II IRPDRQ +++SAT+
Sbjct: 564 TNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATF 609
Score = 72.9 bits (171), Expect = 1e-11
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP HI +Q L +GPI +++ PTRELA QI + F + +++R C +GGAP
Sbjct: 473 LLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIK 532
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EIV+ TPGR++
Sbjct: 533 DQIADLKRGAEIVVCTPGRMI 553
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 77.4 bits (182), Expect = 5e-13
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQS-IHVRNTCIFGGAPK 192
+LPA I Q L + +GP+ LVLAPTRELA QI AN F ++ + R IFGGA K
Sbjct: 158 LLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEANAFNRAGVPARCCAIFGGASK 217
Query: 193 GPQGRCLERGVEIVIATPGRLL 258
Q + L G EIV+ATPGRL+
Sbjct: 218 HEQLKRLRAGAEIVVATPGRLI 239
Score = 41.5 bits (93), Expect = 0.028
Identities = 21/30 (70%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +3
Query: 255 IDFLE-KETTNLRRCTYLVLDEADRMLDMG 341
ID L K + +LRR TYL LDEADRMLDMG
Sbjct: 239 IDVLHVKNSIDLRRVTYLALDEADRMLDMG 268
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 77.4 bits (182), Expect = 5e-13
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
TNLRR TY+VLDEADRM DMGFEPQ+ +II+ +RPDRQ +M+SAT+
Sbjct: 656 TNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATF 701
Score = 76.6 bits (180), Expect = 8e-13
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
ILP HI++QP + DG I +++APTREL QI + +F +S+ +R C++GG
Sbjct: 565 ILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGIS 624
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EI++ TPGR++
Sbjct: 625 EQIAELKRGAEIIVCTPGRMI 645
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 77.4 bits (182), Expect = 5e-13
Identities = 44/102 (43%), Positives = 62/102 (60%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXXGSXESS* 458
TNLRR TYLV+DEADRM DMGFEPQI +I++ IRPDRQ +++SAT+ P
Sbjct: 542 TNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATF--PRQVETLARKVL 599
Query: 459 RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
P + ++ N +I Q+V++ E E+ +L+ LL
Sbjct: 600 NKPVEIQVGGR----SVVNKDITQLVEIRPESERFSRLLELL 637
Score = 72.1 bits (169), Expect = 2e-11
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + HI +QP + DGPI LV+APTREL QQI +F +++ + ++GG+
Sbjct: 451 VLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVA 510
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EIV+ TPGR++
Sbjct: 511 QQISELKRGTEIVVCTPGRMI 531
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 77.0 bits (181), Expect = 6e-13
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
TNLRR TY+V+DEADRM D+GFEPQI KII+ IRPDRQ++M+SAT+
Sbjct: 650 TNLRRVTYVVIDEADRMFDLGFEPQICKIIQNIRPDRQLVMFSATF 695
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + H+++QP L DGPI +++APTRELA QI F +++ C GGA
Sbjct: 559 LLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIYVNCRWFTSILNLNVVCCVGGAGIA 618
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EIV+ TPGR++
Sbjct: 619 GQLSDLKRGTEIVVCTPGRMI 639
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 77.0 bits (181), Expect = 6e-13
Identities = 59/165 (35%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Frame = +1
Query: 16 ILPAIVHIINQP-RLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
+LPA++ II+ P R P+VLV+APTRELAQQI++V + +R C +GG K
Sbjct: 165 LLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGK 224
Query: 193 GPQGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWCWMRLIECWTWAXXXXXXXXXX 372
Q R L GV+IVI TPGRL R+ + L+ L E
Sbjct: 225 IDQSRILRNGVDIVIGTPGRLNDLLRKHHLSSVQYLV-----LDEADRMLDMGFMPQIES 279
Query: 373 XXXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLEL 507
I K Q EV+ LA +FL D I+ +GS EL
Sbjct: 280 LIDQIPKE--RQTLMFSATWPKEVKLLASKFLKDPIKITVGSQEL 322
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
D L K +L YLVLDEADRMLDMGF PQI +I+QI +RQ LM+SATW
Sbjct: 247 DLLRKH--HLSSVQYLVLDEADRMLDMGFMPQIESLIDQIPKERQTLMFSATW 297
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 76.6 bits (180), Expect = 8e-13
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLR----DDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGG 183
++P +V I P++ R D GP ++LAPTRELAQQI++ +FG+ + +R + GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 184 APKGPQGRCLERGVEIVIATPGRLL 258
+ QG L G EIVIATPGRL+
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLI 530
Score = 60.5 bits (140), Expect = 6e-08
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 392
ID LE L RCTY+VLDEADRM+DMGFEP ++KI+E + Q
Sbjct: 530 IDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQ 575
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
TNLRR TY+VLDEADRM DMGFEPQI +I+ +RPDRQ +M+SAT+
Sbjct: 476 TNLRRVTYIVLDEADRMFDMGFEPQITRILANLRPDRQTVMFSATF 521
Score = 66.5 bits (155), Expect = 9e-10
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
ILP + HI Q L DGPI +++ PTREL QI + A +G+++ ++GG+
Sbjct: 385 ILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGFNAVSVYGGSGIA 444
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EIV TPGR++
Sbjct: 445 AQIGELKRGAEIVACTPGRMI 465
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
TNLRR TY+VLDEADRM DMGFEPQI +I+ +RPDRQ +M+SAT+
Sbjct: 263 TNLRRVTYMVLDEADRMFDMGFEPQITRILANLRPDRQTVMFSATF 308
Score = 64.1 bits (149), Expect = 5e-09
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
ILP + HI Q L DGPI +++ PTREL QI + +G+++ ++GG+
Sbjct: 172 ILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDCKRYGKAMGFSAVSVYGGSGIA 231
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EIV TPGR++
Sbjct: 232 AQIGDLKRGAEIVACTPGRMI 252
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = +1
Query: 19 LPAIVHIINQPRLL----RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
+PAI+H++ + + + + P LVL+PTRELA QI V E G+ +++ C++GG+
Sbjct: 170 IPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGS 229
Query: 187 PKGPQGRCLERGVEIVIATPGRL 255
KGPQ + GV+IVI TPGRL
Sbjct: 230 SKGPQISAIRSGVDIVIGTPGRL 252
Score = 64.9 bits (151), Expect = 3e-09
Identities = 40/109 (36%), Positives = 59/109 (54%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXX 437
D +E L +++VLDEADRMLDMGFE +R I+ RQ++M+SATW P
Sbjct: 254 DLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATW---PLDV 310
Query: 438 GSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
P + A ANH+++QI++V +E ++ +LI LL
Sbjct: 311 HKLAQEFMDPNPIKVIIGSVDLA-ANHDVMQIIEVLDERARDQRLIALL 358
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 75.8 bits (178), Expect = 1e-12
Identities = 45/109 (41%), Positives = 65/109 (59%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXXGSXESS* 458
TNLRR T+LV+DEADRM DMGFEPQI +II+ IRP+RQ +++SAT+ P
Sbjct: 675 TNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATF--PRQVETLARKVL 732
Query: 459 RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLLTXISSEG 605
P + ++ N +I Q+V+V E ++ +L+ LL S +G
Sbjct: 733 NKPVEIQVGGR----SVVNKDITQLVEVRPESDRFLRLLELLGEWSEKG 777
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + HI +QP + DGPI LV+APTREL QQI +F + + +R ++GG+
Sbjct: 584 VLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVA 643
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EIV+ TPGR++
Sbjct: 644 QQISELKRGTEIVVCTPGRMI 664
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/81 (45%), Positives = 51/81 (62%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP HI +QP L DGPI L++ PTRELA QI + F + + +R C +GGAP
Sbjct: 652 LLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIR 711
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EI++ TPGR++
Sbjct: 712 EQIAELKRGAEIIVCTPGRMI 732
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
TNL+R TY+VLDEADRM DMGFEPQ+ KI +RPDRQ +++SAT
Sbjct: 743 TNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFSAT 787
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 75.4 bits (177), Expect = 2e-12
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P VLVL+PTRELA QI Q N +G+++ R T IFGG + PQ R L+RGV + IATPGR
Sbjct: 70 PQVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGR 129
Query: 253 LL 258
LL
Sbjct: 130 LL 131
Score = 50.0 bits (114), Expect = 8e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D +++ +L + VLDEADRMLDMGF P ++ I+ ++ RQ + ++AT
Sbjct: 131 LDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFFTAT 183
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 75.4 bits (177), Expect = 2e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 282 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
NL+ TYLVLDEAD+MLDMGFEPQI KI+ +RPDRQ +M SATW
Sbjct: 386 NLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATW 430
Score = 64.9 bits (151), Expect = 3e-09
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLL-RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
++P +H++ QP L + + P +LVL PTRELA Q++ ++ +R+ C++GG +
Sbjct: 297 LMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYK-GLRSVCVYGGGNR 355
Query: 193 GPQGRCLERGVEIVIATPGRL 255
Q L++GV+I+IATPGRL
Sbjct: 356 DEQIEELKKGVDIIIATPGRL 376
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIH-VRNTCIFGGAPKG 195
+P + H + QP + R DGP+ LVLAPTRELAQQI++ F +S+ ++N + GG
Sbjct: 174 IPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIE 233
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L GVEI +ATPGR +
Sbjct: 234 KQRSELRAGVEIAVATPGRFI 254
Score = 67.3 bits (157), Expect = 5e-10
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID L++ T+L R +Y+VLDEADRMLDMGFEPQIR+I+ + Q L++SAT
Sbjct: 254 IDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSAT 306
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 74.5 bits (175), Expect = 3e-12
Identities = 30/81 (37%), Positives = 57/81 (70%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+ P I H+++Q +L +DGPI ++L PTREL+ Q++ A+ + +++ ++ ++GG+ G
Sbjct: 624 LFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNEASIYCKAVDLKILAVYGGSNIG 683
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L++GVEI++ TPGR++
Sbjct: 684 AQLNVLKKGVEIIVGTPGRII 704
Score = 62.9 bits (146), Expect = 1e-08
Identities = 40/104 (38%), Positives = 57/104 (54%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXXGSXES 452
+ TNL R +++VLDEADR+LD+GFE QI I+ R D+Q M SAT+ P +
Sbjct: 713 KVTNLNRASFIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATF--PNYIQNLAKK 770
Query: 453 S*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
P + + N+NI Q V+V EE +K +L+ LL
Sbjct: 771 LLYKPIEIIVGEK----GKTNNNIYQFVEVLEEKKKLFRLLKLL 810
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
TNL R TYLVLDEADRM DMGFEPQ+ KI+ IRPDRQ +++SAT+
Sbjct: 622 TNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFSATF 667
Score = 67.7 bits (158), Expect = 4e-10
Identities = 31/81 (38%), Positives = 52/81 (64%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP HI +Q + +GP+ +++ PTRELA QI + F +++ +R C++GGAP
Sbjct: 531 LLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPIS 590
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q +++ +IV+ATPGRL+
Sbjct: 591 EQIAEMKKTADIVVATPGRLI 611
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 74.1 bits (174), Expect = 4e-12
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP+I ++ P+ G +L+L+PTRELA QI + N++ + + + +FGG P G
Sbjct: 62 LPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGR 121
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q R L+RG +I++ATPGRLL
Sbjct: 122 QMRMLDRGTDILVATPGRLL 141
Score = 44.4 bits (100), Expect = 0.004
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D +++ L+ VLDEAD+MLD+GF +R+I + + +RQ L +SAT
Sbjct: 141 LDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQTLFFSAT 193
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 74.1 bits (174), Expect = 4e-12
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 22 PAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQ 201
PAIVHI++QP L +GP+ +++ PTRELA Q+ Q A +F + ++ C +GG K Q
Sbjct: 322 PAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQ 381
Query: 202 GRCLE-RGVEIVIATPGRLL 258
L+ G E+V+ TPGR++
Sbjct: 382 SNELQNEGAEMVVCTPGRII 401
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +3
Query: 198 TGQMS*EGSGNCYCYSW*TIDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
+ ++ EG+ C ID ++ TN R T+LV DEADRM DMGFE Q++ I + +
Sbjct: 382 SNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHV 441
Query: 378 RPDRQVLMWSATW 416
RPDRQ LM+SAT+
Sbjct: 442 RPDRQCLMFSATF 454
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +3
Query: 270 KETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPP 428
+ TNLRR T+LVLDEADRM DMGF PQI I++ IRPDRQ +M+SAT+ PP
Sbjct: 652 RRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATF--PP 702
Score = 73.3 bits (172), Expect = 8e-12
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP HI+ QP+ +G I L+++PTRELA QI +F + + +R C++GGA
Sbjct: 564 LLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASIS 623
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG +IV+ TPGR++
Sbjct: 624 EQIAELKRGADIVVCTPGRMI 644
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 74.1 bits (174), Expect = 4e-12
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRD---DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
++P +++I QPRL +D DGP LV+APTREL QQI++ F Q R + GG
Sbjct: 468 VIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQ 527
Query: 187 PKGPQGRCLERGVEIVIATPGRL 255
Q + +G EI+IATPGRL
Sbjct: 528 SIEDQAYQVSKGCEIIIATPGRL 550
Score = 50.8 bits (116), Expect = 5e-05
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE 371
D LEK L +C Y+VLDEAD M+D+GFEPQ+ +++
Sbjct: 552 DCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLD 589
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 73.7 bits (173), Expect = 6e-12
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = +1
Query: 19 LPAIVHIINQ--PRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
+PA++H+ + + + P VLVL+PTRELAQQI V E G + + C++GG K
Sbjct: 148 VPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSK 207
Query: 193 GPQGRCLERGVEIVIATPGRL 255
GPQ L+ GV+IVI TPGR+
Sbjct: 208 GPQISALKSGVDIVIGTPGRM 228
Score = 70.9 bits (166), Expect = 4e-11
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXX 437
D +E L +++VLDEADRMLDMGFEP++R I+ Q RQ +M+SATW PP
Sbjct: 293 DLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATW--PPAVH 350
Query: 438 G-SXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
+ E P + + ANH+++QIV+V ++ ++ +L+ LL
Sbjct: 351 QLAQEFMDPNPIKVVIGSEDLA---ANHDVMQIVEVLDDRSRDSRLVALL 397
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GPGHNILPAIVHI-INQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIF 177
GP + L + V I I P ++D I + + +++ I V E G + + C++
Sbjct: 208 GPQISALKSGVDIVIGTPGRMKD--LIEMGICRLNDVSFVIADVLCEAGAPCGISSVCLY 265
Query: 178 GGAPKGPQGRCLERGVEIVIATPGRL 255
GG KGPQ L+ GV+IVI TPGR+
Sbjct: 266 GGTSKGPQISALKSGVDIVIGTPGRM 291
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 73.3 bits (172), Expect = 8e-12
Identities = 33/81 (40%), Positives = 52/81 (64%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + HI +QP ++ DGPI L++APTREL QQI +F + + + ++GG+
Sbjct: 539 VLPMLRHIKDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVGISCVPVYGGSGVA 598
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG E+V+ TPGR++
Sbjct: 599 QQISELKRGAEVVVCTPGRMI 619
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 73.3 bits (172), Expect = 8e-12
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
I+ +++ NL + T L+LDEADRMLDMGFEPQ+R I+ IR DRQ ++ SATW
Sbjct: 211 IELIDEGMVNLNKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILLSATW 264
Score = 53.2 bits (122), Expect = 9e-06
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 17/98 (17%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQI-------------QQVANEFGQSIH 156
+LPA+VH+ ++ P +L+L PTREL QI + NE S +
Sbjct: 114 LLPALVHLEQHAMIMESPQPKLLILVPTRELGVQIYDQLLQLIEFYYGNKKQNEKENSPN 173
Query: 157 VRN---TCIFGGAP-KGPQGRCLERGVEIVIATPGRLL 258
+ N CI+GG P K Q +++G+ +++ATPGRL+
Sbjct: 174 LTNLKIVCIYGGNPNKKQQVELIQKGIHVIVATPGRLI 211
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 72.9 bits (171), Expect = 1e-11
Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIH-VRNTCIFGGAPK 192
+LP+I ++ +P + + GP VLVL PTRELA Q+++ A +G+ + R C+ GGAP
Sbjct: 56 LLPSIQRLLAEPAV-KSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPY 114
Query: 193 GPQGRCLERGVEIVIATPGRLL 258
G Q + L + V++V+ATPGRL+
Sbjct: 115 GLQLKRLSQPVDVVVATPGRLI 136
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID LE+ + R LVLDEADRMLDMGF I+ I + +RQ L++SAT
Sbjct: 136 IDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPAERQTLLFSAT 188
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 72.9 bits (171), Expect = 1e-11
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +3
Query: 270 KETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
K +TNLRR TYL LDEADRMLDMGFE +R I + +RPDRQ +M+SAT
Sbjct: 198 KNSTNLRRVTYLALDEADRMLDMGFEKIVRSICQAVRPDRQCVMFSAT 245
Score = 72.1 bits (169), Expect = 2e-11
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQ-SIHVRNTC-IFGGAP 189
+LPA I Q L + +GPI LVLAPTRELA QI A++F + + C IFGG
Sbjct: 110 LLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKFTKFGVSGARCCAIFGGVS 169
Query: 190 KGPQGRCLERGVEIVIATPGRLL 258
K Q + L G EIV+ATPGRL+
Sbjct: 170 KRDQFKKLRAGAEIVVATPGRLV 192
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 72.9 bits (171), Expect = 1e-11
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+DFLE NL +C Y+V+DEADR+LDMGFE Q+RKI+ Q+ ++Q+L +ATW
Sbjct: 263 LDFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATW 316
Score = 58.0 bits (134), Expect = 3e-07
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLI 261
L+L PTREL Q+ F +++ +++ ++GG PK Q L++G +I++ATPGRLL
Sbjct: 205 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 264
Query: 262 F 264
F
Sbjct: 265 F 265
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 72.9 bits (171), Expect = 1e-11
Identities = 44/102 (43%), Positives = 61/102 (59%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXXGSXESS* 458
TNL+R TY+VLDEADRM DMGFEPQ+ K+ IRP+RQ +++SAT P + +
Sbjct: 700 TNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSAT--MPRIMDALAKKTL 757
Query: 459 RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
+ P + ++ I QIV+V EE EK +L+ LL
Sbjct: 758 QSPVEIVVGGR----SVVAPEITQIVEVREEKEKFHRLLELL 795
Score = 70.5 bits (165), Expect = 5e-11
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP HI +Q L DGPI L++ PTRELA QI + F +++ +R C +GGA
Sbjct: 609 LLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIK 668
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EI++ TPGR++
Sbjct: 669 DQIADLKRGAEIIVCTPGRMI 689
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 72.9 bits (171), Expect = 1e-11
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
T LRR T++VLDEADRM DMGFEPQI+KI QIRPD+Q +++SAT+
Sbjct: 534 TTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATF 579
Score = 67.3 bits (157), Expect = 5e-10
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + HI +Q +GPI LVL+PTRELA QI++ +F ++ ++ C +GG+
Sbjct: 443 VLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIE 502
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RGV +++ATPGRL+
Sbjct: 503 NQISELKRGVNVIVATPGRLI 523
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 4/58 (6%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP----DRQVLMWSATW 416
+DF+EK +L C Y+VLDEADRMLDMGFEPQIRKIIE+ +RQ LM+SAT+
Sbjct: 323 VDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATF 380
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +1
Query: 16 ILPAIVHII----NQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGG 183
++P I H++ NQ R + P L+LAPTRELA QI + +F + +R+ ++GG
Sbjct: 239 LIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGG 298
Query: 184 APKGPQGRCLERGVEIVIATPGRLLIF 264
A Q R ++ G +++ATPGRL+ F
Sbjct: 299 ADTHSQIREVQMGCHLLVATPGRLVDF 325
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
D + NLR TYLVLDEAD+MLD+GFE QI KI+ +RPDRQ +M SATW
Sbjct: 441 DLQMNKCVNLRSITYLVLDEADKMLDLGFEGQITKILLDVRPDRQTVMTSATW 493
Score = 64.9 bits (151), Expect = 3e-09
Identities = 30/81 (37%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRD-DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
++P +H+ +QP + +GP +LVL PTRELA Q++ +++ +++ C++GG +
Sbjct: 360 LIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECSKYSYK-GLKSVCVYGGGNR 418
Query: 193 GPQGRCLERGVEIVIATPGRL 255
Q + + +GV+I+IATPGRL
Sbjct: 419 KEQIQHITKGVDIIIATPGRL 439
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 71.3 bits (167), Expect = 3e-11
Identities = 29/81 (35%), Positives = 55/81 (67%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+ P I H+++Q L +DGPI ++L PTREL+ Q++ A + +++++ ++GG+
Sbjct: 778 LFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSNIA 837
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q + L++GVEI++ TPGR++
Sbjct: 838 RQLKVLKKGVEILVGTPGRII 858
Score = 61.3 bits (142), Expect = 3e-08
Identities = 39/104 (37%), Positives = 57/104 (54%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXXGSXES 452
+ TNL R +++VLDEADR+LD+GFE QI I+ R D+Q M SAT+ P +
Sbjct: 867 KVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATF--PNYIQNMAKK 924
Query: 453 S*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
P + + N+NI Q V++ EE +K +L+ LL
Sbjct: 925 LLYKPIEIIVGEK----GKTNNNIYQFVEIIEESKKVFRLLKLL 964
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 70.9 bits (166), Expect = 4e-11
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
DF+E+ L R T LVLDEADRMLD+GFEP+IR I R DRQ +M+SATW
Sbjct: 164 DFMEEGVIKLDRVTMLVLDEADRMLDLGFEPEIRAIAGATRADRQTVMFSATW 216
Score = 70.5 bits (165), Expect = 5e-11
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
+PA+ I +QP + PI LVLAPTRELAQQ +V ++ G++ VR C++GGAPK
Sbjct: 83 MPALTQIHSQPPC-KPGQPICLVLAPTRELAQQTAKVFDDAGEASGVRCVCVYGGAPKYE 141
Query: 199 QGRCLER--GVEIVIATPGRLLIF 264
Q ++ G +++ATPGRL F
Sbjct: 142 QKAQMKAGGGAAVIVATPGRLRDF 165
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 70.9 bits (166), Expect = 4e-11
Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Frame = +3
Query: 255 IDFLEKET---TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
ID L+ + + RR TY+VLDEADRM DMGFEPQ+ KI+ IRPDRQ +++SAT+
Sbjct: 645 IDLLQSNSGRVLSFRRITYVVLDEADRMFDMGFEPQVMKILASIRPDRQTILFSATF 701
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
+P I H+++Q L DGPI L+LAPTREL+ QI F + + C +GG P
Sbjct: 565 IPMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVNELKPFLNASGITIKCAYGGQPISD 624
Query: 199 QGRCLER-GVEIVIATPGRLL 258
Q ++R G+ I+ AT GRL+
Sbjct: 625 QIAMIKRGGIHILCATAGRLI 645
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 70.5 bits (165), Expect = 5e-11
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +1
Query: 64 DDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIAT 243
D GP LVL PTRELA Q+ + + +G+ + R ++GGAP G Q R L +GV++V+AT
Sbjct: 126 DHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQGVDVVVAT 185
Query: 244 PGRLL 258
PGR L
Sbjct: 186 PGRAL 190
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + + T L +VLDEAD MLDMGF I I+EQ RQ +++SAT
Sbjct: 190 LDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQTVLFSAT 242
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 70.5 bits (165), Expect = 5e-11
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
ID L N+++ +YLV+DEADRM D+GFEPQ+ +I E++R DRQ LM+SAT+
Sbjct: 235 IDLLSSSAFNIKKVSYLVIDEADRMFDLGFEPQVIRIAERMRKDRQTLMFSATF 288
Score = 52.4 bits (120), Expect = 2e-05
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
I+P ++H++ QP + + V +L+PTRELA Q + + ++ C+ GG
Sbjct: 156 IIPCLLHVLAQPPTGQYEAAAV-ILSPTRELAYQTHIECQKIFSLMDKKSACLVGGNDIE 214
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q R ++ G ++IATPGR +
Sbjct: 215 NQLRAIKNGSNVIIATPGRFI 235
>UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10,
partial; n=1; Danio rerio|Rep: PREDICTED: similar to
Pl10, partial - Danio rerio
Length = 245
Score = 70.1 bits (164), Expect = 7e-11
Identities = 37/71 (52%), Positives = 44/71 (61%)
Frame = +1
Query: 61 RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIA 240
R PI LVLAPTRELA QI A +F HVR ++GGA G Q R LERG +++A
Sbjct: 167 RKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVA 226
Query: 241 TPGRLLIFWRR 273
TPGRL+ R
Sbjct: 227 TPGRLVDMMER 237
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 70.1 bits (164), Expect = 7e-11
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+DFL + T L +YLV+DEADR+L++GFE IR+I++QIR DRQ + +SATW
Sbjct: 235 LDFLREGATTLANVSYLVIDEADRLLELGFEDTIREIVQQIRFDRQTVFFSATW 288
Score = 60.5 bits (140), Expect = 6e-08
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Frame = +1
Query: 16 ILPAIVHIINQP-----RLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFG 180
+LP ++ I +Q + +GP +L+L PTRELA QI+ F Q+ ++ CI+G
Sbjct: 149 LLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIESEIQLFTQNYRLKTLCIYG 208
Query: 181 GA-PKGPQGRCLERGVEIVIATPGRLLIFWRRRQRTCAD 294
G + Q L R I++ATPGRLL F R T A+
Sbjct: 209 GINNRKNQFYNLGRFPNILVATPGRLLDFLREGATTLAN 247
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 69.7 bits (163), Expect = 9e-11
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRD-DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
++P +HI +QP L R +GP +LVL PTRELA Q+ +E+ +++ CI+GG +
Sbjct: 296 LMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYR-GLKSVCIYGGGDR 354
Query: 193 GPQGRCLERGVEIVIATPGRL 255
Q + L +G +I+IATPGRL
Sbjct: 355 DGQIKDLSKGADIIIATPGRL 375
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +3
Query: 285 LRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWS 407
L+ TYLVLDEAD+MLDMGFEPQI KI+ +RPDRQ +M S
Sbjct: 386 LKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTS 426
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 69.7 bits (163), Expect = 9e-11
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +1
Query: 16 ILPAIVHIINQPRL-----LRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFG 180
+LP +V+I PRL + DGP ++LAPTRELAQQI+ A +F + I G
Sbjct: 432 LLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARKFCNPLGFNVVSIVG 491
Query: 181 GAPKGPQGRCLERGVEIVIATPGRLLIFWRRR 276
G Q L G EI+IATPGRL+ RR
Sbjct: 492 GHSLEEQSFSLRNGAEIIIATPGRLVDCIERR 523
Score = 48.0 bits (109), Expect = 3e-04
Identities = 17/41 (41%), Positives = 30/41 (73%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
+D +E+ L +C Y+++DEADRM+D+GFE + KI++ +
Sbjct: 517 VDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDAL 557
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/80 (40%), Positives = 50/80 (62%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP + ++ R + P L+L PTRELA QI + + + +++++ IFGG + P
Sbjct: 60 LPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNP 119
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q R L+ GV+I+IATPGRL+
Sbjct: 120 QVRALQGGVDILIATPGRLM 139
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D ++ L R VLDEADRMLDMGF I+KI+ + R L +SAT
Sbjct: 139 MDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHNLFFSAT 191
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 69.3 bits (162), Expect = 1e-10
Identities = 28/54 (51%), Positives = 42/54 (77%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+D LE +L RC Y+V+DEADR+LDMGFE Q++KI+ Q+ ++Q+L ++ATW
Sbjct: 463 LDLLESGVIHLLRCIYVVIDEADRLLDMGFEKQLKKIMTQVNRNKQLLFFTATW 516
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L+L PTREL Q+ F + +H+R+ ++GG PK Q L++G +IV+ATPGRLL
Sbjct: 405 LILLPTRELCMQVVDEIKAFEKELHIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLL 463
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 69.3 bits (162), Expect = 1e-10
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
TN+RR TY+V+DEADRM DMGFEPQ+ KII +RP Q +++SAT+
Sbjct: 549 TNVRRTTYIVMDEADRMFDMGFEPQVMKIINNVRPSAQKVLFSATF 594
Score = 66.9 bits (156), Expect = 7e-10
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + H+ +Q + +GPI +V++PTRELA QI + F + +++R +C GG+
Sbjct: 458 LLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSIS 517
Query: 196 PQGRCLERGVEIVIATPGRLL 258
+++G E+VI TPGR++
Sbjct: 518 EDIAAMKKGAEVVICTPGRMI 538
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 68.9 bits (161), Expect = 2e-10
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
DFL++ +L + TYLV+DEADR+LDMGFE +R I+++ R DRQ + +SATW
Sbjct: 240 DFLQEGILDLSKVTYLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSATW 292
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +1
Query: 61 RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIA 240
R +GP +L+LAPTREL QI Q + F + ++ +GG + Q + ++R +I++A
Sbjct: 174 RINGPEILILAPTRELVMQIAQQVSLFMKPNNLTVATAYGGQNRDQQAQQIKRNPDILVA 233
Query: 241 TPGRLLIF 264
PGRL F
Sbjct: 234 CPGRLKDF 241
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
PI+L LAPTRELA+QI + G H+ TCI+GG PQ + RG+++V+ TPGR
Sbjct: 175 PIILALAPTRELAKQISEYFEAIGP--HLSTTCIYGGTSYWPQESAIRRGLDVVVGTPGR 232
Query: 253 LLIFWRR 273
+L + R+
Sbjct: 233 ILDYIRK 239
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKII------EQIRPDRQVLMWSAT 413
+D++ K T +L + ++VLDE DRMLDMGF + +I+ E+ + Q L++SAT
Sbjct: 234 LDYIRKNTLDLSKLKHVVLDEVDRMLDMGFAESVEEILGAAYKTEEAPNNPQTLLFSAT 292
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVLAPTRELA QI + +G ++ +R IFGG + PQ R LE+G++I++ATPGRLL
Sbjct: 79 LVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLL 137
Score = 42.3 bits (95), Expect = 0.016
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + + +L + VLDE D+MLDMG +++II + +RQ +++SAT
Sbjct: 137 LDLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQNMLFSAT 189
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP I +I P + L PTRELA QI + +F + ++ TC+FGGAP
Sbjct: 176 MLPVITQLIGT---CHSPNPSCVALCPTRELAIQIFEETRKFCKGTDLKTTCVFGGAPIT 232
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q R L RG++IVIATPGRL+
Sbjct: 233 EQIRNLSRGIDIVIATPGRLI 253
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE--QIRP--DRQVLMWSATW 416
ID L++ L +L+LDEADRMLDMGFEPQ++++I + P DRQ +++SAT+
Sbjct: 253 IDILKQHCITLSEVRFLILDEADRMLDMGFEPQMQEVINGWDMPPADDRQTMLFSATF 310
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRD---DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
+LP + +I P + + +GP +V+APTRELAQQI++ +F + R T I GG
Sbjct: 368 VLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQ 427
Query: 187 PKGPQGRCLERGVEIVIATPGRLLIFWRRR 276
QG + +G EIVIATPGRL+ RR
Sbjct: 428 SIEEQGLKITQGCEIVIATPGRLIDCLERR 457
Score = 54.0 bits (124), Expect = 5e-06
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE 371
ID LE+ L +C Y+VLDEADRM+DMGFEPQ+ +++
Sbjct: 451 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLD 489
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 68.1 bits (159), Expect = 3e-10
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP I H+ Q L DGPI L+L PTRELA QI A F ++ +FGG
Sbjct: 762 LLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPFLKAYKYEIVAVFGGTGIK 821
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+RG EIV+ATPGRL+
Sbjct: 822 GQLSELKRGCEIVVATPGRLI 842
Score = 66.1 bits (154), Expect = 1e-09
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
TNL+R T +V+DEADRM D+GFEPQI KI+ RPD+Q +++SAT+
Sbjct: 853 TNLKRITMVVIDEADRMFDLGFEPQIAKILATTRPDKQTVLFSATF 898
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 68.1 bits (159), Expect = 3e-10
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP + + Q R P LVL PTRELA Q+ G S+ +R + + GG P G
Sbjct: 202 LPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGDSLDLRLSVVVGGVPYGR 261
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q L+RG++++IATPGRL+
Sbjct: 262 QIAALQRGIDVLIATPGRLV 281
Score = 49.6 bits (113), Expect = 1e-04
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D ++++ +L VLDEAD M D+GF P +R I+E +P Q + +SAT
Sbjct: 281 VDLIDRDAVSLAEVDVAVLDEADHMADLGFLPNVRAILEGTKPGGQRMFFSAT 333
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 67.7 bits (158), Expect = 4e-10
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +1
Query: 40 INQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLER 219
I +PR +R P+ ++L+PTRELA QI A +F V+ +GG P Q R LER
Sbjct: 214 IERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELER 273
Query: 220 GVEIVIATPGRL 255
GV+I++ATPGRL
Sbjct: 274 GVDILVATPGRL 285
Score = 60.5 bits (140), Expect = 6e-08
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RPD---RQVLMWSATW 416
D LE+ +L+ +L LDEADRMLDMGFEPQIRKI++Q+ P RQ +++SAT+
Sbjct: 287 DLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATF 343
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 67.7 bits (158), Expect = 4e-10
Identities = 36/71 (50%), Positives = 44/71 (61%)
Frame = +1
Query: 61 RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIA 240
R PI LVLAPTRELA QI + A +F VR ++GGA G Q R LERG +++A
Sbjct: 263 RKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVA 322
Query: 241 TPGRLLIFWRR 273
TPGRL+ R
Sbjct: 323 TPGRLVDMMER 333
Score = 64.1 bits (149), Expect = 5e-09
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ--IRPD--RQVLMWSATW 416
+D +E+ L C YLVLDEADRMLDMGFEPQIR+I+EQ + P R +M+SAT+
Sbjct: 328 VDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 385
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 67.3 bits (157), Expect = 5e-10
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRD---DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
++P I ++ P+L + GP LVLAPTRELA QIQ+ + +R C GG
Sbjct: 231 LIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETLKLATPFGLRVCCCIGGE 290
Query: 187 PKGPQGRCLERGVEIVIATPGRL 255
P PQ L G EIV+A PGRL
Sbjct: 291 PMQPQIEELSNGAEIVVAAPGRL 313
Score = 40.3 bits (90), Expect = 0.065
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
D L + L +C ++VLDEAD+M+D+G + Q+R I ++
Sbjct: 315 DLLNQSYLVLGQCYFVVLDEADKMIDLGLDVQVRYIFSEL 354
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 67.3 bits (157), Expect = 5e-10
Identities = 29/68 (42%), Positives = 46/68 (67%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+ L+LAPTREL QQI + A F + +R+ C++GG+ Q + + +G +I++ATPGR
Sbjct: 213 PVALILAPTRELGQQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGR 272
Query: 253 LLIFWRRR 276
LL F ++
Sbjct: 273 LLYFTEKK 280
Score = 59.7 bits (138), Expect = 1e-07
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
Frame = +3
Query: 261 FLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE--QIRP--DRQVLMWSATW 416
F EK+ +L YL+ DEADRMLDMGFEPQIR+I E ++ P RQ LM+SAT+
Sbjct: 276 FTEKKIVSLSSVRYLIFDEADRMLDMGFEPQIREICEDNEMPPVGKRQTLMFSATF 331
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 67.3 bits (157), Expect = 5e-10
Identities = 37/80 (46%), Positives = 46/80 (57%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP + + PR +G VLVLAPTREL QI F + VR T IFGG +
Sbjct: 63 LPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVH 122
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q + LE GV+I++A PGRLL
Sbjct: 123 QVKALEEGVDIIVAAPGRLL 142
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
+D +E+ +L + LVLDEAD+MLDMGF I +I+ + DR +++SAT P
Sbjct: 142 LDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDRHTVLFSAT--MPKSI 199
Query: 435 XGSXESS*RVPA 470
ES R PA
Sbjct: 200 AALVESLLRNPA 211
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 67.3 bits (157), Expect = 5e-10
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDD-GPIVLVLAPTRELAQQIQQVANEFG-QSIHVRNTCIFGGAP 189
ILP + I Q L +++ GP+ L+LAPTRELA QI + +F Q +R C GG+
Sbjct: 332 ILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINEEVEKFTKQDRSIRTICCTGGSE 391
Query: 190 KGPQGRCLERGVEIVIATPGRLL 258
Q L+RGVEIV+ATPGRL+
Sbjct: 392 MKKQINDLKRGVEIVVATPGRLI 414
Score = 61.7 bits (143), Expect = 2e-08
Identities = 24/43 (55%), Positives = 38/43 (88%)
Frame = +3
Query: 288 RRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+R T++V+DEADR+ DMGFEPQI +I++ +RPD+Q +++SAT+
Sbjct: 428 KRITFVVMDEADRLFDMGFEPQITQIMKTVRPDKQCVLFSATF 470
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 67.3 bits (157), Expect = 5e-10
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDD---GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
I+P I+ I P L + GP +VLAPTRELAQQIQ N+F + + R + GG
Sbjct: 304 IIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGH 363
Query: 187 PKGPQGRCLERGVEIVIATPGRLLIFWRRR 276
Q + +G IV+ATPGRLL RR
Sbjct: 364 AFEEQSFQMSQGAHIVVATPGRLLDCLERR 393
Score = 52.8 bits (121), Expect = 1e-05
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
+D LE+ L +CTY+V+DEADRMLDMGFE + KI+ +
Sbjct: 387 LDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSL 427
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 66.9 bits (156), Expect = 7e-10
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+ LVLAPTRELA QI + +G+ + +R+ I+GG +G Q + L+RG I++ATPGR
Sbjct: 76 PLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGR 135
Query: 253 LL 258
LL
Sbjct: 136 LL 137
Score = 53.6 bits (123), Expect = 6e-06
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D + + L + VLDEADRMLDMGF P +++II Q+ RQ L +SAT A
Sbjct: 137 LDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQSLFFSATLA 191
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 66.9 bits (156), Expect = 7e-10
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP I H +QPR + +GPI LVL PT+ELA Q+ + +E G++ +R +G
Sbjct: 103 LPLIRHCADQPRCEKGEGPIGLVLVPTQELAMQVFTLLDELGEAARLRCVASYGSTSLSD 162
Query: 199 QGRCLERGVEIVIATPGRLL 258
R + G E+++ATPGRLL
Sbjct: 163 NIRHAKVGCELMVATPGRLL 182
Score = 46.4 bits (105), Expect = 0.001
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+T +L R +++++DEADR+ D GF + ++ IRPDR M SAT
Sbjct: 191 KTLSLSRVSFVIVDEADRLFDSGFMEHVEAFLKNIRPDRVTGMISAT 237
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 66.9 bits (156), Expect = 7e-10
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = +3
Query: 282 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+L R T+LV+DEADRM DMGFEPQ+ K+ + IRPDRQ +++SAT+
Sbjct: 533 SLSRVTFLVIDEADRMFDMGFEPQVLKLTQSIRPDRQTVLFSATF 577
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+ +++ PTREL QI + F ++ + C +GG+P Q L++G I++ TPGR
Sbjct: 460 PLGVIITPTRELCVQIYRDLRPFLAALELTAVCAYGGSPIKDQIAALKKGTHIIVCTPGR 519
Query: 253 LL 258
++
Sbjct: 520 MI 521
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 66.5 bits (155), Expect = 9e-10
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 ILPAIVHIINQP-RLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
+LP +H+ QP +GP +LVL PTRELA Q+ ++ + ++ C++GG +
Sbjct: 130 LLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDY-KSVCVYGGGDR 188
Query: 193 GPQGRCLERGVEIVIATPGRL 255
Q +ERGV+IVIATPGRL
Sbjct: 189 KAQIHKVERGVDIVIATPGRL 209
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3
Query: 306 VLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
VLDEADRMLD+GFEPQI KI+ +RPDRQ +M SATW
Sbjct: 253 VLDEADRMLDLGFEPQIMKILLDVRPDRQTVMTSATW 289
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 66.5 bits (155), Expect = 9e-10
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +1
Query: 79 VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
VLVL+PTREL+ QI N +G+ I + +T GG P G Q R L +GVE+++ATPGRLL
Sbjct: 92 VLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSLMQGVEVLVATPGRLL 151
Score = 52.4 bits (120), Expect = 2e-05
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D ++ L +LVLDEADRMLDMGF IRKI+ ++ RQ L +SAT
Sbjct: 151 LDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSAT 203
>UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 560
Score = 66.5 bits (155), Expect = 9e-10
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 49 PRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIH-VRNTCIFGGAPKGPQGRCLERGV 225
PR+ R++G LVL PTRELA Q++ A G+ H V + I GG + + L +GV
Sbjct: 68 PRVTREEGTRGLVLVPTRELATQVEDTARRVGRPFHWVVTSSIMGGENRAKEKARLRKGV 127
Query: 226 EIVIATPGRLLIFWRRRQRTCADALIW 306
++IATPGRLL R + D L W
Sbjct: 128 SLLIATPGRLLDHLRMTESFNVDNLRW 154
Score = 40.3 bits (90), Expect = 0.065
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
E+ N+ +LVLDEADR+LD+GFE + I+ +I
Sbjct: 145 ESFNVDNLRWLVLDEADRLLDLGFEEDLNAILNEI 179
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 66.5 bits (155), Expect = 9e-10
Identities = 34/91 (37%), Positives = 49/91 (53%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPA+ H+++ PR + P +LVL PTRELA Q+ + A E Q H+ I GG
Sbjct: 59 LLPALQHLLDYPRR-KPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQ 117
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQRTC 288
G ++V+ATPGRLL + + C
Sbjct: 118 NHGDVFNTNQDLVVATPGRLLQYIKEENFDC 148
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+ ++++E + R L+ DEADRML MGF KI + R +Q L++SAT
Sbjct: 138 LQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLFSAT 190
>UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2;
Idiomarina|Rep: ATP-dependent RNA helicase - Idiomarina
loihiensis
Length = 409
Score = 66.1 bits (154), Expect = 1e-09
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPI-VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
+LPA+ H+++ PR + GP +LVLAPTRELA+QI + A +F + + + GG
Sbjct: 58 LLPALQHLLDFPR--QQPGPARILVLAPTRELAEQIHEQAKQFEAKTGLTSVVVTGGINY 115
Query: 193 GPQGRCLERGVEIVIATPGRLL 258
G Q LE+ +I++ATPGRL+
Sbjct: 116 GSQLSVLEKTHDILVATPGRLM 137
Score = 51.6 bits (118), Expect = 3e-05
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D LE E NL +L++DEADRMLDMGF ++++ Q R +Q L+ SAT
Sbjct: 137 MDLLEAEQYNLEGIEWLIIDEADRMLDMGFAATVKEMALQARHRQQSLLLSAT 189
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIH-VRNTCIFGGAPKGPQGRCLERGVEIVIATPG 249
P ++VLAPTRELA Q+ + FG+ + +R ++GG GPQ + LERG ++V+ TPG
Sbjct: 84 PQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQVVVGTPG 143
Query: 250 RLLIFWRRR 276
RL+ RR+
Sbjct: 144 RLMDHLRRK 152
Score = 41.5 bits (93), Expect = 0.028
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D L +++ L VLDEAD ML+MGF I+ I++ I Q+ ++SAT
Sbjct: 146 MDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFSAT 198
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 66.1 bits (154), Expect = 1e-09
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLI 261
LVL PTRELA Q+ + +GQ + +++T +FGG PQ L RG +I+IATPGR++
Sbjct: 81 LVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRRGADILIATPGRMMD 140
Query: 262 FWRRR 276
+ ++
Sbjct: 141 LYNQK 145
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D ++ + LVLDEADRMLDMGF I+KI+ + RQ L++SAT++
Sbjct: 139 MDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQNLLFSATFS 193
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 66.1 bits (154), Expect = 1e-09
Identities = 40/98 (40%), Positives = 55/98 (56%)
Frame = +3
Query: 291 RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGXXGSXESS*RVPA 470
+ Y+VLDEADRMLDMGFEPQI+KI + RQ +M++ATW P G ++ P
Sbjct: 251 KAAYVVLDEADRMLDMGFEPQIKKIFKLCPSARQTVMFTATW--PKGVQKIADAFTTKPI 308
Query: 471 *LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
+ AN +I Q V+V EE EK + + +L
Sbjct: 309 HIQIGSGGDK-LTANKSITQTVEVVEEEEKFDRCVAIL 345
Score = 63.7 bits (148), Expect = 6e-09
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P V+VLAPTRELA QI +F + R+ ++GGA KG Q R L G ++V+ATPGR
Sbjct: 173 PSVIVLAPTRELAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGR 232
Query: 253 L 255
L
Sbjct: 233 L 233
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 65.7 bits (153), Expect = 2e-09
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = +1
Query: 61 RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIA 240
R GP VLVL PTREL Q++ +FG+ VR+T I GG G Q L G +IVIA
Sbjct: 67 RPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTDIVIA 126
Query: 241 TPGRLLIFWRRRQ 279
T GRL+ F + ++
Sbjct: 127 TVGRLMDFIKEKE 139
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+DF++++ L L+LDE DRMLDMGF +++I+ RQ L +SAT
Sbjct: 132 MDFIKEKEIRLDSVEVLILDEVDRMLDMGFINDVKRIVGLCPKQRQTLFFSAT 184
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 65.7 bits (153), Expect = 2e-09
Identities = 33/58 (56%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RPD---RQVLMWSATW 416
+D +E+ +LR YL LDEADRMLDMGFEPQIRKI+EQ+ P RQ +++SAT+
Sbjct: 258 VDMIERARVSLRMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATF 315
Score = 63.7 bits (148), Expect = 6e-09
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P L+L+PTREL+ QI + A +F ++ +GGAP Q R LERGV+I++ATPGR
Sbjct: 197 PTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGR 256
Query: 253 LL 258
L+
Sbjct: 257 LV 258
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 65.7 bits (153), Expect = 2e-09
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRL---LRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
++P + +I P+L + GP L+L PTRELAQQI+ N+F + +R I GG
Sbjct: 322 LIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGR 381
Query: 187 PKGPQGRCLERGVEIVIATPGRL 255
Q L G EIVIATPGRL
Sbjct: 382 DMNDQAYALRDGAEIVIATPGRL 404
Score = 52.4 bits (120), Expect = 2e-05
Identities = 20/40 (50%), Positives = 31/40 (77%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
D +E+ L +CTY+V+DEAD+M+DMGFEPQ+ I++ +
Sbjct: 406 DCIERHVLVLSQCTYVVMDEADKMVDMGFEPQVNFILDSL 445
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVLAPTRELA QI A +G+ + GGA GPQ R +E GV++++ATPGRLL
Sbjct: 134 LVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLL 192
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3
Query: 303 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXP 425
+VLDEAD+MLD+GF P IR+I+ ++ RQ +M+SAT P
Sbjct: 208 VVLDEADQMLDLGFIPAIRQIMAKLPRQRQAVMFSATMPKP 248
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQVLMWSATWA 419
+DF+ K NL + YL+LDEADRMLDMGFEP+IRK++ + RQ LM+SAT+A
Sbjct: 411 LDFIGKGKINLSKVKYLILDEADRMLDMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFA 469
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P +++ PTREL QI A +F S VR ++GG G Q R LE+G +V+ TPGR
Sbjct: 350 PAAIIVGPTRELVNQIYLEARKFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGR 409
Query: 253 LLIF 264
LL F
Sbjct: 410 LLDF 413
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPI-VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
LP + H+I + + P+ L+L PTRELA QI + ++ + +++R+ +FGG
Sbjct: 57 LPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSIN 116
Query: 196 PQGRCLERGVEIVIATPGRLL 258
PQ L GV++++ATPGRLL
Sbjct: 117 PQMMKLRGGVDVLVATPGRLL 137
Score = 50.0 bits (114), Expect = 8e-05
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D + L + LVLDEADRMLDMGF IR+++ ++ RQ L++SAT++
Sbjct: 137 LDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFS 191
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 64.9 bits (151), Expect = 3e-09
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +1
Query: 28 IVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGR 207
I+ + Q + R+ P L+L PTRELAQQ+ ++ + +R C++GG G Q
Sbjct: 65 IIQAVQQKK--RNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKN 122
Query: 208 CLERGVEIVIATPGRLL 258
LE G +I+IATPGRLL
Sbjct: 123 KLEEGADILIATPGRLL 139
Score = 56.4 bits (130), Expect = 9e-07
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+D L N+ + LVLDEADRMLDMGF P +++I+ ++ D+Q++++SAT+
Sbjct: 139 LDHLFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDKQIMLFSATF 192
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 64.9 bits (151), Expect = 3e-09
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVL PTRELA Q+ + +G+ + +R+ +FGG P PQ + L GV++++ATPGRLL
Sbjct: 77 LVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLL 135
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D +++ + LVLDEADRMLDMGF I+KI+ + RQ LM+SAT++
Sbjct: 135 LDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATFS 189
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 64.9 bits (151), Expect = 3e-09
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVL PTRELA Q+ + +G+ + +R+ +FGG P PQ + L GV++++ATPGRLL
Sbjct: 77 LVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLL 135
Score = 51.6 bits (118), Expect = 3e-05
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D +++ + LVLDEADRMLDMGF I+KI+ + RQ LM+SAT++
Sbjct: 135 LDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLMFSATFS 189
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 64.9 bits (151), Expect = 3e-09
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3
Query: 282 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+L TY+VLDEADRMLDMGFE IR+I+ +IRPDR V + SATW
Sbjct: 233 SLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATW 277
Score = 63.7 bits (148), Expect = 6e-09
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Frame = +1
Query: 16 ILPAIVHIINQ-PRLLRDD-----GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIF 177
+LPA++HI Q + ++D P VLVL+PTRELAQQI+ ++ + + ++ C++
Sbjct: 139 LLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLY 197
Query: 178 GGAPKGPQGRCLERGVEIVIATPGRL 255
GG + Q GVEIVIATPGRL
Sbjct: 198 GGGSRPEQVEACRGGVEIVIATPGRL 223
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 64.9 bits (151), Expect = 3e-09
Identities = 35/93 (37%), Positives = 51/93 (54%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + ++ P L P V++++PTRELA QI A +F +++ ++GG
Sbjct: 300 LLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFR 359
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQRTCAD 294
Q C+ RG +VIATPGRLL F R T D
Sbjct: 360 HQNECITRGCHVVIATPGRLLDFVDRTFITFED 392
Score = 54.4 bits (125), Expect = 4e-06
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQVLMWSATW 416
+DF+++ ++VLDEADRMLDMGF +R+I+ + RP+ Q LM+SAT+
Sbjct: 380 LDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATF 435
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
+P + + PR D+ P L+L+PTRELA QI + S+ + I GG GP
Sbjct: 285 VPLLSRLSATPR--EDNRPRALILSPTRELAMQIADALSSLASSMGLSTILIAGGMSYGP 342
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q + +RGV++V+ATPGRL+
Sbjct: 343 QTKAFKRGVDLVVATPGRLV 362
Score = 41.5 bits (93), Expect = 0.028
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D LE +L VLDEAD M ++GF + I++ I D Q L++SAT
Sbjct: 362 VDLLETGDADLSGVAVTVLDEADHMAELGFMEAVGSILDAIPADGQRLLFSAT 414
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L+L PTRELA QIQ+ +G+ + +R+ IFGG + PQ L++GV+I++ATPGRLL
Sbjct: 76 LILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLL 134
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + +L R VLDEADRMLDMGF +R++++ + +Q L +SAT
Sbjct: 134 LDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTLFFSAT 186
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 64.5 bits (150), Expect = 3e-09
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRD---DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
+LP + ++ P L + DGP LV+AP+RELA QI + N+F R + GG
Sbjct: 753 VLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGR 812
Query: 187 PKGPQGRCLERGVEIVIATPGRL 255
Q L RGVEIVI TPGRL
Sbjct: 813 NAEAQAFELRRGVEIVIGTPGRL 835
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
D LEK T L +C Y++LDEADRM+DMGFE + I+++I
Sbjct: 837 DCLEKAYTVLNQCNYVILDEADRMMDMGFEDTVHYILDKI 876
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+DF+ K+ L T +VLDEADRMLDMGFE QI +I+ +R DRQ L +SATW
Sbjct: 568 LDFM-KDGLPLNSITQVVLDEADRMLDMGFEDQITQILSAVRDDRQTLFFSATW 620
Score = 54.4 bits (125), Expect = 4e-06
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP I+H QP++L GP +LVLAPTRELAQQIQ F R C++GG K
Sbjct: 488 LPGIIHSQAQPKVL---GPRILVLAPTRELAQQIQSQYELF-----TRTCCVYGGVFKNL 539
Query: 199 Q---------GRCLERGVEIVIATPGRLLIFWR 270
Q R ++I+TPGRLL F +
Sbjct: 540 QYSEILGIKESRNKINLPSVIISTPGRLLDFMK 572
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +1
Query: 52 RLLRDDGPI-VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVE 228
RL D P +LAPTRELAQQI++ + G + VR+TCI GG Q R L R
Sbjct: 142 RLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH 201
Query: 229 IVIATPGRLL 258
I+IATPGRL+
Sbjct: 202 IIIATPGRLM 211
Score = 41.1 bits (92), Expect = 0.037
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 IDFLEK-ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RPDRQVLMWSAT 413
+D LE + +LR+ +LV+DEADR+LDM F P + +I++ I +R ++SAT
Sbjct: 211 MDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSAT 265
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 64.1 bits (149), Expect = 5e-09
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L++APTRELA QI + ++G+ + +R +FGG PQ L+ GVEI++ATPGRLL
Sbjct: 85 LIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIAALQAGVEILVATPGRLL 143
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D +E++ N + LVLDEADRMLDMGF P I++++ + P RQ LM+SAT++
Sbjct: 143 LDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSPQRQSLMFSATFS 197
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 64.1 bits (149), Expect = 5e-09
Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD---RQVLMWSATW 416
ID +E+ L C YLVLDEADRMLDMGFEPQIRKI+ Q P R M+SAT+
Sbjct: 285 IDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATF 341
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK-GPQGRCLERGVEIVIATPG 249
P LVL+PTRELA QI + A +F +++ ++GG Q L G I+IATPG
Sbjct: 223 PCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPG 282
Query: 250 RLL 258
RL+
Sbjct: 283 RLI 285
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 64.1 bits (149), Expect = 5e-09
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P LVLAPTRELA QI + A +F VR ++GGAP G Q R ++RG ++++ATPGR
Sbjct: 238 PSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGR 297
Query: 253 L 255
L
Sbjct: 298 L 298
Score = 62.9 bits (146), Expect = 1e-08
Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQVLMWSATW 416
D LE+ +L YLVLDEADRMLDMGFEPQIR I+E+ +RQ LM+SAT+
Sbjct: 300 DLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATF 356
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 63.7 bits (148), Expect = 6e-09
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P L+LAPTRELAQQI + +S+ + T I GG P+ Q L RGV+++IATPGR
Sbjct: 449 PRALILAPTRELAQQIDRTIQPIARSVGLFTTTIVGGVPQYKQVAALTRGVDVIIATPGR 508
Query: 253 L 255
+
Sbjct: 509 V 509
Score = 40.3 bits (90), Expect = 0.065
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D +E+ +L + VLDEAD M D+GF +++I+ + Q L++SAT
Sbjct: 511 DLIEQGRLDLSQVKVTVLDEADHMCDLGFLEPVQRILRETSEGGQKLLFSAT 562
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 63.3 bits (147), Expect = 8e-09
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVL+PTRELA QI + ++G+ + + IFGG GPQ + L GV++V+ATPGRL+
Sbjct: 142 LVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALAAGVDVVVATPGRLM 200
Score = 49.6 bits (113), Expect = 1e-04
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D L +++ +L VLDEAD+MLD+GF IRKI Q+ +RQ L +SAT
Sbjct: 200 MDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQNLFFSAT 252
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 63.3 bits (147), Expect = 8e-09
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP I ++ P ++ ++L+PTRELA QI + FG+ + + T GGAP
Sbjct: 159 LPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRK 218
Query: 199 QGRCLERGVEIVIATPGRL 255
Q R L +GV+I++ATPGRL
Sbjct: 219 QMRDLSKGVDILVATPGRL 237
Score = 56.4 bits (130), Expect = 9e-07
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D ++++ L +LVLDEAD+MLD+GF P +++II ++ DRQ L++SAT
Sbjct: 239 DLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQTLLFSAT 290
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 63.3 bits (147), Expect = 8e-09
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 GPGHNILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSI-HVRNTCIF 177
G G A+ I N RD P VLVLAPTRELA Q+ + F +++ ++ CI+
Sbjct: 54 GTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIY 113
Query: 178 GGAPKGPQGRCLERGVEIVIATPGRLL 258
GG G Q R L++GV++V+ T GR++
Sbjct: 114 GGQEYGSQIRALKQGVKVVVGTTGRVM 140
Score = 44.4 bits (100), Expect = 0.004
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D +EK T L LVLDEAD ML MGF ++ ++ + + Q L++SAT
Sbjct: 140 MDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSDECQRLLFSAT 192
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 63.3 bits (147), Expect = 8e-09
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D L K+ NL C YLVLDEADRMLDMGFE +I+ I + RQ L++SAT
Sbjct: 335 DMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSAT 386
Score = 53.2 bits (122), Expect = 9e-06
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Frame = +1
Query: 16 ILPAIVHIINQPRLL---RDDGPIVLVLAPTRELAQQIQQVANEFGQSI------HVRNT 168
+LP ++ + Q L R +GP L++ P+RELA+QI + E ++ +R
Sbjct: 245 VLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAG 304
Query: 169 CIFGGAPKGPQGRCLERGVEIVIATPGRL 255
GG P G Q + + G+ IV+ATPGRL
Sbjct: 305 LCIGGVPIGEQAKDVRDGIHIVVATPGRL 333
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 63.3 bits (147), Expect = 8e-09
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +1
Query: 43 NQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERG 222
N+P R P+ LVLAPTRELA QI + A +F +R ++GG Q R L+RG
Sbjct: 341 NRPYQRRKQYPLGLVLAPTRELATQIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRG 400
Query: 223 VEIVIATPGRL 255
+++ATPGRL
Sbjct: 401 CHLIVATPGRL 411
Score = 57.6 bits (133), Expect = 4e-07
Identities = 32/57 (56%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE--QIRP--DRQVLMWSATW 416
D + + L +LVLDEADRMLDMGFEPQIR IIE + P RQ LM+SAT+
Sbjct: 413 DIINRGKIGLENLRFLVLDEADRMLDMGFEPQIRHIIENRDMPPTGQRQTLMFSATF 469
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 63.3 bits (147), Expect = 8e-09
Identities = 35/57 (61%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQVLMWSATW 416
D LE+ L YLVLDEADRMLDMGFEPQIRKI+EQ RQ LM+SAT+
Sbjct: 354 DMLERCKIGLDCIRYLVLDEADRMLDMGFEPQIRKIVEQTNMPPPGQRQTLMFSATF 410
Score = 52.4 bits (120), Expect = 2e-05
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+ L+LAPTRELA QI A +F VR ++GG Q + + +G +++ATPGR
Sbjct: 292 PVALILAPTRELAVQIYDEARKFSYRSLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGR 351
Query: 253 L 255
L
Sbjct: 352 L 352
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 63.3 bits (147), Expect = 8e-09
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLR--DDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP 189
++ + ++++P L+ + P L+LAPTRELA QI A +FG ++ +R I+GG
Sbjct: 64 LVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVD 123
Query: 190 KGPQGRCLERGVEIVIATPGRLLIFWRRRQ 279
Q L +G ++VIATPGRL+ + ++ +
Sbjct: 124 YDKQREMLRKGADVVIATPGRLIDYLKQHE 153
Score = 50.4 bits (115), Expect = 6e-05
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Frame = +3
Query: 255 IDFLEK-ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQVLMWSAT 413
ID+L++ E +LR C VLDEADRM D+GF IR I+ ++ R RQ L++SAT
Sbjct: 146 IDYLKQHEVVSLRVCEICVLDEADRMFDLGFIKDIRFILRRLPERCSRQTLLFSAT 201
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 63.3 bits (147), Expect = 8e-09
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +1
Query: 61 RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIA 240
R P+ LVLAPTRELA+Q+++ E S+ C++GG P G Q R L+ GV++ +
Sbjct: 175 RGRNPLCLVLAPTRELARQVEKEFRESAPSLDT--ICLYGGTPIGQQMRQLDYGVDVAVG 232
Query: 241 TPGRLLIFWRR 273
TPGR++ +R
Sbjct: 233 TPGRVIDLMKR 243
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID +++ NL ++VLDEAD+ML +GF + I+E++ RQ +M+SAT
Sbjct: 238 IDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSAT 290
>UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Janibacter sp. HTCC2649
Length = 514
Score = 62.9 bits (146), Expect = 1e-08
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P L+LAPTRELA QI + Q + + + +FGG +GPQ + RGV++V+A PGR
Sbjct: 92 PRALILAPTRELAIQIDEALAPLAQPLGITSKTVFGGVGQGPQVNAITRGVDVVVACPGR 151
Query: 253 L 255
L
Sbjct: 152 L 152
Score = 37.9 bits (84), Expect = 0.35
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +3
Query: 306 VLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+LDEAD M D+GF P +++I+++ + Q +++SAT
Sbjct: 170 ILDEADHMADLGFLPVVKRILDKTPRNGQRMLFSAT 205
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPA+ +++ PR R P VL+LAPTRELA QI +V + G + + GG
Sbjct: 56 VLPALQFLLDDPRPSRK--PRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASD 113
Query: 196 PQGRCLERGVEIVIATPGRLL 258
Q L+ ++I++ATPGRLL
Sbjct: 114 KQLEILQSKIDILVATPGRLL 134
Score = 46.8 bits (106), Expect = 7e-04
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
++ + KE +L L++DEADRMLDMG P + +IE I D Q +SAT A
Sbjct: 134 LNIMSKEFIDLSDIELLIIDEADRMLDMGQGPDVLALIEAIPGDFQAACFSATLA 188
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L+L PTRELA Q+ + + + +R+T ++GG PQ + L RGVE+VIATPGRLL
Sbjct: 100 LILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQTLRRGVELVIATPGRLL 158
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/55 (47%), Positives = 41/55 (74%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D +++++ NL + LVLDEADRMLDMGF P +++II + RQ L++SAT++
Sbjct: 158 LDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPKTRQNLLFSATFS 212
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP + + ++ R + VLVL PTRELA Q+ Q + + + + +FGG P
Sbjct: 57 LPILEKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYP 116
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q + L+ G++IV+ATPGRLL
Sbjct: 117 QIQALKSGIDIVVATPGRLL 136
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+D + +L LV DEADRM DMGF I++I++ + RQ L++SAT+
Sbjct: 136 LDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQNLLFSATY 189
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP + ++ + + VLVL PTRELA+Q+ Q +G+ + +R +GG P
Sbjct: 57 LPLLQRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINP 116
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q L +GV++++ATPGRLL
Sbjct: 117 QMMKLRKGVDVLVATPGRLL 136
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D + + LVLDEADRMLD+GF ++ + + RQ L++SAT++
Sbjct: 136 LDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQTLLFSATFS 190
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P VLVL PTRELA Q+ + + ++ + CIFGG PQ + + +GV++++A PGR
Sbjct: 80 PRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNPQVQAMAKGVDVLVACPGR 139
Query: 253 LL 258
LL
Sbjct: 140 LL 141
Score = 51.6 bits (118), Expect = 3e-05
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D + + +L R LVLDEADRMLDMGF ++K++ ++ RQ L++SAT++
Sbjct: 141 LDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARLPAKRQNLLFSATFS 195
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLI 261
LVL+PTRELA QI Q A ++ + +H + GG Q R L+R +IV+ATPGRLL
Sbjct: 76 LVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKRNWDIVVATPGRLLD 135
Query: 262 FWRRRQRTCAD 294
RR T A+
Sbjct: 136 HVRRNNLTLAN 146
Score = 52.4 bits (120), Expect = 2e-05
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + + L + +++DEADRMLDMGF P I I+ Q+ RQ L++SAT
Sbjct: 134 LDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQSLLFSAT 186
>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
triquetra (Dinoflagellate)
Length = 324
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +3
Query: 261 FLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPP 428
F E LR +YLV+DEAD+ML GFEPQI++++ P+RQV ++SATW PP
Sbjct: 243 FAEASVVYLREVSYLVIDEADQMLTDGFEPQIQEVLALTHPNRQVSLFSATW--PP 296
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGG---- 183
+LP + H+ Q P +LVLAPTREL QI A +F +R FGG
Sbjct: 161 LLPGMAHVAAQV----GTEPRMLVLAPTRELVMQIATEAEQFALGFRLRLGLAFGGQDGE 216
Query: 184 APKGPQGRCLERGVEIVIATPGRLLIF 264
+ Q R L RGV++++ TPGRL F
Sbjct: 217 GDQMMQSRVLRRGVDVLVGTPGRLTKF 243
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 62.1 bits (144), Expect = 2e-08
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 ILPAIVHIINQ-PRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQS-IHVRNTCIFGGAP 189
+LP + + Q P + GP+ L+LAPTRELA QI + +F ++ +R+ C GG+
Sbjct: 311 LLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSE 370
Query: 190 KGPQGRCLERGVEIVIATPGRLL 258
Q L+RG EIV+ATPGR +
Sbjct: 371 MKKQITDLKRGTEIVVATPGRFI 393
Score = 60.5 bits (140), Expect = 6e-08
Identities = 23/43 (53%), Positives = 38/43 (88%)
Frame = +3
Query: 288 RRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+R T++V+DEADR+ D+GFEPQI +I++ +RPD+Q +++SAT+
Sbjct: 407 KRITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATF 449
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDD-GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
+LP I H+ Q +L + GPI ++ APTRELA QI + + + + + C GG+
Sbjct: 307 LLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKLISDLDISSICCTGGSDL 366
Query: 193 GPQGRCLERGVEIVIATPGRLL 258
Q L+ GVEI IATPGR +
Sbjct: 367 KKQIDKLKTGVEIAIATPGRFI 388
Score = 58.0 bits (134), Expect = 3e-07
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +3
Query: 255 IDFLEKETTNL---RRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
ID L NL R +++V+DEADR+ D GFEPQI ++ +RPDRQ +++SAT+
Sbjct: 388 IDLLSLNGGNLVSTLRISFVVMDEADRLFDFGFEPQIASVLRTVRPDRQCVLFSATF 444
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L++ PTRELA QI + +G+ + +T IFGG + PQ L++G++I+IATPGRLL
Sbjct: 159 LIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLL 217
Score = 52.4 bits (120), Expect = 2e-05
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + + +LR + VLDEADRMLDMGF IRKI+ ++ +Q L +SAT
Sbjct: 217 LDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQSLFFSAT 269
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLI 261
LVLAPTRELA Q+ E+G+ + +R ++GG P Q + L+RG +I++ATPGRLL
Sbjct: 80 LVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLLD 139
Query: 262 FWRRR 276
R++
Sbjct: 140 LLRQK 144
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D L ++ +L + YLVLDEADRMLD+GF I+KI++ DRQ L+++AT
Sbjct: 138 LDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLLFTAT 190
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D L+K L C YLVLDEADRM+DMGFE +R I + RQ L++SAT
Sbjct: 191 MDLLDKRIITLDVCRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSAT 243
Score = 54.0 bits (124), Expect = 5e-06
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Frame = +1
Query: 19 LPAIVHIINQPRLL---RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVR-------NT 168
LP I+ + Q + + R++GP +++ P+RELA+Q +V F +++ N
Sbjct: 103 LPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVITHFSRALEAHGFPSLRTNL 162
Query: 169 CIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
CI GG+ Q ++RGV +V+ATPGRL+
Sbjct: 163 CI-GGSSIKEQSDAMKRGVHMVVATPGRLM 191
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D L K+ NL C YL LDEADR++D+GFE IR++ + + RQ L++SAT
Sbjct: 327 DLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSAT 378
Score = 44.4 bits (100), Expect = 0.004
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLR---DDGPIVLVLAPTRELAQQIQQVANEFGQSI------HVRNT 168
+LP I+ + + ++ +GP +++ P+RELA+Q V +F + +R
Sbjct: 237 VLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPL 296
Query: 169 CIFGGAPKGPQGRCLERGVEIVIATPGRL 255
GG Q +++GV IV+ATPGRL
Sbjct: 297 LCIGGVDMRAQLDVVKKGVHIVVATPGRL 325
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQVLMWSATW 416
D + + L +LVLDEADRMLDMGFEPQIR+I+EQ+ RQ LM+SAT+
Sbjct: 441 DMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATF 497
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/65 (46%), Positives = 40/65 (61%)
Frame = +1
Query: 61 RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIA 240
R P+ LVLAPTRELA QI + A +F +R ++GG Q R L+RG +++A
Sbjct: 375 RKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVA 434
Query: 241 TPGRL 255
TPGRL
Sbjct: 435 TPGRL 439
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIH-VRNTCIFGGAPKGPQGRCLERGVEIVIATPG 249
P +L+LAPTRELA Q+ + + V ++GGAP GPQ + L +G +I++ATPG
Sbjct: 92 PQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQILVATPG 151
Query: 250 RLLIFWRRRQR 282
RL RR ++
Sbjct: 152 RLCDHLRRDEQ 162
Score = 40.3 bits (90), Expect = 0.065
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D L ++ L +LVLDEAD ML +GF + I + RQ +++SAT
Sbjct: 155 DHLRRDEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTVLFSAT 206
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSI--HVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 255
LVL PTRELA Q+ Q + + ++ +R+ I+GGA PQ + L +G +IV+ATPGRL
Sbjct: 77 LVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQSLSKGCDIVVATPGRL 136
Query: 256 LIFWRR 273
L R+
Sbjct: 137 LDLMRK 142
Score = 50.8 bits (116), Expect = 5e-05
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+D + K +LR LVLDEADRMLD+GF ++ I++Q + Q L++SAT+
Sbjct: 137 LDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNVQTLLFSATF 190
>UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP-dependent RNA
helicase - Lentisphaera araneosa HTCC2155
Length = 542
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +1
Query: 34 HIINQPRL-LRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRC 210
H +N P+ ++ P L+LAPTRELA QI A G+ +R FGG Q +
Sbjct: 176 HFVNNPQTEVKAGTPRALILAPTRELALQIGADAEGLGKYCDIRVETFFGGMDFDKQAQI 235
Query: 211 LERGVEIVIATPGRLLIFWRRRQRTCADALIWC 309
L V+I +ATPGRL+ + RR+ + C
Sbjct: 236 LRGRVDIAVATPGRLMDYHRRKMINLREVEFLC 268
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQVLMWSAT 413
+D+ ++ NLR +L +DEADRMLDMGF P +RKI+ + R R ++SAT
Sbjct: 251 MDYHRRKMINLREVEFLCIDEADRMLDMGFIPDVRKIVGYLPGRDKRITQLYSAT 305
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 61.3 bits (142), Expect = 3e-08
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+ LV+APTRELA QIQ+ A +F Q+ ++ I+GG R +++ +++ TPGR
Sbjct: 432 PLALVIAPTRELAVQIQKEARKFAQNTSIKPVVIYGGVQVAYHLRQVQQDCHLLVGTPGR 491
Query: 253 LLIFWRRRQRTCADALIWCWMRLIECWTWAXXXXXXXXXXXXXXIDKY*CGQLH--XXXX 426
L F +R+ + A+ ++ L E D H
Sbjct: 492 LKDFLGKRKISLANLK---YLILDEADRMLDMGFLPEIKAIINDFDMPPKEDRHTLMFSA 548
Query: 427 XXXXEVQNLAEEFLHDYIQXNIGSL 501
E+QNLA EFL++Y+ IG +
Sbjct: 549 TFPTEIQNLAAEFLNNYVYLTIGKV 573
Score = 57.6 bits (133), Expect = 4e-07
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQVLMWSATW 416
DFL K +L YL+LDEADRMLDMGF P+I+ II + DR LM+SAT+
Sbjct: 494 DFLGKRKISLANLKYLILDEADRMLDMGFLPEIKAIINDFDMPPKEDRHTLMFSATF 550
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQVLMWSAT 413
IDF K N C LV+DEADRMLDMGF P +R+I+ + + DRQ LM+SAT
Sbjct: 231 IDFHNKRLVNFDNCQTLVIDEADRMLDMGFIPDVRRIVSWMPKKRDRQTLMFSAT 285
Score = 58.0 bits (134), Expect = 3e-07
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERG-VEIVIATPG 249
P L+LAPTREL QI + A + G+ V ++GGA Q L+RG +IV+ATPG
Sbjct: 169 PRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELLKRGKTDIVVATPG 228
Query: 250 RLLIFWRRR 276
RL+ F +R
Sbjct: 229 RLIDFHNKR 237
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 60.9 bits (141), Expect = 4e-08
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L+L PTRELA Q+ + + + +R+ +FGG PQ L RGVEI+IATPGRLL
Sbjct: 91 LILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLL 149
Score = 60.1 bits (139), Expect = 7e-08
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D ++++T NL + LVLDEADRMLDMGF P +++I+ + +RQ L++SAT++
Sbjct: 149 LDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFS 203
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+ LVL PTRELAQQ+ + +S+ +R + GG G Q L G E+V+ATPGR
Sbjct: 141 PLGLVLVPTRELAQQVTDALTPYARSVKLRLATVVGGMSIGRQASALRGGAEVVVATPGR 200
Query: 253 L 255
L
Sbjct: 201 L 201
Score = 54.4 bits (125), Expect = 4e-06
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D +++ L + + VLDEAD+M DMGF PQ+ +++Q+RP+ Q +++SAT
Sbjct: 203 DLIDRGDCRLNQVSVTVLDEADQMADMGFMPQVTALLDQVRPEGQRMLFSAT 254
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 60.9 bits (141), Expect = 4e-08
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQS-IHVRNTCIFGGAPKGPQGRCLERGVEIVIATPG 249
P +V+APTRELA+Q VA EF +S + ++GGA GPQ L RGV++V+ TPG
Sbjct: 77 PRAIVIAPTRELAKQ---VAEEFSKSGPQLSTVTVYGGAAYGPQENALRRGVDVVVGTPG 133
Query: 250 RLL 258
RL+
Sbjct: 134 RLI 136
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID LE+ +L Y VLDEAD ML +GF I I++Q RQ +++SAT
Sbjct: 136 IDHLERGNLDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTMLFSAT 188
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 60.9 bits (141), Expect = 4e-08
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 22 PAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQ 201
PA+ HI+++ P VL+LAP+RELA+QI V + + +++ I GG P G Q
Sbjct: 74 PAVQHILDRDEQ-STTAPKVLILAPSRELARQIFNVVEQLTKHTRIQSHLIIGGTPYGMQ 132
Query: 202 GRCLERGVEIVIATPGRLL 258
+ L +I++ATPGRL+
Sbjct: 133 QQQLSEPCDILVATPGRLV 151
Score = 50.4 bits (115), Expect = 6e-05
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
++ EK+ +L +Y V+DEADRMLDMGF I I +++ + Q LM+SAT
Sbjct: 151 VELDEKQWLDLTDVSYFVIDEADRMLDMGFVSAINCIAKELPKEHQTLMFSAT 203
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 60.9 bits (141), Expect = 4e-08
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDG-PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
+L ++N P R G P LVLAPTRELA QIQ+ A + + +FGG
Sbjct: 180 LLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQKDAEVLEIFTGLTSVVVFGGMDH 239
Query: 193 GPQGRCLERGVEIVIATPGRLLIFWR 270
Q R LE+ V++VI TPGR++ + R
Sbjct: 240 EKQRRSLEQPVDLVIGTPGRIIDYSR 265
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQVLMWSAT 413
ID+ + L + LV+DEADRMLDMGF P +++I+ Q+ + +RQ L++SAT
Sbjct: 261 IDYSRGGSLKLSKVEVLVIDEADRMLDMGFIPDVKRIVSQLPRKGERQTLLFSAT 315
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + + R + P LVLAPTREL QI++ ++ + +FGG +
Sbjct: 63 LLPLVARLTASGRPAQARKPRALVLAPTRELVNQIEEALKPLARTAGLTTQTVFGGVGQN 122
Query: 196 PQGRCLERGVEIVIATPGRL 255
PQ + L RG +IV+A PGRL
Sbjct: 123 PQVQGLRRGADIVLACPGRL 142
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D + + +L + VLDEAD M D+GF P +R+I+++ D Q L++SAT
Sbjct: 144 DLIGQGHCDLSQVEITVLDEADHMADLGFLPGVRRIMDRTPRDGQRLLFSAT 195
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 60.9 bits (141), Expect = 4e-08
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQVLMWSATW 416
+D +E+ L C YLVLDEADRMLDMGFEPQIR+++E R +R M+SAT+
Sbjct: 306 LDVMEQGLIGLEGCRYLVLDEADRMLDMGFEPQIRQVVEFNRMPPKEERVTAMFSATF 363
>UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Helicase conserved C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 602
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +3
Query: 252 TIDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
T D ++K+ N+ C Y+VLDEADR+LDM FE +IR II+ + RQ L++S+T
Sbjct: 295 TSDMVDKQKFNMNLCRYIVLDEADRLLDMIFEKEIRNIIDHVPGARQTLLFSST 348
Score = 33.5 bits (73), Expect = 7.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAP-TRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
++ AI H +N P L R +GP+ +++ P T ELA Q E G +R + GG
Sbjct: 195 LVMAIEHEMNMP-LFRGEGPLAIIIVPSTYELACYYSQKLQEAGYP-QIRCSLSIGGMDM 252
Query: 193 GPQGRCLERGVEIV 234
Q + GV ++
Sbjct: 253 MQQIAQVREGVHLI 266
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRD---DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
+LP + ++ P L + DGP L++AP+RELA QI N+F R + GG
Sbjct: 636 VLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETNKFASYCSCRTVAVVGGR 695
Query: 187 PKGPQGRCLERGVEIVIATPGRL 255
Q L +GVEI+I TPGR+
Sbjct: 696 NAEAQAFELRKGVEIIIGTPGRI 718
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
D LEK T L +C Y++LDEADRM+DMGFE + I+++I
Sbjct: 720 DCLEKAYTVLNQCNYVILDEADRMMDMGFEDSVHFILDKI 759
>UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7;
n=9; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 671
Score = 60.9 bits (141), Expect = 4e-08
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +1
Query: 16 ILPAIVHIINQP-RLLRDDG----PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFG 180
+LP + ++N P + R G P VLVL PTRELA+Q+ + +G S+ + + C++G
Sbjct: 151 VLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYG 210
Query: 181 GAPKGPQGRCLERGVEIVIATPGRL 255
G Q L+RGV+IV+ TPGR+
Sbjct: 211 GDSYPVQEGKLKRGVDIVVGTPGRI 235
Score = 36.7 bits (81), Expect = 0.80
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR--QVLMWSAT 413
D +E++ + + VLDEAD ML MGF + I+ ++ Q L++SAT
Sbjct: 237 DHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSAT 290
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDD-GPIVLVLAPTRELAQQIQQVANEFGQSI-HVRNTCIFGGAP 189
ILP + I Q L D+ GP+ L+L+PTRELA QI + +F +R+ C GG+
Sbjct: 292 ILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIHEEVTKFTSGDPSIRSLCCTGGSE 351
Query: 190 KGPQGRCLERGVEIVIATPGRLL 258
Q ++RGVEIVIATPGR +
Sbjct: 352 LKRQINDIKRGVEIVIATPGRFI 374
Score = 60.5 bits (140), Expect = 6e-08
Identities = 27/57 (47%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Frame = +3
Query: 255 IDFLEKETTNL---RRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
ID L + NL +R ++V+DEADR+ D+GFEPQ+ +I++ IRPD+Q +++SAT+
Sbjct: 374 IDLLSLNSGNLINPKRIVFVVMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLFSATF 430
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 60.9 bits (141), Expect = 4e-08
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRL---LRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
++P I +I P+L + +GP L+LAPTRELA QI+ A +F + + + GG
Sbjct: 218 LIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGY 277
Query: 187 PKGPQGRCLERGVEIVIATPGRLLIFWRRR 276
Q ++ G E+++ATPGRLL RR
Sbjct: 278 SAQEQALAVQEGAELIVATPGRLLDVIDRR 307
Score = 50.0 bits (114), Expect = 8e-05
Identities = 18/41 (43%), Positives = 31/41 (75%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
+D +++ L +C Y+V+DEADRM+DMGFE Q++K++ +
Sbjct: 301 LDVIDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLASL 341
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 60.9 bits (141), Expect = 4e-08
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCL-ERGVEIVIATPGRL 255
+LVLAPTRELAQQ + + FG+ + +++ CIFGG K Q R L ++ +V+ TPGR
Sbjct: 257 MLVLAPTRELAQQSHEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRT 316
Query: 256 L 258
L
Sbjct: 317 L 317
Score = 56.4 bits (130), Expect = 9e-07
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Frame = +3
Query: 252 TIDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI---RPDRQVLMWSATW 416
T+D + +L +YLVLDEADRMLD GFE IR+II + RQ +M+SATW
Sbjct: 316 TLDLADSGELDLSSVSYLVLDEADRMLDAGFENDIRRIIAHTPGHKEGRQTVMFSATW 373
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 60.5 bits (140), Expect = 6e-08
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLI 261
LVL PTRELA Q+ + + +GQ + + ++GG Q R L+RGV++V+ATPGR L
Sbjct: 111 LVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGRALD 170
Query: 262 FWRRR 276
+R+
Sbjct: 171 HLQRK 175
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/71 (38%), Positives = 37/71 (52%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
+D L+++T L + +VLDEAD MLDMGF + I+ RQ ++SAT PP
Sbjct: 169 LDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAILSSTPEKRQTALFSAT--LPPRI 226
Query: 435 XGSXESS*RVP 467
E R P
Sbjct: 227 ASIAERHLREP 237
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 60.5 bits (140), Expect = 6e-08
Identities = 34/69 (49%), Positives = 38/69 (55%)
Frame = +1
Query: 52 RLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEI 231
RL G LVLAPTRELA QI + FG + VR I GG Q L + EI
Sbjct: 65 RLAGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKREI 124
Query: 232 VIATPGRLL 258
VIATPGRL+
Sbjct: 125 VIATPGRLV 133
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D LE+ L LVLDEADRMLDMGF+PQ+ +I+ ++ RQ L++SAT A
Sbjct: 133 VDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFSATMA 187
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 60.5 bits (140), Expect = 6e-08
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLI 261
LVL PTRELA Q+++ ++ + + T ++GG G Q L+RGV++V ATPGRLL
Sbjct: 205 LVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDVVAATPGRLLD 264
Query: 262 FWRRRQRTCADALI 303
+ T AD I
Sbjct: 265 HIEQGTMTLADVEI 278
Score = 55.6 bits (128), Expect = 2e-06
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D +E+ T L LVLDE DRMLDMGF P +++I++Q RQ L +SAT
Sbjct: 263 LDHIEQGTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQARQTLFFSAT 315
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 60.5 bits (140), Expect = 6e-08
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIV--LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPK 192
LP + + QP +D P++ LV+ PTRELA Q+ ++ Q + ++ ++GGA
Sbjct: 78 LPVLEQLSKQP----NDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANM 133
Query: 193 GPQGRCLERGVEIVIATPGRL 255
PQ + +E+GV+I++ATPGRL
Sbjct: 134 NPQRKGVEQGVDILVATPGRL 154
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
D + + +L T LV+DEADRMLD+GF I K+ I + Q +++SAT++
Sbjct: 156 DIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIATEHQTMLFSATYS 209
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 60.5 bits (140), Expect = 6e-08
Identities = 28/87 (32%), Positives = 52/87 (59%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + + P++ R ++L PTRELA Q+++ N++ + + + ++GG
Sbjct: 56 VLPLLHRFADAPKI-RPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAA 114
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRR 276
PQ + L GV++++ATPGRLL + +R
Sbjct: 115 PQKKRLIEGVDLLVATPGRLLDMYTQR 141
Score = 49.6 bits (113), Expect = 1e-04
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + + LVLDEADRMLDMGF I IIE++ RQ L++SAT
Sbjct: 135 LDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQNLLFSAT 187
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 60.5 bits (140), Expect = 6e-08
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIR----PDRQVLMWSATW 416
D + + L +LVLDEADRMLDMGFEPQIR+I+E+ R +RQ LM+SAT+
Sbjct: 446 DMIGRGKVGLDNIRFLVLDEADRMLDMGFEPQIRRIVEESRMPVTGERQTLMFSATF 502
Score = 35.1 bits (77), Expect = 2.4
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 94 PTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 255
P + I + + +F +R ++GG Q R LERG +++ATPGRL
Sbjct: 391 PGADPEPDIFEESKKFCYRSRMRPAVLYGGNNTQDQMRDLERGCHLIVATPGRL 444
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 60.5 bits (140), Expect = 6e-08
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +1
Query: 52 RLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEI 231
++ + +G LVL PTRELA+Q+Q EF + +R I+GG PQ R LER ++
Sbjct: 63 KIEKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLER-ADV 121
Query: 232 VIATPGRLL 258
V+ATPGRLL
Sbjct: 122 VVATPGRLL 130
Score = 56.8 bits (131), Expect = 7e-07
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D +E+ T +L LVLDEADRMLDMGF + +II++ DRQ +M+SAT
Sbjct: 130 LDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMMFSAT 182
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 60.5 bits (140), Expect = 6e-08
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L++APTRELA QI + +F + VR I+GG G Q L+RG EI++ATPGRL+
Sbjct: 73 LIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEILVATPGRLI 131
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/54 (46%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVL-MWSAT 413
ID +++ + ++ R T+LVLDEAD MLDMGF I+ I++ + PD +V+ ++SAT
Sbjct: 131 IDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILD-LTPDEKVMSLFSAT 183
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 60.5 bits (140), Expect = 6e-08
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVLAPTRELA QI++ + G S+ +R+ CI GG Q R L R ++IATPGRL+
Sbjct: 170 LVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLI 228
Score = 38.3 bits (85), Expect = 0.26
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 IDFLEK-ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQV-LMWSAT 413
ID LE + +L++ YLV+DE DRM+D+ + I +I++QI +++ +++AT
Sbjct: 228 IDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIPSHQRITYLYTAT 282
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 60.5 bits (140), Expect = 6e-08
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKII-EQIRPDRQVLMWSATWAXPPG 431
+D L++ + +L + YLVLDEADRML+ GFE I+ II E RQ LM++ATW
Sbjct: 243 LDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVR 302
Query: 432 XXGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
S + + + AN I QIV+V + K KL+ LL
Sbjct: 303 ELASTFMNNPIKVSIGNTDQ----LTANKRITQIVEVVDPRGKERKLLELL 349
Score = 57.2 bits (132), Expect = 5e-07
Identities = 32/80 (40%), Positives = 48/80 (60%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
+PAI H++N + G VLV++PTRELA QI + ++ C++GG PK
Sbjct: 168 VPAISHLMNDQK---KRGIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDE 224
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q L++ ++V+ATPGRLL
Sbjct: 225 QRIQLKKS-QVVVATPGRLL 243
>UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 558
Score = 60.1 bits (139), Expect = 7e-08
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 ILPAIVHIINQ-PRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQS-IHVRNTCIFGGAP 189
+LP I I+N+ P+L R DG L+L PTREL QQ+ V S I + + + GG
Sbjct: 63 LLPTITMILNKHPKLKRTDGLFCLILTPTRELTQQVYDVLTILTTSIIGLVPSIVVGGDS 122
Query: 190 KGPQGRCLERGVEIVIATPGRLL 258
K + + +GV I++ TPGRLL
Sbjct: 123 KKSEKARIRKGVNILVGTPGRLL 145
Score = 42.7 bits (96), Expect = 0.012
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +3
Query: 276 TTNLR--RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
T NL+ + +L++DEADR+LD GFE + +II + +R ++ SAT
Sbjct: 151 TNNLKLDKVEFLIMDEADRVLDAGFEKDVIEIINHVNKNRTSILVSAT 198
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 60.1 bits (139), Expect = 7e-08
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVL PTRELA Q++ A + + + +R+ +FGG PQ + L+ GV+I++ATPGRLL
Sbjct: 100 LVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLL 158
Score = 55.6 bits (128), Expect = 2e-06
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXP 425
+D + ++ LVLDEADRMLDMGF I+K+IE + +RQ +M+SAT++ P
Sbjct: 158 LDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNRQNMMFSATFSTP 214
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 60.1 bits (139), Expect = 7e-08
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIH-VRNTCIFGGAPKGPQGRCLERGVEIVIATPG 249
P LVL PTRELAQQ+ + +G+ + +R IFGGA Q + L G IV+ATPG
Sbjct: 78 PQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTHIVVATPG 137
Query: 250 RLLIFWRRR 276
RLL RR
Sbjct: 138 RLLDHIERR 146
Score = 41.9 bits (94), Expect = 0.021
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D +E+ + +L +VLDEAD ML MGF + I+ + +R+V ++SAT
Sbjct: 140 LDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVALFSAT 192
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 60.1 bits (139), Expect = 7e-08
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNT-CIFGGAPKGPQGRCLERGVEIVIATPG 249
P +VLAPTRELA+Q++ NE + +T C++GG P G Q L RGV+IV+ TPG
Sbjct: 102 PKCIVLAPTRELAKQVE---NEIFITAPTLDTACVYGGTPIGQQESKLRRGVDIVVGTPG 158
Query: 250 RLLIFWRRR 276
R++ RR
Sbjct: 159 RIMDLMNRR 167
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + + +L ++VLDEAD+ML++GFE + I+ RQ ++SAT
Sbjct: 161 MDLMNRRALDLSEIEFVVLDEADQMLNVGFEEDVEAILHDCPAGRQTFLFSAT 213
>UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|Rep:
DEAD-box RNA helicase - Athelges takanoshimensis
Length = 124
Score = 60.1 bits (139), Expect = 7e-08
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVL P+RELA QI + E+ + +++T +FGG Q + L +GV+I++ATPGRLL
Sbjct: 36 LVLTPSRELAAQILENVKEYSTHLDIKSTVVFGGVKASGQIKTLRQGVDILVATPGRLL 94
Score = 33.5 bits (73), Expect = 7.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMG 341
+D ++ + R L+LDEADRMLDMG
Sbjct: 94 LDLHSQKAVSFNRIDVLILDEADRMLDMG 122
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 60.1 bits (139), Expect = 7e-08
Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIR---PDRQVLMWSATWAXP 425
+D + +L TYLVLDEADRMLD GFEP IR II + R M+SATW P
Sbjct: 303 LDMARDGSLDLSGVTYLVLDEADRMLDKGFEPDIRAIIGMCKSREEGRHTSMFSATW--P 360
Query: 426 PGXXGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDV-CEEWEKNXKLITLLTXISSE 602
P G ES P + S AN + Q V+V + + K +L L ++++
Sbjct: 361 PAVRGLAESFMNGPVRVTVGSDELS---ANRRVEQTVEVLADGYAKERRLNDFLRSVNAQ 417
Score = 56.4 bits (130), Expect = 9e-07
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPI--------VLVLAPTRELAQQIQQVANEFGQSIHVRNTCI 174
LPA+ H++ + ++L D G VLV+APTRELA Q ++ + G+S+ + C+
Sbjct: 215 LPALQHLVTKHKVL-DSGKKKAKGAQVNVLVIAPTRELAIQTEENMAKLGKSMGIGMICL 273
Query: 175 FGGAPKGPQGRCLERG--VEIVIATPGRLL 258
+GG K Q R L + V IV+ TPGR+L
Sbjct: 274 YGGVSKQEQVRLLNQSPPVRIVVGTPGRVL 303
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 59.7 bits (138), Expect = 1e-07
Identities = 26/70 (37%), Positives = 45/70 (64%)
Frame = +1
Query: 70 GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPG 249
GP VL+++PTRELA QI ++ + + + + I GG G Q R + ++I++ATPG
Sbjct: 72 GPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNRMFSKPIDILVATPG 131
Query: 250 RLLIFWRRRQ 279
RLL +++++
Sbjct: 132 RLLDLYQQKK 141
Score = 56.8 bits (131), Expect = 7e-07
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXP 425
+D +++ N + ++LDEADRMLDMGF P IRKI +Q+LM+SAT+ P
Sbjct: 134 LDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKKQQMLMFSATFDPP 190
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 59.7 bits (138), Expect = 1e-07
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P L+L PTRELA Q+ + ++G+ + + + GG P Q LE+GV+++IATPGR
Sbjct: 73 PRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEKGVDVLIATPGR 132
Query: 253 LLIFWRR 273
LL + R
Sbjct: 133 LLDLFER 139
Score = 54.0 bits (124), Expect = 5e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D E+ L C LV+DEADRMLDMGF P I I ++ RQ L++SAT
Sbjct: 134 LDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTLLFSAT 186
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 59.7 bits (138), Expect = 1e-07
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXP 425
+D +E+ +LR +L+LDEADRMLDMGF + KI+ + DRQ +M+SAT P
Sbjct: 139 LDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQSMMFSATMPKP 195
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLI 261
L+L+PTRELA QI + + + + + +FGG PQ + L RGV+I++ATPGRLL
Sbjct: 81 LILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVATPGRLLD 140
Query: 262 FWRRR 276
+R
Sbjct: 141 LMEQR 145
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 59.7 bits (138), Expect = 1e-07
Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPI-VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
LP I +++ PR G + LV+APTRELA QI GQ +R I+GG
Sbjct: 57 LPIIQKMLSTPR-----GRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMD 111
Query: 196 PQGRCLERGVEIVIATPGRLL-IFWRRRQRTC 288
Q R L GV++V+A PGRLL WR C
Sbjct: 112 QQIRRLRSGVDVVVACPGRLLDHIWRGTIDVC 143
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + + T ++ L++DEADRM DMGF+P I+ I++ + Q L++SAT
Sbjct: 132 LDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLFSAT 184
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 59.7 bits (138), Expect = 1e-07
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 70 GPIVLVLAPTRELAQQIQQVANEFGQ-SIHVRNTCIFGGAPKGPQGRCLERGVEIVIATP 246
GP++LV+ PTRELAQQI +VA + + HV T + GG PQ L+ G +I++ATP
Sbjct: 138 GPVMLVITPTRELAQQIDEVAGKIADVTGHVAVT-VVGGVSYKPQTAALKYGCDILVATP 196
Query: 247 GRLL 258
GRL+
Sbjct: 197 GRLV 200
Score = 58.0 bits (134), Expect = 3e-07
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D +E+ +L LVLDEADRMLDMGF P +R+I+ + +RQ L++SAT
Sbjct: 200 VDLIEQGACHLDEVKVLVLDEADRMLDMGFLPAVRRIVRETPAERQTLLFSAT 252
>UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 777
Score = 59.7 bits (138), Expect = 1e-07
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 303 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
L+LDEADRML +GF Q++KI EQIRPDRQ LM+SAT+
Sbjct: 468 LILDEADRMLQLGFGDQLQKISEQIRPDRQTLMFSATF 505
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 70 GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCL-ERGVEIVIATP 246
GP+VL++ PTRELA+Q++ ++ + I+GG Q L + EI+IATP
Sbjct: 386 GPMVLIIVPTRELAKQVESSCKPLRSKFNIHSIAIYGGVDANEQKDILGQEHNEIIIATP 445
Query: 247 GRLL 258
GRL+
Sbjct: 446 GRLV 449
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 59.7 bits (138), Expect = 1e-07
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRD---DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
+LP + +I P + + +GP LV+ PTRELA QI++ +F + + + I G
Sbjct: 265 VLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWE 324
Query: 187 PKGPQGRCLERGVEIVIATPGRLLIFWRRR 276
Q L +G EIVIATPGRLL RR
Sbjct: 325 SIEKQALKLSQGCEIVIATPGRLLDCLERR 354
Score = 52.8 bits (121), Expect = 1e-05
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE 371
+D LE+ L +C YLVLDEADRM+DM FEPQ+ ++++
Sbjct: 348 LDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLD 386
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 59.7 bits (138), Expect = 1e-07
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDD---GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
++P + +I + P L D+ GP L++APTRELAQQI+ F + + I GG
Sbjct: 370 VIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGR 429
Query: 187 PKGPQGRCLERGVEIVIATPGRL 255
Q L G EI+IATPGRL
Sbjct: 430 SVEEQQFALRDGAEIIIATPGRL 452
Score = 43.2 bits (97), Expect = 0.009
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ-----IRPDRQVLM 401
D ++K + +C Y+V+DEADRM+D+GFE + I++ ++PD V +
Sbjct: 454 DMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVAL 506
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP + II R L+LAPTRELA QI+Q +S H+ + GG K
Sbjct: 143 LPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLS 202
Query: 199 QGRCLERGVEIVIATPGRL 255
Q + + G++++IATPGRL
Sbjct: 203 QIKRIAPGIDVLIATPGRL 221
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D + +L + +LVLDEADRMLDMGF +++I + +RQ ++SAT
Sbjct: 223 DLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQTALFSAT 274
>UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 549
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +1
Query: 79 VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
VL+L PTRELA+Q+Q N+ +R I+GG Q L+ GVE ++ATPGRL+
Sbjct: 95 VLILVPTRELAEQVQDNINKLSVDSGLRGFAIYGGTGYDKQKEALKNGVEFIVATPGRLI 154
Query: 259 IFWR 270
++
Sbjct: 155 DLYK 158
Score = 50.4 bits (115), Expect = 6e-05
Identities = 21/53 (39%), Positives = 38/53 (71%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID ++ +L++ +V DEADRM DMGF+ ++ I++++ +RQ+L++SAT
Sbjct: 154 IDLYKEHLVDLKQVRAIVFDEADRMFDMGFKDDMKYILQRVPRERQLLVFSAT 206
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLI 261
LVL PTRELAQQ+ ++ V + ++GG G Q R L G I++ATPGRLL
Sbjct: 87 LVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGVSIGEQIRQLANGTHILVATPGRLLD 146
Query: 262 FWRRR 276
R+R
Sbjct: 147 LLRKR 151
Score = 57.2 bits (132), Expect = 5e-07
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D L K +L + T+LV DEADRMLDMGF+ +I ++++++ RQ L++SAT
Sbjct: 145 LDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEVLKRLPSTRQTLLFSAT 197
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +1
Query: 67 DGPIVLVLAPTRELAQQIQQVANEFGQSIH-VRNTCIFGGAPKGPQGRCLERGVEIVIAT 243
D LVLAPTRELA QIQ + + VR+ C++GGAP Q L++ +IV+AT
Sbjct: 79 DAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITTLKKHPQIVVAT 138
Query: 244 PGRLLIFWRRR 276
PGRL+ +RR
Sbjct: 139 PGRLMDHMKRR 149
Score = 49.6 bits (113), Expect = 1e-04
Identities = 22/53 (41%), Positives = 37/53 (69%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D +++ T L + +VLDEADRMLDMGF + +I++QI+ + + ++SAT
Sbjct: 143 MDHMKRRTVKLDKVETVVLDEADRMLDMGFIHDVTRILDQIKSRKNLGLFSAT 195
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P L+L PTRELA Q+ + F + + ++GGAP Q R L++GV++V+ATPGR
Sbjct: 72 PQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVDLVVATPGR 131
Query: 253 LLIF 264
+ F
Sbjct: 132 CIHF 135
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
I F+E L YLVLDEAD ML+MGF + K+++ DR VLM+SAT
Sbjct: 133 IHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLMFSAT 185
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LV+ PTRELA QI + + + ++R+T +FGG PQ L +GV+I++ATPGRL+
Sbjct: 79 LVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEILAKGVDILVATPGRLI 137
Score = 41.1 bits (92), Expect = 0.037
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID + +L + VLDEAD MLDMGF I+KI + +Q L++SAT
Sbjct: 137 IDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRKKQTLLFSAT 189
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L+LAPTREL QI + F + H++ I GG GPQ + ERG ++++ATPGRL+
Sbjct: 148 LILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAERGADLIVATPGRLI 206
Score = 52.4 bits (120), Expect = 2e-05
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID L+++ L +LVLDEAD+MLD+GF +RKI + +RQ +++SAT
Sbjct: 206 IDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQTMLFSAT 258
>UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Arthrobacter sp. (strain FB24)
Length = 635
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+ LVLAPTRELA QI +++ + T I+GG + Q + L GV+IVIA PGR
Sbjct: 78 PMGLVLAPTRELATQINATIEPMAKAMGLNTTVIYGGISQARQEKALRAGVDIVIACPGR 137
Query: 253 LLIFWRRR 276
L R+R
Sbjct: 138 LEDLIRQR 145
Score = 41.1 bits (92), Expect = 0.037
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D + + L VLDEAD M D+GF P ++K+++ Q L++SAT
Sbjct: 140 DLIRQRILTLEAVEVTVLDEADHMADLGFLPVVKKLMDMTPSQGQRLLFSAT 191
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D L K+ +L C YL LDEADR++D+GFE IR++ + + RQ L++SAT
Sbjct: 291 DMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSAT 342
Score = 50.0 bits (114), Expect = 8e-05
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Frame = +1
Query: 16 ILPAIVHIINQPRLL---RDDGPIVLVLAPTRELAQQIQQVANEFGQSI------HVRNT 168
+LP I+ + + ++ +GPI L++ P+RELA+Q +V +F + +R+
Sbjct: 201 VLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSL 260
Query: 169 CIFGGAPKGPQGRCLERGVEIVIATPGRL 255
GG Q ++RGV IV+ATPGRL
Sbjct: 261 LCIGGIDMRSQLEVVKRGVHIVVATPGRL 289
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 58.8 bits (136), Expect = 2e-07
Identities = 32/85 (37%), Positives = 46/85 (54%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + +I++PR LV+ PTRELA QI + N+ + +FGG
Sbjct: 56 LLPILHQLIDRPR----GTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIR 111
Query: 196 PQGRCLERGVEIVIATPGRLLIFWR 270
PQ RGV+++I TPGRLL +R
Sbjct: 112 PQEHAFRRGVDVLIGTPGRLLDHFR 136
Score = 56.4 bits (130), Expect = 9e-07
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPG 431
+D L +LVLDEADRMLDMGF P IR+I++ I RQ L +SAT P G
Sbjct: 132 LDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTLFFSATMPAPIG 190
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +3
Query: 258 DFLEKE-TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
D + +E +L + + +VLDEADRMLDMGFEPQI+ I RQ L++SATW
Sbjct: 179 DLMSQEGVLSLEKLSVIVLDEADRMLDMGFEPQIKTIFGATPASRQTLLFSATW 232
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCL-ERGVEIVIATPGRL 255
LV+APTRELA QIQ +FG + ++GGA Q L + IVI TPGRL
Sbjct: 119 LVVAPTRELAIQIQAECEKFGAERGFHSVVVYGGASAYEQKNALRSKKPCIVIGTPGRL 177
>UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=4; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 745
Score = 58.8 bits (136), Expect = 2e-07
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKI---IEQIRPDRQVLMWSATW 416
DF+E +L+ ++L++DEADRML++GF PQ+ + I++ R RQ MW+ATW
Sbjct: 432 DFVEAREVSLKAVSFLIMDEADRMLELGFAPQLEFLMSDIKRYRRSRQTTMWTATW 487
Score = 44.8 bits (101), Expect = 0.003
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLER--GVEIVIATP 246
P VLVL PTREL QQ ++V + ++ VR ++GG + Q + G ++++ATP
Sbjct: 369 PHVLVLCPTRELVQQTRRVFSLLSENA-VRIAGMYGGQDREQQLEYVRHMGGCDVLVATP 427
Query: 247 GRLLIFWRRRQ 279
GRL F R+
Sbjct: 428 GRLCDFVEARE 438
>UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 505
Score = 58.8 bits (136), Expect = 2e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+T N + CTY+V+DEADR+ + GF Q+R I++ IRPDRQ L++ AT
Sbjct: 252 KTVNWQFCTYVVVDEADRIFETGFLRQLRSIMDYIRPDRQTLLFGAT 298
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/83 (31%), Positives = 47/83 (56%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
++P + H++ Q + +GP L+L+PT LA+Q V ++ +S ++ + G K
Sbjct: 171 LIPLLYHVLAQGK---QEGPTALILSPTELLARQTTLVCHQLIKSTDIKCVELTGNQMKH 227
Query: 196 PQGRCLERGVEIVIATPGRLLIF 264
Q L +G +++I TPGRL+ F
Sbjct: 228 KQQSSLMKGADVIIGTPGRLMNF 250
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLI 261
L+LAPTRELA Q+ + EF + V+ +FGG P Q + L++G +IV+ TPGR++
Sbjct: 73 LILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVID 132
Query: 262 FWRRR 276
RR
Sbjct: 133 HLNRR 137
Score = 40.7 bits (91), Expect = 0.049
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RPDRQVLMWSAT 413
ID L + T L+LDEAD M++MGF +R I+++I RQ +++SAT
Sbjct: 131 IDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSAT 184
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 58.8 bits (136), Expect = 2e-07
Identities = 31/91 (34%), Positives = 46/91 (50%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LPA+ H+++ PR + P +L+L PTRELA Q+ A E + H+ I GG
Sbjct: 59 LLPALQHLLDFPRK-KSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYM 117
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQRTC 288
+IV+AT GRLL + + C
Sbjct: 118 NHAEVFSENQDIVVATTGRLLQYIKEENFDC 148
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+ ++++E + R L+LDEADRMLDMGF I I + R +Q L++SAT
Sbjct: 138 LQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRKQTLLFSAT 190
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 58.8 bits (136), Expect = 2e-07
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D L+K+ L C YL +DEADRM+DMGFE +R I + RQ L++SAT
Sbjct: 321 MDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSAT 373
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Frame = +1
Query: 16 ILPAIVHIINQPRLL---RDDGPIVLVLAPTRELAQQIQQVANEFGQSIH------VRNT 168
+LP I+ + Q L R++GP L++ P+RELA+Q ++ + + + +R+
Sbjct: 232 VLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSC 291
Query: 169 CIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
GG P + RGV IV+ATPGRL+
Sbjct: 292 LAMGGLPVSEALDVISRGVHIVVATPGRLM 321
>UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 767
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVAN-EFGQSIHVRNTCIFGGA-P 189
I+ +VH+ ++ R+DG V V+ PTREL Q ++VA +S ++ C+ GG P
Sbjct: 267 IISNLVHMGTDQKITREDGSYVFVICPTRELCIQCEEVAQLVTKKSKYLITGCLMGGENP 326
Query: 190 KGPQGRCLERGVEIVIATPGRLL 258
K + R L +GV I+ ATPGRLL
Sbjct: 327 KKEKAR-LRKGVTILFATPGRLL 348
Score = 36.3 bits (80), Expect = 1.1
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +3
Query: 300 YLVLDEADRMLDMGFEPQIRKIIEQI 377
Y+V +E+DR LDMGF+ + +I+EQ+
Sbjct: 364 YIVFEESDRTLDMGFKKDLEEIVEQL 389
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVL PTRELA QI + +G+ +++ IFGG + PQ L G++I++ATPGRLL
Sbjct: 75 LVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGRLL 133
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + + +L + VLDEADRMLDMGF I++I++ + RQ L +SAT
Sbjct: 133 LDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLFFSAT 185
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/57 (45%), Positives = 41/57 (71%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXP 425
+D ++++ +L + +VLDEADRMLDMGF IRKI++ + RQ L++SAT++ P
Sbjct: 167 LDHVKQKNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAP 223
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +1
Query: 79 VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
+LVL PTRELA QI Q + +++ +R+T +FGG Q L G EIV+AT GRLL
Sbjct: 108 MLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLL 167
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 58.4 bits (135), Expect = 2e-07
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +1
Query: 16 ILPAIVHIINQPRL---LRDDGPIVLVLAPTRELAQQIQQVANEFGQSIH----VRNTCI 174
++P I ++ N+P L +GP L+LAP RELA QI+ A + H +R I
Sbjct: 197 LIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEAQKLLNKTHELKRIRTLSI 256
Query: 175 FGGAPKGPQGRCLERGVEIVIATPGRL 255
GG Q L +GVEI+IATPGR+
Sbjct: 257 VGGRNIDQQAFSLRKGVEIIIATPGRM 283
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD--RQVLMWSAT 413
D LEK T L +C+Y++LDEADRM+D+GF+ + I++QI P+ R M+SAT
Sbjct: 285 DCLEKTLTVLVQCSYVILDEADRMIDLGFQDSLNFILDQIPPEIQRTTHMFSAT 338
>UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11;
Pezizomycotina|Rep: DEAD-box protein 3 - Aspergillus
terreus (strain NIH 2624)
Length = 590
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+VLV+APTREL+ QI A +R ++GGAP Q L++G +I+I TPGR
Sbjct: 214 PLVLVVAPTRELSMQIFDEARRLCYRSMLRPCVVYGGAPVRDQREELQKGCDILIGTPGR 273
Query: 253 LLIF 264
LL F
Sbjct: 274 LLDF 277
Score = 34.7 bits (76), Expect = 3.2
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +3
Query: 255 IDFLEK-ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE----QIRPDRQVLMWSATW 416
+DF++K +LRR Y ++DEAD +L +E +I+ D + +M+SAT+
Sbjct: 275 LDFMDKPHILSLRRVRYTIIDEADELLQSDWESDFNRIMSGGDVNEDADHRYMMFSATF 333
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 58.0 bits (134), Expect = 3e-07
Identities = 27/54 (50%), Positives = 41/54 (75%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+D L + T+L + LVLDEADRMLDMGF P I++I++++ +RQ L++SAT+
Sbjct: 139 LDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEERQTLLFSATF 192
Score = 56.4 bits (130), Expect = 9e-07
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P L+LAPTRELAQQ+ ++ Q + ++GG Q L +GV+I+IATPGR
Sbjct: 78 PRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIATPGR 137
Query: 253 LL 258
LL
Sbjct: 138 LL 139
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 58.0 bits (134), Expect = 3e-07
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
++P + +IN + D LV+APTRELA QI +V + G +R CI GG +
Sbjct: 56 VIPVLNTLINVKKSEHTDISC-LVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQE 114
Query: 196 PQGRCLERGVEIVIATPGRL 255
Q + G++I++ATPGR+
Sbjct: 115 AQIAAADYGIDILVATPGRM 134
Score = 39.5 bits (88), Expect = 0.11
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D + ++ + R LVLDEAD MLD+GF I+ + + + Q L +SAT
Sbjct: 136 DLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVKKFLPARHQTLFFSAT 187
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 58.0 bits (134), Expect = 3e-07
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P LV+APTRELA Q+ ++ + + + GG G Q + L+RGV+++IATPGR
Sbjct: 74 PRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDRGVDVLIATPGR 133
Query: 253 LLIFWRR 273
LL + R
Sbjct: 134 LLDHFER 140
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D E+ + +LV+DEADRMLDMGF P I +I + P +Q L +SAT
Sbjct: 135 LDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQTLFFSAT 187
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/79 (36%), Positives = 42/79 (53%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P LV+ PTRELA Q+ Q + + ++GGA G Q + LE G EI++ TPGR
Sbjct: 89 PSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAEIIVGTPGR 148
Query: 253 LLIFWRRRQRTCADALIWC 309
+ RRR + ++ C
Sbjct: 149 IYDHIRRRTLKLDETMVCC 167
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D + + T L LDEAD ML+MGF ++ +I++ + D Q L++SAT
Sbjct: 151 DHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLLFSAT 202
>UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1;
Marinobacter sp. ELB17|Rep: ATP-dependent RNA helicase -
Marinobacter sp. ELB17
Length = 463
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP--DRQVLMWSATW 416
IDFL + L + L+LDEADRMLDMGF P +++II + P DRQ L++SAT+
Sbjct: 181 IDFLGSQDVFLDQIDILILDEADRMLDMGFIPDVKRIIRKCTPKEDRQTLLFSATF 236
Score = 43.2 bits (97), Expect = 0.009
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERG-VEIVIATPG 249
P VL LAPTRELA QI + A + + + GG Q L+ V+I++ATPG
Sbjct: 119 PRVLALAPTRELAMQIAKDAEQLCAHTGHKVVTVVGGMHYDKQRDQLQNEVVDILVATPG 178
Query: 250 RLLIF 264
RL+ F
Sbjct: 179 RLIDF 183
>UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 491
Score = 58.0 bits (134), Expect = 3e-07
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
++PAI ++ + + DG IVL++APTRELA QI VA + V +GG K
Sbjct: 82 LIPAI-DLLFRKNATKKDGTIVLIVAPTRELADQIFDVATLLLKDTEVSFGAAYGGKEKK 140
Query: 196 PQGRCLERGVEIVIATPGRL 255
+ L+ G+ +++ATPGRL
Sbjct: 141 NETTLLKSGINLLVATPGRL 160
Score = 41.9 bits (94), Expect = 0.021
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 282 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+L L++DEADR+L+ G++ Q+ I+E I +RQ ++SAT
Sbjct: 171 SLENLKMLIIDEADRILEDGYKDQLHAIVEGIPSERQTALFSAT 214
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP--DRQVLMWSATW 416
+DF ++ +L +VLDEADRMLDMGF PQ+R+II Q P +RQ L++SAT+
Sbjct: 147 LDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATF 202
Score = 42.3 bits (95), Expect = 0.016
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLE-RGVEIVIATPG 249
P L++APTREL QI + A + + GG Q + LE R +I++ATPG
Sbjct: 85 PRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKALEARHCDILVATPG 144
Query: 250 RLLIFWRR 273
RLL F +R
Sbjct: 145 RLLDFNQR 152
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D L+K+ L C YL +DEADRM+DMGFE +R I RQ L++SAT
Sbjct: 323 MDMLDKKMVKLGVCRYLCMDEADRMIDMGFEEDVRTIFSFFEGQRQTLLFSAT 375
Score = 52.4 bits (120), Expect = 2e-05
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Frame = +1
Query: 16 ILPAIVHIINQPRLL---RDDGPIVLVLAPTRELAQQIQQVANEFGQSIH------VRNT 168
+LP I+ + Q L R++GP L++ P+RELA+Q + + S+ +R
Sbjct: 234 VLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDIIQHYTNSLRHHHCPEIRCC 293
Query: 169 CIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
GG P + RGV I++ATPGRL+
Sbjct: 294 LAIGGVPVSESLDVISRGVHIMVATPGRLM 323
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 57.6 bits (133), Expect = 4e-07
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 VLVLAPTRELAQQIQQVANEFGQSIH-VRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 255
VLV+ PTRELA Q+ + F + V ++GGAP GPQ + L++G IV+ TPGRL
Sbjct: 79 VLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGTAIVVGTPGRL 138
Query: 256 L 258
+
Sbjct: 139 I 139
Score = 38.7 bits (86), Expect = 0.20
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID L K L VLDEAD ML+MGF I I++ + Q ++SAT
Sbjct: 139 IDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQRALFSAT 191
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 57.6 bits (133), Expect = 4e-07
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQ-SIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPG 249
P VLVLAPTRELAQQ+ + + +V+ I+GG+ G Q R L++G + V+ TPG
Sbjct: 75 PQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQWVVGTPG 134
Query: 250 RLLIFWRR 273
R++ RR
Sbjct: 135 RVMDHIRR 142
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + + T L +VLDEAD ML MGF + +++Q+ RQ+ ++SAT
Sbjct: 137 MDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFSAT 189
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 57.6 bits (133), Expect = 4e-07
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFG-QSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
LVLAPTRELA Q Q +F ++ + ++GG+P GPQ L+RG ++V+ TPGR++
Sbjct: 117 LVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQIGALKRGAQVVVGTPGRVI 176
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
ID +EK +L LVLDEAD ML MGF + I DR ++SAT
Sbjct: 176 IDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAPDDRLTALFSAT 228
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 57.6 bits (133), Expect = 4e-07
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+VLVL PTRELAQQ+ + ++GG+P+ PQ + +++GV+IV+ PGR
Sbjct: 141 PLVLVLLPTRELAQQVSNEFELMKGKDRYKVCSVYGGSPEYPQIQEIKKGVDIVVGCPGR 200
Query: 253 LLIFWRR 273
+L F R
Sbjct: 201 VLDFIER 207
Score = 46.8 bits (106), Expect = 7e-04
Identities = 19/44 (43%), Positives = 32/44 (72%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 386
+DF+E+ N+ + + L LDEAD+ML+MGF+ + KII+ +R +
Sbjct: 202 LDFIERGILNVSKISVLTLDEADKMLEMGFKETVDKIIDCVRKE 245
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 57.6 bits (133), Expect = 4e-07
Identities = 31/83 (37%), Positives = 42/83 (50%)
Frame = +1
Query: 67 DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATP 246
D P+ L+L PTREL QQ+ +E I + GG P Q L G ++V+ATP
Sbjct: 112 DTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPVCGGVPVSTQTIALREGADVVVATP 171
Query: 247 GRLLIFWRRRQRTCADALIWCWM 315
GRLL +R C D + + M
Sbjct: 172 GRLLDLC-KRGALCLDKITYLVM 193
Score = 51.6 bits (118), Expect = 3e-05
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKII---EQIRPDRQVLMWSAT 413
+D ++ L + TYLV+DEADRML MG E Q+RKI+ RQ L+WSAT
Sbjct: 175 LDLCKRGALCLDKITYLVMDEADRMLGMGMEEQLRKIVGLATGTSRARQTLLWSAT 230
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 57.6 bits (133), Expect = 4e-07
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIE----QIRPDRQVLMWSATW 416
+D + KE L++ YLVLDEADRMLDMGF P+++K+I + RQ LM+SAT+
Sbjct: 427 MDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATF 484
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 16 ILPAIVHI----INQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGG 183
+LP + H+ I R P +++APTREL QI A +F VR I+GG
Sbjct: 343 LLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGG 402
Query: 184 APKGPQGRCLERGVEIVIATPGRLL 258
G R + +G I+ ATPGRL+
Sbjct: 403 TQLGHSIRQIVQGCNILCATPGRLM 427
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 57.2 bits (132), Expect = 5e-07
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P L+LAPTRELA Q+ + G+ + I+GG P Q R L+ GV+IV+ TPGR
Sbjct: 75 PKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGVDIVVGTPGR 134
Query: 253 LLIFWRRR 276
+L RR+
Sbjct: 135 VLDLIRRK 142
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/53 (41%), Positives = 37/53 (69%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D + +++ L +LVLDEAD ML+MGF + +I++ ++ DRQ L++SAT
Sbjct: 136 LDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLFSAT 188
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 57.2 bits (132), Expect = 5e-07
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP + + +P ++ L+L PTRELA Q+ + + + +++ I+GG
Sbjct: 57 LPILQKMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMAT 116
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q + L++G +I++ATPGRLL
Sbjct: 117 QAQKLKQGADIIVATPGRLL 136
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +3
Query: 282 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+L +LVLDEADRMLDMGF I+KI++ + RQ L++SAT++
Sbjct: 145 SLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKKRQNLLFSATFS 190
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 57.2 bits (132), Expect = 5e-07
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P L+L PTRELA Q+++ +++G + + + GG Q R LERG +++IATPGR
Sbjct: 78 PRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLERGADVLIATPGR 137
Query: 253 LLIFWRR 273
LL + R
Sbjct: 138 LLDHFER 144
Score = 50.0 bits (114), Expect = 8e-05
Identities = 27/55 (49%), Positives = 33/55 (60%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
+D E+ T L LV+DEADRMLDMGF P I +I + RQ L +SAT A
Sbjct: 139 LDHFERGTLLLMGVEILVIDEADRMLDMGFIPDIERICKLTPFTRQTLFFSATMA 193
>UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=6;
Trypanosomatidae|Rep: Nucleolar RNA helicase II,
putative - Leishmania major
Length = 674
Score = 57.2 bits (132), Expect = 5e-07
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 19 LPAIVHIINQP-RLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+P + ++ P L R GP ++ PTRELA Q+Q V G S + T ++GG
Sbjct: 142 IPIVERLLKLPSHLTRGRGPAAVIFCPTRELAIQVQDVL--CGISCGLVVTALYGGVAYA 199
Query: 196 PQGRCLERGVEIVIATPGR 252
Q R L GV+IV+ATPGR
Sbjct: 200 NQERVLRSGVDIVVATPGR 218
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 10/62 (16%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI----------RPDRQVLMWS 407
DFLEK T + R LDEAD MLD+GF+ I ++ Q+ RP Q L++S
Sbjct: 221 DFLEKGTLHFDRVVMACLDEADHMLDIGFKDDIELLLSQVAEQNGSVGAERPAHQTLLFS 280
Query: 408 AT 413
AT
Sbjct: 281 AT 282
>UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 620
Score = 57.2 bits (132), Expect = 5e-07
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSI-HVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L+LAPTREL QI++ EF + ++R + GG P PQ L+ GV++++ATPGR++
Sbjct: 278 LILAPTRELCMQIEKQTKEFVHGMTNMRTALLIGGVPVPPQLHRLKMGVQVIVATPGRMV 337
Score = 46.4 bits (105), Expect = 0.001
Identities = 29/110 (26%), Positives = 54/110 (49%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
++ + ++ +L V+DE D ML +GFE Q+++I+E++ RQ +++SAT PP
Sbjct: 337 VEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSAT--IPPSI 394
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
P + S +L + Q++ EE K +L ++L
Sbjct: 395 EAMASRLLNAPVFISAG----SPSLPTKAVKQLILWVEEKSKKKQLFSIL 440
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 57.2 bits (132), Expect = 5e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +1
Query: 61 RDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIA 240
R P VLVLAPTRELA Q+ + ++ + + V C +GG P G Q + G++I++
Sbjct: 257 RGRAPQVLVLAPTRELANQVSKDFSDITKKLSV--ACFYGGTPYGGQFERMRNGIDILVG 314
Query: 241 TPGRL 255
TPGR+
Sbjct: 315 TPGRI 319
Score = 38.7 bits (86), Expect = 0.20
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKII-----EQIRPDRQVLMWSAT 413
D ++ +L + ++VLDE D+MLDMGF Q+ +I+ + + Q L++SAT
Sbjct: 321 DHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSAT 377
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 56.8 bits (131), Expect = 7e-07
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P ++L PTRELA Q+ +G + ++ + GG G Q LERGV++++ATPGR
Sbjct: 133 PRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGVDVLVATPGR 192
Query: 253 L 255
L
Sbjct: 193 L 193
Score = 43.6 bits (98), Expect = 0.007
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D + + +L VLDEAD+M D+GF P++ ++++Q+ Q +++SAT
Sbjct: 195 DIINRGACSLENVQIAVLDEADQMSDLGFLPEVTELLDQVPAGGQRMLFSAT 246
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 56.8 bits (131), Expect = 7e-07
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP I ++ + L+ APTRELA+QI + + ++ IFGG
Sbjct: 57 LPLIQQLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSS 116
Query: 199 QGRCLERGVEIVIATPGRL 255
Q R LE GV+I++ATPGRL
Sbjct: 117 QERMLENGVDILVATPGRL 135
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+ +E ++ +LV DEADR+LDMGF +RKI+ + + Q++M+SAT
Sbjct: 137 EHIESGNVSVANIEFLVFDEADRILDMGFINAVRKIMLDVETNPQIMMFSAT 188
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 56.8 bits (131), Expect = 7e-07
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P+ +VLAPTRELA+Q+ + G S ++ C++GG P Q L G ++VI TPGR
Sbjct: 163 PMCVVLAPTRELAKQVFADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIGTPGR 222
Query: 253 L 255
+
Sbjct: 223 M 223
Score = 42.3 bits (95), Expect = 0.016
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D LE++T + + + VLDEAD ML+MGF + I++ D Q L++SAT
Sbjct: 225 DHLERKTLMMDKLKFRVLDEADEMLNMGFVDDVELILKS-SGDVQTLLFSAT 275
>UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_79919_77949 - Giardia lamblia
ATCC 50803
Length = 656
Score = 56.8 bits (131), Expect = 7e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P ++++PTREL QQ + + + +GG P GPQ L+ G +I++ATPGR
Sbjct: 221 PFCIIMSPTRELVQQTAKASWMLSYGTSILTRVAYGGDPSGPQRDALQMGCDILVATPGR 280
Query: 253 LLIF 264
LL F
Sbjct: 281 LLDF 284
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 383
+DF+++ ++V DE DRMLDMGFEPQIR I+ ++ P
Sbjct: 282 LDFIKQGVVETTYVRFVVFDECDRMLDMGFEPQIRDILHELPP 324
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 56.8 bits (131), Expect = 7e-07
Identities = 33/83 (39%), Positives = 42/83 (50%)
Frame = +1
Query: 7 GHNILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
G +LP H+ P LV APTRELA QI V + G+ I VR I GG
Sbjct: 58 GAYMLPIFHHMWENPHSF-----FALVFAPTRELATQIDHVTRDIGKDIKVRVCTIIGGV 112
Query: 187 PKGPQGRCLERGVEIVIATPGRL 255
+ Q + L+ +V+ATPGRL
Sbjct: 113 DEDSQVKALKAQPHVVVATPGRL 135
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 56.4 bits (130), Expect = 9e-07
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+D +EK T +L R YLV+DEAD ML+MGF Q+ II+++ R +++SAT
Sbjct: 134 LDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSAT 186
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = +1
Query: 64 DDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIAT 243
++ P LVL PTRELA Q+++ G+ ++ I+G +P Q L++ IV+ T
Sbjct: 70 ENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGT 129
Query: 244 PGRLL 258
PGR+L
Sbjct: 130 PGRVL 134
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+D LE+ +L T LVLDEADRML+MGF+ + I++ I RQ L++SAT+
Sbjct: 152 LDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSLNAIVKHIPKTRQTLLFSATY 205
Score = 50.0 bits (114), Expect = 8e-05
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQS-IHVRNTCIFGGAPKGPQGRCLERGVEIVIATPG 249
P LVL PTRELA Q+ + +S ++++ + GG P Q LE G +++ TPG
Sbjct: 90 PQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGGEPSRIQTNSLEHGAHVLVGTPG 149
Query: 250 RLL 258
R+L
Sbjct: 150 RVL 152
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +3
Query: 264 LEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
L+ T NL++ +LVLDEADRMLDMGF I ++I + +RQ +M+SAT
Sbjct: 138 LQSGTANLKQIKHLVLDEADRMLDMGFYDDIVRVISYLPTERQTIMFSAT 187
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFG---GAPKGPQGRCLERGVEIVIATPGR 252
LVL PTRELA QI Q F I+V + ++G GA Q + L G IVIATPGR
Sbjct: 74 LVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKALTDGANIVIATPGR 133
Query: 253 LL 258
LL
Sbjct: 134 LL 135
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
DF+ + NL L+LDE+DRMLDMGF P I++II + +RQ L++SAT
Sbjct: 135 DFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLFSAT 186
Score = 53.6 bits (123), Expect = 6e-06
Identities = 32/86 (37%), Positives = 43/86 (50%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP I + +PR G L+L PTRELA QI + + + +R GG +
Sbjct: 57 LLPTIQLLSTEPR---QPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNER 113
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRR 273
Q R + G IV+ATPGRL F R
Sbjct: 114 SQLRDIRGGANIVVATPGRLYDFMSR 139
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 56.4 bits (130), Expect = 9e-07
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P LV+ PTRELA Q+ + + + R I+GG PQ L++GVEIV+ TPGR
Sbjct: 116 PQALVIVPTRELAVQVAKDLENAARKRNARIATIYGGRAYEPQVDSLQKGVEIVVGTPGR 175
Query: 253 LLIFWRRR 276
L+ ++++
Sbjct: 176 LIDLYKQK 183
Score = 47.2 bits (107), Expect = 6e-04
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXP 425
ID +++ +L+ ++LDEAD MLD+GF P + +I RQ L++SAT P
Sbjct: 177 IDLYKQKHLSLKNVKIVILDEADEMLDLGFLPDVETLIAGTPAVRQTLLFSATMPGP 233
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,581,242
Number of Sequences: 1657284
Number of extensions: 18882329
Number of successful extensions: 48787
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 45087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48411
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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