Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0311
(893 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 121 7e-28
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 4e-19
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 3e-12
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 8e-11
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 61 1e-09
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 55 7e-08
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 53 3e-07
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 53 3e-07
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 4e-07
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 4e-07
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 51 1e-06
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 51 1e-06
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 50 2e-06
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 48 8e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 48 1e-05
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 48 1e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 46 3e-05
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 40 0.002
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 37 0.019
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 36 0.044
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 36 0.058
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.058
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 34 0.18
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.2
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 30 2.2
SB_15883| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_12713| Best HMM Match : TP2 (HMM E-Value=2.9) 30 2.9
SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031) 29 3.8
SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031) 29 3.8
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_46946| Best HMM Match : RVT_1 (HMM E-Value=0.7) 29 6.7
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 28 8.9
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 28 8.9
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 121 bits (292), Expect = 7e-28
Identities = 79/180 (43%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
ILP IVHI +QP L DGPIVLVL PTRELAQQ+Q+VA G+ +R+TCI+GGAPKG
Sbjct: 114 ILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKG 173
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQ---RTCADALIWCWMRLIECWTWAXXXXXXXX 366
PQ R LERGVEI IATPGRL+ R+ R C ++ R+++
Sbjct: 174 PQIRELERGVEICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLD----MGFEPQIRT 229
Query: 367 XXXXXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSLELWPTTTSSRLLMFV 546
D+ Q EVQ LA +FL DY+ +GSL L T + ++L V
Sbjct: 230 IIDQIRPDR----QTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGL---TANHKILQIV 282
Score = 116 bits (279), Expect = 3e-26
Identities = 64/102 (62%), Positives = 68/102 (66%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
ID LE TNLRRCTYLVLDEADRMLDMGFEPQIR II+QIRPDRQ LMWSATW P
Sbjct: 194 IDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATW--PKEV 251
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEK 560
G + +H ANH ILQIVDVCE+ EK
Sbjct: 252 QGLAHDF--LSDYVHITVGSLG-LTANHKILQIVDVCEDHEK 290
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 92.7 bits (220), Expect = 4e-19
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +1
Query: 22 PAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQ 201
PA+VHI++QP L DGPIVL+ APTREL QQI A FG++ ++ +FGG K Q
Sbjct: 574 PALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQ 633
Query: 202 GRCLERGVEIVIATPGRLL 258
+ L+ G EIV+ATPGRL+
Sbjct: 634 SKALQEGAEIVVATPGRLI 652
Score = 46.0 bits (104), Expect = 4e-05
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGF 344
ID ++ + TNL R TYLV DEADRM DMGF
Sbjct: 652 IDHVKAKATNLHRVTYLVFDEADRMFDMGF 681
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 69.7 bits (163), Expect = 3e-12
Identities = 36/54 (66%), Positives = 41/54 (75%), Gaps = 8/54 (14%)
Frame = +3
Query: 279 TNLRRCTYLVLDEADRMLDMGFEPQIRK--------IIEQIRPDRQVLMWSATW 416
TN +RCTYLVLDEADRM DMGFEPQI K II+ IRPDRQ +M+SAT+
Sbjct: 217 TNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATF 270
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +1
Query: 49 PRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVE 228
P ++ I +V+ PTRELA QI + +F + ++R C++GG Q L+RG E
Sbjct: 137 PVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAE 196
Query: 229 IVIATPGRLL 258
I++ TPGR++
Sbjct: 197 IIVCTPGRMI 206
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 64.9 bits (151), Expect = 8e-11
Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 4/57 (7%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQVLMWSATW 416
DF+EK +L+ +L+LDEADRMLDMGFEP IR+I+E + + +RQ LM+SAT+
Sbjct: 851 DFIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSATF 907
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P + +APTRELA QI A +F +R +GG Q R L+ G +++ TPGR
Sbjct: 789 PQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGR 848
Query: 253 LLIF 264
L F
Sbjct: 849 LTDF 852
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 61 RDDGPIVLVLAPTRELAQQIQQVANEFGQ-SIHVRNTCIFGGAPKGPQGRCLERGVEIVI 237
R P VLV+APTRELA+Q V NEF ++ CI+GG P PQ + G+++++
Sbjct: 144 RGRAPKVLVMAPTRELAKQ---VGNEFENLKSNLEVYCIYGGMPYEPQENAINSGLDVLV 200
Query: 238 ATPGRLLIFWRR 273
TPGR+L F R+
Sbjct: 201 GTPGRILDFMRQ 212
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKII----EQIRPDR-QVLMWSAT 413
+DF+ + T +L + ++VLDE DRMLDMGF + +++ + R D+ Q L++SAT
Sbjct: 207 LDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFSAT 264
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 59.3 bits (137), Expect = 4e-09
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ-IRPD---RQVLMWSATW 416
+D +++ L +LVLDEADRMLDMGFEPQIR+I++Q P RQ LM+SAT+
Sbjct: 987 VDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATF 1044
Score = 34.3 bits (75), Expect = 0.13
Identities = 29/114 (25%), Positives = 47/114 (41%)
Frame = +1
Query: 160 RNTCIFGGAPKGPQGRCLERGVEIVIATPGRLLIFWRRRQRTCADALIWCWMRLIECWTW 339
R ++GGA G Q R L+R +++ATPGR L+ R R D++ + + +
Sbjct: 955 RPCVVYGGADIGSQLRELDRNCHLLVATPGR-LVDMMDRGRVGLDSIRFLVLDEADRMLD 1013
Query: 340 AXXXXXXXXXXXXXXIDKY*CGQLHXXXXXXXXEVQNLAEEFLHDYIQXNIGSL 501
+ K Q E+Q LA +FL +YI +G +
Sbjct: 1014 MGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKV 1067
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 255
LVLAPTRELAQQIQ+V G +HV+ GG LE GV +V+ TPGR+
Sbjct: 163 LVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRV 220
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D + + N R VLDEAD ML GF+ QI + ++ QV++ SAT
Sbjct: 222 DMINRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSAT 273
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 56.0 bits (129), Expect = 4e-08
Identities = 31/88 (35%), Positives = 44/88 (50%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 195
+LP + +I Q P+ L +APTRELA+QI A +F ++ +GG
Sbjct: 534 MLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVP 593
Query: 196 PQGRCLERGVEIVIATPGRLLIFWRRRQ 279
Q LERG ++ TPGRL F R +
Sbjct: 594 YQASQLERGCHFLVGTPGRLQDFVSREK 621
Score = 55.2 bits (127), Expect = 7e-08
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQVLMWSATW 416
DF+ +E L +L+LDEADRMLD+GF P I K+IE+ + RQ LM+SAT+
Sbjct: 615 DFVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSATF 671
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 55.2 bits (127), Expect = 7e-08
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDD----GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 186
+P +V I+ P++ RD+ GP L+LAPTRELAQQI++ +FG+ + +R + GGA
Sbjct: 157 IPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGA 216
Query: 187 PK 192
+
Sbjct: 217 DR 218
Score = 38.7 bits (86), Expect = 0.006
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 297 TYLVLDEADRMLDMGFEPQIRKIIEQI 377
T V+ ADRM+DMGFEP+++KI+E +
Sbjct: 209 TVSVIGGADRMIDMGFEPEVQKILEHL 235
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 53.2 bits (122), Expect = 3e-07
Identities = 31/68 (45%), Positives = 37/68 (54%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P LVL+PTRELA QIQ+V G + V+ GG G R L+ G IV TPGR
Sbjct: 66 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 125
Query: 253 LLIFWRRR 276
+ RRR
Sbjct: 126 VFDMIRRR 133
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
D + + R LVLDEAD ML+ GF+ QI + + P QV++ SAT
Sbjct: 128 DMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSAT 179
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 53.2 bits (122), Expect = 3e-07
Identities = 20/54 (37%), Positives = 40/54 (74%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+D ++K+ ++ +C LV+DEAD++L M F+ + +II+ + +RQ+L++SAT+
Sbjct: 184 LDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATF 237
Score = 35.5 bits (78), Expect = 0.058
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP-KGPQGRCLERG------VEIVIA 240
LVL PTRELA Q Q+ E G+ + + GG K R + V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 241 TPGRLLIFWRRR 276
TPGR+L +++
Sbjct: 179 TPGRVLDLMKKK 190
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 53.2 bits (122), Expect = 3e-07
Identities = 20/54 (37%), Positives = 40/54 (74%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+D ++K+ ++ +C LV+DEAD++L M F+ + +II+ + +RQ+L++SAT+
Sbjct: 184 LDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATF 237
Score = 35.5 bits (78), Expect = 0.058
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP-KGPQGRCLERG------VEIVIA 240
LVL PTRELA Q Q+ E G+ + + GG K R + V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 241 TPGRLLIFWRRR 276
TPGR+L +++
Sbjct: 179 TPGRVLDLMKKK 190
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +3
Query: 282 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
N+ YLVLDEADRM+DMGFE +R I + RQ L++SAT
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSAT 56
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 52.8 bits (121), Expect = 4e-07
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +3
Query: 282 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
N+ YLVLDEADRM+DMGFE +R I + RQ L++SAT
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSAT 56
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 51.2 bits (117), Expect = 1e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +3
Query: 303 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
LVLDEADR+LDMGF P + IIE + +RQ L++SAT
Sbjct: 200 LVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSAT 236
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 67 DGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP-KGPQGRCLERGVEIVIAT 243
DG LV++PTRELA Q +V + G + I GG K Q R ++ IV+ T
Sbjct: 121 DGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIVVCT 178
Query: 244 PGRLL 258
PGRLL
Sbjct: 179 PGRLL 183
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/63 (44%), Positives = 35/63 (55%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 252
P LVL+PTRELA QIQ+V G + V+ GG G R L+ G IV TPGR
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 63
Query: 253 LLI 261
+ +
Sbjct: 64 VFV 66
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 50.4 bits (115), Expect = 2e-06
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
LP + +++ P+ L L+L PTRELA QI + G I V+ I GG
Sbjct: 20 LPILQALLDNPQRL-----FALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMS 74
Query: 199 QGRCLERGVEIVIATPGRLL 258
Q L + I+IATPGRL+
Sbjct: 75 QALMLAKKPHIIIATPGRLI 94
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 255 IDFLEK-ETTNLRRCTYLVLDEADRMLDMGFEPQ 353
ID LE + +LR YLV+DEADR+L+M FE +
Sbjct: 94 IDHLENTKGFSLRTLKYLVMDEADRILNMDFEKE 127
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +1
Query: 19 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 198
L +V ++ + + +G V++++PTREL+ Q VA + + + I GG +
Sbjct: 627 LVPVVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKA 686
Query: 199 QGRCLERGVEIVIATPGRLL 258
+ L++GV ++IATPGRLL
Sbjct: 687 EAERLQKGVNLLIATPGRLL 706
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/37 (51%), Positives = 30/37 (81%)
Frame = +3
Query: 303 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
LV+DEADR+L++GFE ++R+II + RQ +++SAT
Sbjct: 723 LVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSAT 759
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3
Query: 336 MGFEPQIRKIIEQIRPDRQVLMWSATWAXPPG 431
MGFEP+I+KI+ IRPDRQ +M SATW PPG
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATW--PPG 30
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 48.4 bits (110), Expect = 8e-06
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 282 NLRRCTYLVLDEADRMLDMGFEPQIRKII---EQIRPDRQVLMWSAT 413
+L + TYLV+DE DRML MG E Q+RKI+ RQ L+WSAT
Sbjct: 230 DLYKITYLVMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSAT 276
Score = 39.1 bits (87), Expect = 0.005
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Frame = +1
Query: 67 DGPIVLVLAPTRELAQQIQQVANEF-------------GQSI---------HVRNTCIFG 180
D P+ L+L PTREL QQ+ +E QS+ + + G
Sbjct: 144 DTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSVIYDTQQFTARYKAVAVCG 203
Query: 181 GAPKGPQGRCLERGVEIVIATPGRLLIFWR 270
G P Q L G ++V+ATPGRLL ++
Sbjct: 204 GVPVSTQTIALREGADVVVATPGRLLDLYK 233
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.0 bits (109), Expect = 1e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 76 IVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 255
+ L++APTRELA Q++ + + V+ I GG Q R L++ EIV+ATPGRL
Sbjct: 220 LALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL 279
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 267 EKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
EK +N++ YLV+DEADRM++ G ++ I+E I
Sbjct: 331 EKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +3
Query: 303 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWA 419
LVLDEADRMLDMGF IR+++ ++ RQ L++SAT++
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFS 45
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 273 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 413
+T NL++ +LVLDEADR+LD F ++ I + + RQ L++SAT
Sbjct: 144 DTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSAT 190
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/62 (41%), Positives = 31/62 (50%)
Frame = +1
Query: 70 GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPG 249
G +VL PTRELA QI G+ I ++ I GG Q L +VIATPG
Sbjct: 75 GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPG 134
Query: 250 RL 255
RL
Sbjct: 135 RL 136
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 46.4 bits (105), Expect = 3e-05
Identities = 29/110 (26%), Positives = 54/110 (49%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWAXPPGX 434
++ + ++ +L V+DE D ML +GFE Q+++I+E++ RQ +++SAT PP
Sbjct: 267 VEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSAT--IPPSI 324
Query: 435 XGSXESS*RVPA*LHPXQHWFS*ALANHNILQIVDVCEEWEKNXKLITLL 584
P + S +L + Q++ EE K +L ++L
Sbjct: 325 EAMASRLLNAPVFISAG----SPSLPTKAVKQLILWVEEKSKKKQLFSIL 370
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +1
Query: 55 LLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIV 234
L R P ++ P RELA QI + A R+ + GG + LE V+++
Sbjct: 450 LARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLL 509
Query: 235 IATPGRLLIFWRRRQR 282
+ATPG LL + R++ R
Sbjct: 510 VATPGTLLKY-RQKDR 524
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
+ + +K+ T+LV+DEAD M D F+ +I+ I
Sbjct: 517 LKYRQKDRLFFSDLTHLVIDEADTMFDASFKSLTMEILHTI 557
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 37.1 bits (82), Expect = 0.019
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 264 LEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW 416
+E++ +LDEAD++LD F+ QI I + ++Q++ +SAT+
Sbjct: 146 IEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATY 196
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 79 VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 255
+++L PTRE+A Q++ V G +F G + + + I + TPGR+
Sbjct: 84 IIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRV 142
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 36.3 bits (80), Expect = 0.033
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 267 EKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
E+ +N++ YLV+DEADRM++ G ++ I+E I
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSILELI 38
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 35.9 bits (79), Expect = 0.044
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +1
Query: 73 PIVLVLAPTRELAQQIQQVANEFGQSI-HVR-NTCIFGGA-PKGPQGRCLERGVEIVIAT 243
P V+ L+PT ELA+Q +VA G+ H++ N + G P+G +C + I+I T
Sbjct: 174 PQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQ--KCTD---HIIIGT 228
Query: 244 PGRLLIFWRRRQR 282
PG LL W R+ +
Sbjct: 229 PGTLL-DWIRKSK 240
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 288 RRCTYLVLDEADRMLDM-GFEPQIRKIIEQIRPDRQVLMWSATW 416
R+ + VLDEAD M+ + G + Q +I + + D QVL++SAT+
Sbjct: 245 RKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLLFSATY 288
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 35.5 bits (78), Expect = 0.058
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 67 DGPI-VLVLAPTRELAQQIQQVANEFGQSI-HVRNTCIFGGAP-KGPQGRCLERGVEIVI 237
DG + VLV+ TRELA QI + F + + +++ FGG K Q IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 238 ATPGRLLIFWRRR 276
TPGR+L R +
Sbjct: 173 GTPGRILALTREK 185
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 35.5 bits (78), Expect = 0.058
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 67 DGPI-VLVLAPTRELAQQIQQVANEFGQSI-HVRNTCIFGGAP-KGPQGRCLERGVEIVI 237
DG + VLV+ TRELA QI + F + + +++ FGG K Q IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 238 ATPGRLLIFWRRR 276
TPGR+L R +
Sbjct: 173 GTPGRILALTREK 185
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 34.7 bits (76), Expect = 0.10
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
L+L+PTRELA Q Q+ E G+ ++++ I GG + V+ATPGR L
Sbjct: 355 LILSPTRELALQTQKFIKELGRFTGLKSSVILGG--------------DSVVATPGRFL 399
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 255 IDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 392
+D ++K T R LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 25 VDGIDKLDT--RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 258 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 377
DF+ + +L + + +LDEAD +L G I KI +I
Sbjct: 148 DFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +1
Query: 16 ILPAIVHIINQPRLLRD----DGPIVLVLAPTRELAQQIQQVANEFGQSIH-VRNTCIFG 180
+LP I+H I + + ++ +GP+VL+L + ++ V + ++ R IFG
Sbjct: 242 LLP-IIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRTRVQMIFG 300
Query: 181 GAPKGPQGRCLERGVEIVIATPGRLLIFWRR 273
G + + L G E+++ATP L +R
Sbjct: 301 GGAEEDRIVPLINGCEVLVATPPCFLRMLKR 331
>SB_15883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 389 SIRSNLFNNLPDLRLEAHVQHSISLIQHQISASAQV--RCLLLQKINSLPGVA 237
S + L N D+ + + QH L+ +SA+ C+LLQ++N+ GVA
Sbjct: 109 STETALLKNANDILINMNSQHVTLLVLLDLSAAFDTIDHCILLQRLNTSFGVA 161
>SB_12713| Best HMM Match : TP2 (HMM E-Value=2.9)
Length = 349
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = -3
Query: 345 RSPCP--TFYQPHPAPNKCIGAGSLSPSPKN--Q*STRSSNNNFHSPLKTSALWSLWSTT 178
R+P P T++ H A KC G S P N + T+S +NN + K + T
Sbjct: 56 RAPAPRDTWWAEHQA--KCGGTFSKVKEPDNYKKKKTKSKDNNSETKAKAGTSGLAKNKT 113
Query: 177 KDTSVPHVDAL 145
KD P++ +L
Sbjct: 114 KDNGTPNLPSL 124
>SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 127
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 13 NILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQ-QIQQVANEFGQSIHVRNTCIFGGAP 189
++LPA++H R + + P+V++++P L + QI ++ +E + T G
Sbjct: 34 HLLPALLHKQRLLRNVSGNPPVVIIISPLSSLIRDQISRLPSERATQLRRSETSEVGDEF 93
Query: 190 KGPQGRCLER-GVEIVIATPG 249
+ + LE G E + PG
Sbjct: 94 RDCEKSKLENGGYEFLFCPPG 114
>SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 233
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 13 NILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQ-QIQQVANEFGQSIHVRNTCIFGGAP 189
++LPA++H R + + P+V++++P L + QI ++ +E + T G
Sbjct: 140 HLLPALLHKQRLLRNVSGNPPVVIIISPLSSLIRDQISRLPSERATQLRRSETSEVGDEF 199
Query: 190 KGPQGRCLER-GVEIVIATPG 249
+ + LE G E + PG
Sbjct: 200 RDCEKSKLENGGYEFLFCPPG 220
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 69 WSNSPCVGSNKRVSPTNTAGCQ*IWS 146
+ +PC G N +VSP N C WS
Sbjct: 767 YGGAPCPGRNIQVSPCNPTDCPSYWS 792
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 151 IHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 255
+HV+ GG LE GV +V+ TPGR+
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRV 35
>SB_46946| Best HMM Match : RVT_1 (HMM E-Value=0.7)
Length = 367
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 389 SIRSNLFNNLPDLRLEAHVQHSISLIQHQISASAQV--RCLLLQKINSLPGVA 237
S + LF D+ + QH L+ +SA+ + C+LLQ++N+ GVA
Sbjct: 218 STETALFKIANDILINMKSQHVTLLVLLDLSAAFETIDHCILLQRLNTSFGVA 270
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 82 LVLAPTRELAQQIQQVANEFGQSIHVR-NTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 258
+V++PTRELAQQI + + R + A G + +I++ TP RL+
Sbjct: 209 VVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRLV 268
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 260 INSLPGVAITISTPLSRHLPCGPFGAPPKIQ 168
I + PGV PL+ +P PFGA P Q
Sbjct: 1808 IGTFPGVNPAAMGPLATQVPLAPFGAHPAPQ 1838
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,773,393
Number of Sequences: 59808
Number of extensions: 576440
Number of successful extensions: 1313
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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