Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0310
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07586-1|AAB00371.1|  499|Drosophila melanogaster phosphoprotein...    31   1.8  
L07581-1|AAA99870.1|  499|Drosophila melanogaster phosphoprotein...    31   1.8  
AY061152-1|AAL28700.1|  499|Drosophila melanogaster LD12394p pro...    31   1.8  
AE014297-1099|AAN13455.1|  499|Drosophila melanogaster CG6235-PF...    31   1.8  
AE014297-1098|AAF54498.1|  499|Drosophila melanogaster CG6235-PA...    31   1.8  

>L07586-1|AAB00371.1|  499|Drosophila melanogaster phosphoprotein
           phosphatase 2A55 kDa regulatory subunit protein.
          Length = 499

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 301 PRTIPPRTFGRPSSAGVFXNLTSEVVSXXG*XXCVGGVSCYWC 173
           P T+PPRTF R SS     N+ +  ++  G           WC
Sbjct: 24  PPTLPPRTFMRQSSITKIGNMLNTAININGAKKPASNGEASWC 66


>L07581-1|AAA99870.1|  499|Drosophila melanogaster phosphoprotein
           phosphatase 2A55 kDa regulatory subunit protein.
          Length = 499

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 301 PRTIPPRTFGRPSSAGVFXNLTSEVVSXXG*XXCVGGVSCYWC 173
           P T+PPRTF R SS     N+ +  ++  G           WC
Sbjct: 24  PPTLPPRTFMRQSSITKIGNMLNTAININGAKKPASNGEASWC 66


>AY061152-1|AAL28700.1|  499|Drosophila melanogaster LD12394p
           protein.
          Length = 499

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 301 PRTIPPRTFGRPSSAGVFXNLTSEVVSXXG*XXCVGGVSCYWC 173
           P T+PPRTF R SS     N+ +  ++  G           WC
Sbjct: 24  PPTLPPRTFMRQSSITKIGNMLNTAININGAKKPASNGEASWC 66


>AE014297-1099|AAN13455.1|  499|Drosophila melanogaster CG6235-PF,
           isoform F protein.
          Length = 499

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 301 PRTIPPRTFGRPSSAGVFXNLTSEVVSXXG*XXCVGGVSCYWC 173
           P T+PPRTF R SS     N+ +  ++  G           WC
Sbjct: 24  PPTLPPRTFMRQSSITKIGNMLNTAININGAKKPASNGEASWC 66


>AE014297-1098|AAF54498.1|  499|Drosophila melanogaster CG6235-PA,
           isoform A protein.
          Length = 499

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 301 PRTIPPRTFGRPSSAGVFXNLTSEVVSXXG*XXCVGGVSCYWC 173
           P T+PPRTF R SS     N+ +  ++  G           WC
Sbjct: 24  PPTLPPRTFMRQSSITKIGNMLNTAININGAKKPASNGEASWC 66


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,278,878
Number of Sequences: 53049
Number of extensions: 223044
Number of successful extensions: 516
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)