Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0303
         (825 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.   120   4e-29
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.   120   4e-29
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.   120   4e-29
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.   120   4e-29
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    27   0.93 
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         25   2.8  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         25   2.8  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         25   2.8  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   8.6  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  120 bits (290), Expect = 4e-29
 Identities = 68/114 (59%), Positives = 76/114 (66%)
 Frame = +3

Query: 384 HYTEGAELVDFSQRVFF*TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEY 563
           HYTEGAELVD    V       ++       + FQLTHSL G      G LLISKIREEY
Sbjct: 1   HYTEGAELVDAVLDVV-----RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55

Query: 564 PDRIMXTYSVVPSPKVSDTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
           PDRIM TYSVVPSPKVSDTVVEP+NATLS+HQLV ++         +ALYDICF
Sbjct: 56  PDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLV-ENTDETYCIDNEALYDICF 108


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  120 bits (290), Expect = 4e-29
 Identities = 68/114 (59%), Positives = 76/114 (66%)
 Frame = +3

Query: 384 HYTEGAELVDFSQRVFF*TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEY 563
           HYTEGAELVD    V       ++       + FQLTHSL G      G LLISKIREEY
Sbjct: 1   HYTEGAELVDAVLDVV-----RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55

Query: 564 PDRIMXTYSVVPSPKVSDTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
           PDRIM TYSVVPSPKVSDTVVEP+NATLS+HQLV ++         +ALYDICF
Sbjct: 56  PDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLV-ENTDETYCIDNEALYDICF 108


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  120 bits (290), Expect = 4e-29
 Identities = 68/114 (59%), Positives = 76/114 (66%)
 Frame = +3

Query: 384 HYTEGAELVDFSQRVFF*TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEY 563
           HYTEGAELVD    V       ++       + FQLTHSL G      G LLISKIREEY
Sbjct: 1   HYTEGAELVDAVLDVV-----RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55

Query: 564 PDRIMXTYSVVPSPKVSDTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
           PDRIM TYSVVPSPKVSDTVVEP+NATLS+HQLV ++         +ALYDICF
Sbjct: 56  PDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLV-ENTDETYCIDNEALYDICF 108


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  120 bits (290), Expect = 4e-29
 Identities = 68/114 (59%), Positives = 76/114 (66%)
 Frame = +3

Query: 384 HYTEGAELVDFSQRVFF*TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEY 563
           HYTEGAELVD    V       ++       + FQLTHSL G      G LLISKIREEY
Sbjct: 1   HYTEGAELVDAVLDVV-----RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55

Query: 564 PDRIMXTYSVVPSPKVSDTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
           PDRIM TYSVVPSPKVSDTVVEP+NATLS+HQLV ++         +ALYDICF
Sbjct: 56  PDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLV-ENTDETYCIDNEALYDICF 108


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 26.6 bits (56), Expect = 0.93
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 73  MREIVHIQAGQCGNQIGAKFWE 138
           MRE + +  GQ G QIG   W+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 212 SMYTTMKPPAASXXSRHPRRLGARHH 289
           S+YTT+  P+AS   RH     +RHH
Sbjct: 13  SLYTTVSEPSASTKHRH----HSRHH 34


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 212 SMYTTMKPPAASXXSRHPRRLGARHH 289
           S+YTT+  P+AS   RH     +RHH
Sbjct: 13  SLYTTVSEPSASTKHRH----HSRHH 34


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 212 SMYTTMKPPAASXXSRHPRRLGARHH 289
           S+YTT+  P+AS   RH     +RHH
Sbjct: 13  SLYTTVSEPSASTKHRH----HSRHH 34


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = -1

Query: 516 PVPHXASVSVGNPWRQSHDSASFRTTSKKKPFGKNRRAQHPPCSVP 379
           P P   S S+G         A+  T  K+KPF K +    P   VP
Sbjct: 193 PTPGDDSDSMGASRHGKTPLATPPTKEKRKPFFKKQETSSPYDVVP 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,425
Number of Sequences: 2352
Number of extensions: 15989
Number of successful extensions: 57
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)