Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0303
(825 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 201 5e-52
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 200 9e-52
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 200 9e-52
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 200 9e-52
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 200 1e-51
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 200 1e-51
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 199 2e-51
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 197 8e-51
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 197 8e-51
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 103 1e-22
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 103 1e-22
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 103 1e-22
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 103 1e-22
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 103 1e-22
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 103 1e-22
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 102 3e-22
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 73 2e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 73 2e-13
At4g37190.1 68417.m05265 expressed protein 32 0.40
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 2.1
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 29 3.7
At1g61380.1 68414.m06917 S-locus protein kinase, putative simila... 28 6.5
At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to autop... 28 8.7
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 201 bits (490), Expect = 5e-52
Identities = 101/157 (64%), Positives = 115/157 (73%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+L+DLEPGTMDS+RSGPFGQIFRPDNFVF Q GAGNNWAKGHYTEGAEL+D V
Sbjct: 63 RAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV-- 120
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
++ + FQ+ HSL G G LLISKIREEYPDR+M T+SV PSPKVS
Sbjct: 121 ---VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 177
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
DTVVEP+NATLSVHQLV ++ +ALYDICF
Sbjct: 178 DTVVEPYNATLSVHQLVENADECMVLD-NEALYDICF 213
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/61 (72%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGD-SDLQLERINVYYNEASXGKX 249
MREI+HIQ GQCGNQIG+KFWE+I D GI G Y GD +DLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 250 V 252
V
Sbjct: 61 V 61
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 200 bits (488), Expect = 9e-52
Identities = 101/157 (64%), Positives = 115/157 (73%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+L+DLEPGTMDSVRSGP+GQIFRPDNFVF Q GAGNNWAKGHYTEGAEL+D V
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV-- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
++ + FQ+ HSL G G LLISKIREEYPDR+M T+SV PSPKVS
Sbjct: 120 ---VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
DTVVEP+NATLSVHQLV ++ +ALYDICF
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLD-NEALYDICF 212
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQLERINVYYNEASXGKXV 252
MREI+HIQ GQCGNQIGAKFWE++ GI G Y G++DLQLER+NVYYNEAS G+ V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 200 bits (488), Expect = 9e-52
Identities = 101/157 (64%), Positives = 115/157 (73%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+L+DLEPGTMDS+RSGPFGQIFRPDNFVF Q GAGNNWAKGHYTEGAEL+D V
Sbjct: 62 RAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV-- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
++ + FQ+ HSL G G LLISKIREEYPDR+M T+SV PSPKVS
Sbjct: 120 ---VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVS 176
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
DTVVEP+NATLSVHQLV ++ +ALYDICF
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLD-NEALYDICF 212
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/60 (71%), Positives = 47/60 (78%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQLERINVYYNEASXGKXV 252
MREI+HIQ GQCGNQIGAKFWE+I GI G GD+DLQLERINVY+NEAS GK V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 200 bits (488), Expect = 9e-52
Identities = 101/157 (64%), Positives = 115/157 (73%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+L+DLEPGTMDSVRSGP+GQIFRPDNFVF Q GAGNNWAKGHYTEGAEL+D V
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV-- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
++ + FQ+ HSL G G LLISKIREEYPDR+M T+SV PSPKVS
Sbjct: 120 ---VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVS 176
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
DTVVEP+NATLSVHQLV ++ +ALYDICF
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLD-NEALYDICF 212
Score = 95.1 bits (226), Expect = 5e-20
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQLERINVYYNEASXGKXV 252
MREI+HIQ GQCGNQIG+KFWE+++ GI G Y GDS+LQLER+NVYYNEAS G+ V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 200 bits (487), Expect = 1e-51
Identities = 101/157 (64%), Positives = 115/157 (73%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+L+DLEPGTMDS+RSGPFGQIFRPDNFVF Q GAGNNWAKGHYTEGAEL+D V
Sbjct: 62 RAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV-- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
++ + FQ+ HSL G G LLISKIREEYPDR+M T+SV PSPKVS
Sbjct: 120 ---VRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVS 176
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
DTVVEP+NATLSVHQLV ++ +ALYDICF
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLD-NEALYDICF 212
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/60 (73%), Positives = 48/60 (80%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQLERINVYYNEASXGKXV 252
MREI+HIQ GQCGNQIGAKFWE+I D GI G Y GDS LQLERI+VY+NEAS GK V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 200 bits (487), Expect = 1e-51
Identities = 100/157 (63%), Positives = 115/157 (73%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+L+DLEPGTMDS+RSGP+GQIFRPDNFVF Q GAGNNWAKGHYTEGAEL+D V
Sbjct: 63 RAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV-- 120
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
++ + FQ+ HSL G G LLISKIREEYPDR+M T+SV PSPKVS
Sbjct: 121 ---VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 177
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
DTVVEP+NATLSVHQLV ++ +ALYDICF
Sbjct: 178 DTVVEPYNATLSVHQLVENADECMVLD-NEALYDICF 213
Score = 100 bits (239), Expect = 1e-21
Identities = 44/61 (72%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDS-DLQLERINVYYNEASXGKX 249
MREI+H+Q GQCGNQIG+KFWE+I D G+ P G Y+GDS DLQLERINVYYNEAS G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 250 V 252
V
Sbjct: 61 V 61
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 199 bits (486), Expect = 2e-51
Identities = 101/157 (64%), Positives = 115/157 (73%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RAIL+DLEPGTMDSVR+GP+GQIFRPDNFVF Q GAGNNWAKGHYTEGAEL+D V
Sbjct: 62 RAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV-- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
++ + FQ+ HSL G G LLISKIREEYPDR+M T+SV PSPKVS
Sbjct: 120 ---VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
DTVVEP+NATLSVHQLV ++ +ALYDICF
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLD-NEALYDICF 212
Score = 101 bits (241), Expect = 8e-22
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQLERINVYYNEASXGKXV 252
MREI+HIQ GQCGNQIG+KFWE++ D GI P G Y G+SDLQLER+NVYYNEAS G+ V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 197 bits (480), Expect = 8e-51
Identities = 99/157 (63%), Positives = 114/157 (72%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+L+DLEPGTMDS+RSGP+GQ FRPDNFVF Q GAGNNWAKGHYTEGAEL+D V
Sbjct: 62 RAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV-- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
++ + FQ+ HSL G G LLISKIREEYPDR+M T+SV PSPKVS
Sbjct: 120 ---VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
DTVVEP+NATLSVHQLV ++ +ALYDICF
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLD-NEALYDICF 212
Score = 101 bits (243), Expect = 4e-22
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQLERINVYYNEASXGKXV 252
MREI+HIQ GQCGNQIGAKFWE++ GI P G Y GDSDLQLERINVYYNEAS G+ V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 197 bits (480), Expect = 8e-51
Identities = 99/157 (63%), Positives = 114/157 (72%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+L+DLEPGTMDS+RSGP+GQ FRPDNFVF Q GAGNNWAKGHYTEGAEL+D V
Sbjct: 62 RAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV-- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
++ + FQ+ HSL G G LLISKIREEYPDR+M T+SV PSPKVS
Sbjct: 120 ---VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDICF 725
DTVVEP+NATLSVHQLV ++ +ALYDICF
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLD-NEALYDICF 212
Score = 101 bits (243), Expect = 4e-22
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQLERINVYYNEASXGKXV 252
MREI+HIQ GQCGNQIGAKFWE++ GI P G Y GDSDLQLERINVYYNEAS G+ V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 103 bits (248), Expect = 1e-22
Identities = 53/156 (33%), Positives = 87/156 (55%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL---- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
+ + + F + +++ G G LL+ ++ +Y + ++V PSP+VS
Sbjct: 120 -DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDIC 722
+VVEP+N+ LS H L+ +H + +A+YDIC
Sbjct: 179 TSVVEPYNSVLSTHSLL-EHTDVSILLDNEAIYDIC 213
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDL--QLERINVYYNEASXGK 246
MRE + I GQ G Q+G WE+ GI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 XV 252
V
Sbjct: 61 HV 62
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 103 bits (248), Expect = 1e-22
Identities = 53/156 (33%), Positives = 87/156 (55%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL---- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
+ + + F + +++ G G LL+ ++ +Y + ++V PSP+VS
Sbjct: 120 -DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDIC 722
+VVEP+N+ LS H L+ +H + +A+YDIC
Sbjct: 179 TSVVEPYNSVLSTHSLL-EHTDVSILLDNEAIYDIC 213
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDL--QLERINVYYNEASXGK 246
MRE + I GQ G Q+G WE+ GI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 XV 252
V
Sbjct: 61 HV 62
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 103 bits (248), Expect = 1e-22
Identities = 53/156 (33%), Positives = 87/156 (55%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL---- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
+ + + F + +++ G G LL+ ++ +Y + ++V PSP+VS
Sbjct: 120 -DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDIC 722
+VVEP+N+ LS H L+ +H + +A+YDIC
Sbjct: 179 TSVVEPYNSVLSTHSLL-EHTDVSILLDNEAIYDIC 213
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDL--QLERINVYYNEASXGK 246
MRE + I GQ G Q+G WE+ GI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 XV 252
V
Sbjct: 61 HV 62
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 103 bits (248), Expect = 1e-22
Identities = 53/156 (33%), Positives = 87/156 (55%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL---- 119
Query: 435 *TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKVS 614
+ + + F + +++ G G LL+ ++ +Y + ++V PSP+VS
Sbjct: 120 -DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 178
Query: 615 DTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDIC 722
+VVEP+N+ LS H L+ +H + +A+YDIC
Sbjct: 179 TSVVEPYNSVLSTHSLL-EHTDVSILLDNEAIYDIC 213
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDL--QLERINVYYNEASXGK 246
MRE + I GQ G Q+G WE+ GI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 XV 252
V
Sbjct: 61 HV 62
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 103 bits (247), Expect = 1e-22
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFS-QRVF 431
RA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD RV
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV- 122
Query: 432 F*TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKV 611
+ + + F + +++ G G LL+ ++ +Y + +++ PSP+V
Sbjct: 123 -----RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV 177
Query: 612 SDTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDIC 722
S VVEP+N+ LS H L+ +H + +A+YDIC
Sbjct: 178 STAVVEPYNSVLSTHSLL-EHTDVAVLLDNEAIYDIC 213
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQL--ERINVYYNEASXGK 246
MREI+ I GQ G Q+G WE+ GI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 247 XV 252
V
Sbjct: 61 HV 62
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 103 bits (247), Expect = 1e-22
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFS-QRVF 431
RA+ VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD RV
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV- 122
Query: 432 F*TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSPKV 611
+ + + F + +++ G G LL+ ++ +Y + +++ PSP+V
Sbjct: 123 -----RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV 177
Query: 612 SDTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDIC 722
S VVEP+N+ LS H L+ +H + +A+YDIC
Sbjct: 178 STAVVEPYNSVLSTHSLL-EHTDVAVLLDNEAIYDIC 213
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQL--ERINVYYNEASXGK 246
MREI+ I GQ G Q+G WE+ GI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 247 XV 252
V
Sbjct: 61 HV 62
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 102 bits (244), Expect = 3e-22
Identities = 54/159 (33%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQXGAGNNWAKGHYTEGAELVDFSQRVFF 434
RA+ +DLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD
Sbjct: 64 RAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVD------- 116
Query: 435 *TSFERKR---NRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSP 605
T ER R + + F + +++ G G LL+ ++ ++ + +++ PSP
Sbjct: 117 -TCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSP 175
Query: 606 KVSDTVVEPHNATLSVHQLVGKHRRXLLFSTTKALYDIC 722
+VS VVEP+N+ LS H L+ +H ++ +A+YDIC
Sbjct: 176 QVSTAVVEPYNSVLSTHSLL-EHTDVVVLLDNEAIYDIC 213
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQL--ERINVYYNEASXGK 246
MREI+ I GQ G Q+G WE+ GI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 247 XV 252
V
Sbjct: 61 HV 62
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.9 bits (171), Expect = 2e-13
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFXQ--XGAGNNWAKG-HYTEGAELVDFSQR 425
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G H +G E +
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQGKGVE-----EE 117
Query: 426 VFF*TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSP 605
+ +R+ + + F L HS+ G G L+ + + Y +++ TYSV P+
Sbjct: 118 IM--DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQ 175
Query: 606 -KVSDTVVEPHNATLSVHQL 662
+ SD VV+P+N+ L++ +L
Sbjct: 176 METSDVVVQPYNSLLTLKRL 195
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 76 REIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQLERINVYYNEA 234
REI+ +Q GQCGNQIG +FW+ + GI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Frame = +3
Query: 255 RAILVDLEPGTMDSVRSGPFGQIFRPDN-FVFXQ-XGAGNNWAKG-HYTEGAELVDFSQR 425
RA+L+DLEP ++ +++G + ++ +N FV GAGNNWA G H +G E +
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQGKGVE-----EE 117
Query: 426 VFF*TSFERKRNRVIASRDFQLTHSLXGAPVPVXGXLLISKIREEYPDRIMXTYSVVPSP 605
+ +R+ + + F L HS+ G G L+ + + Y +++ TYSV P+
Sbjct: 118 IM--DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQ 175
Query: 606 -KVSDTVVEPHNATLSVHQL 662
+ SD VV+P+N+ L++ +L
Sbjct: 176 METSDVVVQPYNSLLTLKRL 195
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 76 REIVHIQAGQCGNQIGAKFWEIISDXXGIXPXGAYHGDSDLQLERINVYYNEA 234
REI+ +Q GQCGNQIG +FW+ + GI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 73 MREIVHIQAGQCGNQIGAKFWEIISDXXGI 162
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2
Query: 440 VVRKEAESCDCLQGF 484
VVRKEAE+C+CLQ F
Sbjct: 7 VVRKEAENCNCLQVF 21
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 231 FIVVYIDALQLQVRVPMVGTXGVDAXXVGDDLPELSSDLVAAL------TSLDMYDFPHF 70
F++V+ L Q V +GT GV+ + D+LP S D VA L + +YD H
Sbjct: 24 FLLVF-SILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATLLKSAKIRNTRIYDADHS 80
Query: 69 VL 64
VL
Sbjct: 81 VL 82
>At1g61380.1 68414.m06917 S-locus protein kinase, putative similar
to KI domain interacting kinase 1 [Zea mays]
gi|2735017|gb|AAB93834; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 805
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 443 VRKEAESCDCLQGFPTDTLAXWGTGS 520
VR + C+CL+GF + WG G+
Sbjct: 294 VRSDPPKCECLKGFVPKSDEEWGKGN 319
>At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to
autophagy 8a [Arabidopsis thaliana] GI:19912151;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 543 SKIREEYPDRIMXTYSVVPSPKVSDTVVEPH--NATLSVHQLVGKHRRXLLFSTTKALY 713
S+IRE+YPDRI V D + + A L+V Q V R+ + KA++
Sbjct: 20 SRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIF 78
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,057,855
Number of Sequences: 28952
Number of extensions: 327892
Number of successful extensions: 827
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -