Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0301
(749 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 167 3e-40
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 48 2e-04
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 48 3e-04
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 48 3e-04
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 44 0.005
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 39 0.15
UniRef50_A7TCP1 Cluster: Predicted protein; n=4; Nematostella ve... 39 0.15
UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-direct... 38 0.26
UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Re... 37 0.46
UniRef50_A3TKA7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 33 5.7
UniRef50_A7T2B1 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.7
UniRef50_A4B3A9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_Q754T0 Cluster: AFL009Cp; n=1; Eremothecium gossypii|Re... 33 9.9
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 167 bits (406), Expect = 3e-40
Identities = 80/91 (87%), Positives = 85/91 (93%), Gaps = 1/91 (1%)
Frame = +1
Query: 4 SARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD 183
+ARGGGTVIYYRRALHC+PLDPPAL NIEASVCRISLTGHAPIVIASVYLPP+KIVLSSD
Sbjct: 69 TARGGGTVIYYRRALHCIPLDPPALVNIEASVCRISLTGHAPIVIASVYLPPEKIVLSSD 128
Query: 184 IEALLGIGSSVILAGDLNCKHIR-*THTPQP 273
IEALL +GSSVILAGDLNCKHIR +HT P
Sbjct: 129 IEALLSMGSSVILAGDLNCKHIRWNSHTTTP 159
Score = 110 bits (264), Expect = 4e-23
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 255 NSHTTTPNGRRLDALVDNLAFDIVAPLIPTHYPLNIAHRPDILDIALLKNVTL 413
NSHTTTPNGRRLDALVD+LAFDI+APL PTHYPLNIAHRPDILDIALLKNVTL
Sbjct: 153 NSHTTTPNGRRLDALVDDLAFDIIAPLTPTHYPLNIAHRPDILDIALLKNVTL 205
Score = 42.7 bits (96), Expect = 0.009
Identities = 34/77 (44%), Positives = 36/77 (46%)
Frame = +1
Query: 436 HSIEVVSELDSDQPXXXXXXXXXXXXVPVTRXCXGXXTRWGSAXAESDSNHRLPFSPXF* 615
HSIEVVSELDSD VPVTR T G + AESD LPFSP
Sbjct: 208 HSIEVVSELDSDHRPVVMKLGRSPDSVPVTRTVVDWHT-LGISLAESDP-PSLPFSPDS- 264
Query: 616 XRLPQDTGXSXRHL*RH 666
PQDT + L H
Sbjct: 265 TPSPQDTAEAIDILTSH 281
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 GSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLS 177
G++RGG VI R H PL P ++ + + R+ L T + +A+VYLPP + +
Sbjct: 63 GNSRGGSAVIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIV 119
Query: 178 SDIEALLG-IGSSVILAGDLNCKH 246
D +++ +G+ I GD N KH
Sbjct: 120 DDFKSMFAALGNKFIAGGDYNAKH 143
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +1
Query: 1 GSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSS 180
G GGGT I+ + L P L N+EA ++ T + P+ + + Y P +L
Sbjct: 187 GIGPGGGTAIFVSNRIKHSVLATPDLRNMEAVGINVA-TANGPLRLFACYNRPQIPILEE 245
Query: 181 DIEALLGIGSSVILAGDLNCKHI 249
D++ L + I AGD N KHI
Sbjct: 246 DLQTLFDGNTPTIAAGDFNAKHI 268
Score = 34.3 bits (75), Expect = 3.3
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 SHTTTPNGRRLDALVD-NLAFDIVAPLIPTHYPLNIAHRPDILDIALLKNV 407
S + NG L+ D +L ++AP+ PT Y N DILD+A++KNV
Sbjct: 272 SRRSNRNGNILNGFTDQHLDISVMAPVEPTFYR-NSDGTADILDVAIVKNV 321
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +1
Query: 1 GSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSS 180
G GGGT I+ + L P L N+EA ++ T + P+ + + Y P +L
Sbjct: 544 GIGPGGGTAIFVSNRIKHSVLATPDLRNMEAVGINVA-TANGPLRLFACYNRPQIPILEE 602
Query: 181 DIEALLGIGSSVILAGDLNCKHI 249
D++ L + I AGD N KHI
Sbjct: 603 DLQTLFDGNTPTIAAGDFNAKHI 625
Score = 36.3 bits (80), Expect = 0.81
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 SHTTTPNGRRLDALVD-NLAFDIVAPLIPTHYPLNIAHRPDILDIALLKNV 407
S + NG L+ D NL ++AP+ PT Y N DILD+A++KNV
Sbjct: 629 SRRSNRNGNFLNGFTDQNLDISVMAPVEPTFYR-NSDGAADILDVAIVKNV 678
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 321 IVAPLIPTHYPLNIAHRPDILDIALLKNVTL 413
I PL+PTH+P H PDILDI L KN+TL
Sbjct: 508 IEPPLVPTHFPGCATHDPDILDIFLTKNITL 538
Score = 39.1 bits (87), Expect = 0.11
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = +1
Query: 7 ARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDI 186
A GGG I RR + ++ + EA I T PI + + Y PP+ S +
Sbjct: 405 AAGGGVAILIRRNIRHRAINTD-FPDCEAVGVEIH-TKSTPIRVIAFYAPPNPKEKFSSL 462
Query: 187 EALLGIGSSVILAGDLNCKH 246
+L ILAGDLN KH
Sbjct: 463 HSLFNTNIPTILAGDLNAKH 482
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 38.7 bits (86), Expect = 0.15
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 67 PPALANIEASV-CR-ISLTGHAPIVIASVYLPPDKIVLSSDI-EALLGIGSSVILAGDLN 237
P NI +S+ C + L I I + Y+PP +I SSDI E L + S IL GDLN
Sbjct: 78 PHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLNGSTILLGDLN 137
>UniRef50_A7TCP1 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 412
Score = 38.7 bits (86), Expect = 0.15
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 255 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 314
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 315 LIKAVDDEDKEHVILGDLNC 334
>UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 894
Score = 37.9 bits (84), Expect = 0.26
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +1
Query: 40 RALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGIGSSVI 219
R H V L P L N EA ++ T + P+ + + Y P +L D++ L + I
Sbjct: 371 RVKHSV-LAAPDLRNREAVSINVA-TANGPLRLFACYNRPQIPILEEDLQTLFDGNTLTI 428
Query: 220 LAGDLNCKHI 249
AGD N KHI
Sbjct: 429 AAGDFNAKHI 438
Score = 34.3 bits (75), Expect = 3.3
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 SHTTTPNGRRLDALVD-NLAFDIVAPLIPTHYPLNIAHRPDILDIALLKNV 407
S + NG L+ D +L ++AP+ PT Y N DILD+A++KNV
Sbjct: 442 SRRSNRNGNILNGFTDQHLDISVLAPVEPTFYR-NSDGAADILDVAIVKNV 491
>UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Rep:
Pol protein - Drosophila virilis (Fruit fly)
Length = 891
Score = 37.1 bits (82), Expect = 0.46
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 16 GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEAL 195
GG I + L +L ++ ++ R+ T IAS Y PP+ VL+ D L
Sbjct: 66 GGAAILISNHIEYQALPGISLPQLQCAIVRLR-TDLGGANIASCYWPPNHAVLADDYVCL 124
Query: 196 LG-IGSSVILAGDLNCKH 246
+G + ++ GD N KH
Sbjct: 125 FNQLGENFLIGGDWNAKH 142
>UniRef50_A3TKA7 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 225
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +1
Query: 94 SVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALL---GIGSSVILAGDLN 237
+V R++ G P+ +ASV+L D ++ + +L +G VILAGDLN
Sbjct: 99 AVARVAAPGCEPVAVASVHLSLDAHERAAHAQVILQTINVGGEVILAGDLN 149
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 33.5 bits (73), Expect = 5.7
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 258 SHTTTPNGRRL-DALVD-NLAFDIVAPLIPTHYPLNIAHRPDILDIALLKNV 407
S TP G++L +AL D V+P PT++P + PD++D A+ K+V
Sbjct: 146 SRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLIDFAITKHV 197
>UniRef50_A7T2B1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 445
Score = 33.5 bits (73), Expect = 5.7
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 16 GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEAL 195
GG +Y R +++ + ++EA I+ P ++ +Y P I +D+E L
Sbjct: 190 GGVCLYLRSSINYCIRNDLVPDSVEAVCVEITKPHSRPFFVSIIYRPESPIDYFNDLEQL 249
Query: 196 L----GIGSSVILAGDLNC 240
+ + ++ GDLNC
Sbjct: 250 IKAVDDVNKEHVMLGDLNC 268
>UniRef50_A4B3A9 Cluster: Putative uncharacterized protein; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Putative
uncharacterized protein - Alteromonas macleodii 'Deep
ecotype'
Length = 309
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 118 GHAPIVIASVYLPPDKIVLSSDIEALLGIGSSVIL 222
G +V A LPPDKIVL S + ++G SSV+L
Sbjct: 235 GFGLMVAAGPKLPPDKIVLISTLTPIVGYVSSVLL 269
>UniRef50_Q754T0 Cluster: AFL009Cp; n=1; Eremothecium gossypii|Rep:
AFL009Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 413
Score = 32.7 bits (71), Expect = 9.9
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 76 LANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGIGSS 213
L N E S CR SL GH+ + + Y P K++LS+ I+ L I S+
Sbjct: 131 LHNAEFSDCR-SLDGHSGHITSLHYFPSGKVLLSASIDMQLKIWSA 175
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,182,624
Number of Sequences: 1657284
Number of extensions: 11802584
Number of successful extensions: 23639
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23630
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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