Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0301
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13) 39 0.005
SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_1162| Best HMM Match : Exo_endo_phos (HMM E-Value=5.3e-08) 39 0.005
SB_51484| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0036) 39 0.005
SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0) 39 0.005
SB_30214| Best HMM Match : Exo_endo_phos (HMM E-Value=6.1e-11) 39 0.005
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) 39 0.005
SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08) 36 0.046
SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05) 36 0.046
SB_53389| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10) 35 0.061
SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08) 35 0.081
SB_6629| Best HMM Match : Lipase_GDSL (HMM E-Value=2.2) 34 0.11
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_21186| Best HMM Match : Ornatin (HMM E-Value=6.1) 33 0.25
SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32) 30 2.3
SB_58999| Best HMM Match : Exo_endo_phos (HMM E-Value=2.6) 30 2.3
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_39138| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_30116| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_45653| Best HMM Match : zf-GRF (HMM E-Value=5.3e-16) 29 5.3
SB_14358| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11) 28 9.3
SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027) 28 9.3
SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10) 28 9.3
SB_6691| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0031) 28 9.3
>SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)
Length = 851
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 411 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 470
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 471 LIKAVDDEDKEHVILGDLNC 490
>SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 60 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 119
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 120 LIKAVDDEDKEHVILGDLNC 139
>SB_1162| Best HMM Match : Exo_endo_phos (HMM E-Value=5.3e-08)
Length = 285
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 139 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 198
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 199 LIKAVDDEDKEHVILGDLNC 218
>SB_51484| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0036)
Length = 283
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 32 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 91
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 92 LIKAVDDEDKEHVILGDLNC 111
>SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 940
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 60 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 119
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 120 LIKAVDDEDKEHVILGDLNC 139
>SB_30214| Best HMM Match : Exo_endo_phos (HMM E-Value=6.1e-11)
Length = 509
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 352 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 411
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 412 LIKAVDDEDKEHVILGDLNC 431
>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1821
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 545 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 604
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 605 LIKAVDDEDKEHVILGDLNC 624
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 1006 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 1065
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 1066 LIKAVDDEDKEHVILGDLNC 1085
>SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 257 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 316
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 317 LIKAVDDEDKEHVILGDLNC 336
>SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08)
Length = 993
Score = 35.5 bits (78), Expect = 0.046
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 13 GGGTVIYYRRAL-HCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIE 189
GGG +Y R ++ +C+ P ++EA I+ P ++ +Y P I +D+E
Sbjct: 523 GGGVCLYLRSSINYCIRNLVPD--SVEAVCVEITKPHSRPFFVSIIYRPESPIDYFNDLE 580
Query: 190 ALL----GIGSSVILAGDLNC 240
L+ + ++ GDLNC
Sbjct: 581 QLIKAVDDVNKEHVILGDLNC 601
>SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05)
Length = 670
Score = 35.5 bits (78), Expect = 0.046
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 13 GGGTVIYYRRAL-HCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIE 189
GGG +Y R ++ +C+ P ++EA I+ P ++ +Y P I +D+E
Sbjct: 404 GGGVCLYLRSSINYCIRNLVPD--SVEAVCVEITKPHSRPFFVSIIYRPESPIDYFNDLE 461
Query: 190 ALL----GIGSSVILAGDLNC 240
L+ + ++ GDLNC
Sbjct: 462 QLIKAVDDVNKEHVILGDLNC 482
>SB_53389| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10)
Length = 774
Score = 35.1 bits (77), Expect = 0.061
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ V P I + E
Sbjct: 340 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVSRPESPIEYFNRFEE 399
Query: 193 LLGI----GSSVILAGDLNC 240
L+ ++ GDLNC
Sbjct: 400 LIKAVDDEDKEHVILGDLNC 419
>SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08)
Length = 696
Score = 34.7 bits (76), Expect = 0.081
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++ + ++EA I+ P ++ +Y P I +D+E
Sbjct: 490 GGGVCLYLRSSINYCIRNDRVPDSVEAVCVEITKPHSRPFFVSIIYRPESPIDYFNDLEQ 549
Query: 193 LL----GIGSSVILAGDLNC 240
L+ + ++ GD NC
Sbjct: 550 LIKAVDDVNKEHVILGDFNC 569
>SB_6629| Best HMM Match : Lipase_GDSL (HMM E-Value=2.2)
Length = 215
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEA 192
GGG +Y R +++CV ++EA I P +++ VY P I + E
Sbjct: 144 GGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPIEYFNRFEE 203
Query: 193 LL 198
L+
Sbjct: 204 LI 205
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 16 GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEAL 195
GG +Y R +++ + ++EA I+ P ++ +Y P I +D+E L
Sbjct: 260 GGVCLYLRSSINYCIRNDLVPDSVEAVCVEITKPHSRPFFVSIIYRPESPIDYFNDLEQL 319
Query: 196 L----GIGSSVILAGDLNC 240
+ + ++ GDLNC
Sbjct: 320 IKAVDDVNKEHVMLGDLNC 338
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPP---DKIVLSSD 183
GGG I R L +L E + L + I+S Y PP D + L D
Sbjct: 1110 GGGVFIAVREDLTAAEERGLSLDGCEVITASVQLVKRKKLFISSFYRPPTDRDALDLLDD 1169
Query: 184 IEALLGIGS----SVILAGDLNCKHI 249
+ L ++IL GD NC I
Sbjct: 1170 YLSKLYSKCPRFPNIILGGDFNCSGI 1195
>SB_21186| Best HMM Match : Ornatin (HMM E-Value=6.1)
Length = 117
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 4 SARGGGT--VIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS 177
+ARGG +I ++R HC ++PPA ++I RIS+ + + ++ V LS
Sbjct: 41 TARGGQATAIIIHQRITHCDTINPPATSSI-----RISIASFSELKLSRVAFAYQNEFLS 95
Query: 178 SDIEALLGIGSSV 216
S I L+ + +S+
Sbjct: 96 SCIPPLIPLQASI 108
>SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32)
Length = 373
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 227 PARMTELPM--PSSASISLLRTILSGGR*TDAITIGACPVSEIRHTD 93
PAR P P+S ++S + I SG DA+ +G C V E+ D
Sbjct: 59 PARAAREPACGPTSGAVSTWKVISSGSSALDAVEVG-CSVCEVEQCD 104
>SB_58999| Best HMM Match : Exo_endo_phos (HMM E-Value=2.6)
Length = 509
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYL-PPDKIVLSSDIE 189
GGG + R L + + E C I L + S Y PPD+ LS +
Sbjct: 25 GGGVFVAVRNDLTAAEERGVDVDSCEIITCSIQLVKRKKLFFTSFYRPPPDEDALSLLND 84
Query: 190 ALLGIGS------SVILAGDLNC 240
L + S SVIL GD NC
Sbjct: 85 HLCKLYSKHTQLPSVILGGDFNC 107
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYL-PPDKIVLSSDIE 189
GGG + R L + + E C I L + S Y PPD+ LS +
Sbjct: 201 GGGVFVAVRNDLTAAEERDVDVDSCEIITCSIQLVKRKKLFFTSFYRPPPDEDALSLLND 260
Query: 190 ALLGIGSS------VILAGDLNCKHI 249
L + S VIL GD NC I
Sbjct: 261 HLCKLYSKHTQLSCVILGGDFNCPGI 286
>SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 82 NIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGI 204
++ + CR +L GHA V + V+LP +L+S + L +
Sbjct: 273 DLNSERCRYTLRGHADSVNSIVFLPYSNTLLTSSADKTLSL 313
>SB_39138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Frame = +1
Query: 16 GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPP--------DKIV 171
GG +Y R + D + + E I+L ++ +VY P D +V
Sbjct: 362 GGVAVYAREDMSVTRRDDLEVTSAEVLWLEITLPKSGSFLVGTVYRPDRTSNYYDGDFMV 421
Query: 172 -LSSDIEALLGIGSSVILAGDLNC 240
L+ ++++ G VIL GD NC
Sbjct: 422 KLNYMLDSVSAQGQEVILCGDFNC 445
>SB_30116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +1
Query: 1 GSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSS 180
G GGG I R + + E+ C+I+ T ++ +ASVY PPD I
Sbjct: 64 GMRMGGGVAIICRNNWKIEVIK--VTDDFESIWCKIT-TPNSVYYVASVYHPPDPIYEPK 120
Query: 181 DIEALLGIGSSVILAGDLNCK 243
D+ L +L D + K
Sbjct: 121 DLLDFLSDTCDEVLLADPDAK 141
>SB_45653| Best HMM Match : zf-GRF (HMM E-Value=5.3e-16)
Length = 470
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 169 VLSSDIEALLGIGSSVILAGDLNCKH 246
+LS ++ALL G VI+ GD+N H
Sbjct: 157 LLSKRVKALLNSGKHVIVLGDINAAH 182
>SB_14358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 318 DIVAPLIPTHYPLNIAHRPDILDIALLKNVTLXGPFFLKTLDR 446
+++ PL+ H L I + +LD+ L++V + P F+K +
Sbjct: 160 NLITPLVCVHVHLIIPNMITLLDLPDLEDVDVTDPLFVKNFTK 202
>SB_58023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Frame = +1
Query: 16 GGTVIYYRRALHCVPLDPPALANIEASVCR-ISLTGHAPIVIASVYLPPDKIV-----LS 177
GG ++Y A+ L ++ E + I + PI+IA VY PD L
Sbjct: 230 GGVMMYVSHAMAYTRLPTLESSDTELLCTQVIPCKSNCPIIIAGVYRVPDSTAEMDAKLE 289
Query: 178 SDIEALLGIGSSVILAGDLNCKHIR 252
IE + +L GD N ++
Sbjct: 290 GLIEKIYIANKEALLLGDFNINFLK 314
>SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11)
Length = 1068
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 4 SARGGGTVIYYRRALHCVP--LDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS 177
+ + GT + YR H +D P N + + +S+TG + V ++ V S
Sbjct: 627 TVQAAGTKVIYRHEDHYYQDTIDIPGPTNAQLGLFMVSVTGSSQPVNWKYFIAGKTSVSS 686
Query: 178 SDIEALLGIGSS 213
SD++ +G S+
Sbjct: 687 SDVQWKIGSWSA 698
>SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 893
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Frame = +1
Query: 16 GGTVIYYRRALHCVPLDPPALANIEASVCR-ISLTGHAPIVIASVYLPPDKIV-----LS 177
GG ++Y A+ L ++ E + I + PI+IA VY PD L
Sbjct: 183 GGVMMYVSHAMAYTRLPTLESSDTELLCTQVIPCKSNCPIIIAGVYRVPDSTAEMDAKLE 242
Query: 178 SDIEALLGIGSSVILAGDLNCKHIR 252
IE + +L GD N ++
Sbjct: 243 GLIEKMYITNKEALLLGDFNINFLK 267
>SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027)
Length = 381
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Frame = +1
Query: 16 GGTVIYYRRALHCVPLDPPALANIEASVCR-ISLTGHAPIVIASVYLPPDKIV-----LS 177
GG ++Y A+ L ++ E + I + PI+IA VY PD L
Sbjct: 35 GGVMMYVSHAMAYTRLPTLESSDTELLCTQVIPCKSNCPIIIAGVYRVPDSTAEMDAKLE 94
Query: 178 SDIEALLGIGSSVILAGDLNCKHIR 252
IE + +L GD N ++
Sbjct: 95 GLIEKIYITNKEALLLGDFNINFLK 119
>SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10)
Length = 734
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Frame = +1
Query: 16 GGTVIYYRRALHCVPLDPPALANIEASVCR-ISLTGHAPIVIASVYLPPDKIV-----LS 177
GG ++Y A+ L ++ E + I + PI+IA VY PD L
Sbjct: 451 GGVMMYVSHAMAYTRLPTLESSDTELLCTQVIPCKSNCPIIIAGVYRVPDSTAEMDAKLE 510
Query: 178 SDIEALLGIGSSVILAGDLNCKHIR 252
IE + +L GD N ++
Sbjct: 511 GLIEKIYITNKEALLLGDFNINFLK 535
>SB_6691| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0031)
Length = 753
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Frame = +1
Query: 13 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPP---DKIVLSSD 183
GGG I R L +L E + L + I+S Y PP D + L D
Sbjct: 288 GGGVFIAVREDLTAAEERGLSLDGCEVITASVQLVKRKKLFISSFYRPPTDRDALDLLDD 347
Query: 184 IEALLGIGS----SVILAGDLNCKHI 249
+ L ++IL GD NC I
Sbjct: 348 YLSKLYSKCPRFPNIILGGDFNCSGI 373
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,776,328
Number of Sequences: 59808
Number of extensions: 368533
Number of successful extensions: 780
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -