Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0298
         (385 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q74BS5 Cluster: Conserved domain protein; n=1; Geobacte...    31   5.7  
UniRef50_Q537Y4 Cluster: ORF2; n=8; unclassified Anellovirus|Rep...    31   7.5  
UniRef50_UPI0000498602 Cluster: hypothetical protein 145.t00003;...    31   9.9  
UniRef50_A7BL13 Cluster: Putative uncharacterized protein; n=1; ...    31   9.9  
UniRef50_A2QF58 Cluster: Similarity; n=3; Trichocomaceae|Rep: Si...    31   9.9  

>UniRef50_Q74BS5 Cluster: Conserved domain protein; n=1; Geobacter
           sulfurreducens|Rep: Conserved domain protein - Geobacter
           sulfurreducens
          Length = 356

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 310 SIWHSLRNCVAYQAGVWQNLITKGI 384
           ++ H LRNC  Y+AGVW++++   I
Sbjct: 322 TLLHMLRNCGKYRAGVWRSMLEGAI 346


>UniRef50_Q537Y4 Cluster: ORF2; n=8; unclassified Anellovirus|Rep:
           ORF2 - Small anellovirus 1
          Length = 626

 Score = 31.1 bits (67), Expect = 7.5
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
 Frame = +3

Query: 48  LKQKKTTKPPNRTVSSCIF------CDVXAAEAVRSRINWNKRSICGENRVWECHALSVK 209
           LK+KKT KPP + +S   F       D+    A    + + +   C ENR+   + L+ +
Sbjct: 203 LKKKKTIKPPKQMLSKWFFQQQFAKYDLVLIAAAACSLRYPRIGCCNENRMITLYCLNTR 262

Query: 210 VARRT-YLATRHVPH 251
             + T + AT+  P+
Sbjct: 263 FYQDTEWGATKQHPN 277


>UniRef50_UPI0000498602 Cluster: hypothetical protein 145.t00003;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 145.t00003 - Entamoeba histolytica HM-1:IMSS
          Length = 535

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +2

Query: 26  RPVRLTRSKTKENNETAQQNRQQLYIL*RXRGGSGQVSYKLEQALNLWGESSMG 187
           R +R TR+K  E +E   + R++ Y     R G  Q   K+E    LW  + MG
Sbjct: 6   RELRKTRTKQMEESEKIIEVRERKY---GKRKGQNQKKIKIENIYKLWEGNGMG 56


>UniRef50_A7BL13 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 349

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 338 TQFLRECHMEXGGEASTIFFHGXXASGIQVW 246
           T  LR+ H+E G EA   FF G   +G   W
Sbjct: 103 TDSLRKIHVEIGNEAWNTFFQGSGFNGADYW 133


>UniRef50_A2QF58 Cluster: Similarity; n=3; Trichocomaceae|Rep:
           Similarity - Aspergillus niger
          Length = 564

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -2

Query: 255 SSVXHAAXPDTSAEQP*RSGHDTPILDSPHKLSACSSL-YET*PLPPRXRHKIYNC 91
           SSV   A PD +      S +  PI    + LSA   L  +  P+PP  R+ +Y C
Sbjct: 155 SSVQTEATPDLTPSSSFSSNYSAPIYPE-NSLSAVEPLPVQAPPIPPSPRNNVYPC 209


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,915,678
Number of Sequences: 1657284
Number of extensions: 6826678
Number of successful extensions: 14824
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14822
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)