Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0298
         (385 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   2.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.6  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    20   9.7  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 303 W*SFYDFLPW 274
           W +FYD+ PW
Sbjct: 487 WHTFYDYRPW 496


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 291 RSFTTGFHMAFPKKLRCLSGGGLAELDHK 377
           + F        P+KLR   GG   E+++K
Sbjct: 105 KRFRNQIEALVPRKLRLADGGKTLEINYK 133


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 257 IQVWXMPRXQIRPPSNL 207
           +++W MPR  I P  N+
Sbjct: 155 MELWNMPRENIEPLPNV 171


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 310 SIWHSLRNCVA 342
           SIWHS++  VA
Sbjct: 171 SIWHSVKKTVA 181


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 230 QIRPPSNLDAQGMTLPYSILP 168
           QIRPP   D Q M  P   +P
Sbjct: 100 QIRPPILHDTQPMCNPQLQVP 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,291
Number of Sequences: 336
Number of extensions: 1582
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)