Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0297
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M59926-1|AAA28603.1|  459|Drosophila melanogaster RNA helicase p...    32   0.99 
AY051663-1|AAK93087.1|  459|Drosophila melanogaster LD21247p pro...    32   0.99 
AE014134-1792|AAN10728.1|  428|Drosophila melanogaster CG4916-PB...    32   0.99 
AE014134-1791|AAF52881.2|  459|Drosophila melanogaster CG4916-PA...    32   0.99 
AE014298-848|AAN09160.1|  517|Drosophila melanogaster CG32751-PA...    31   2.3  
AE014298-850|AAF46130.1|  553|Drosophila melanogaster CG3599-PA ...    29   5.3  

>M59926-1|AAA28603.1|  459|Drosophila melanogaster RNA helicase
           protein.
          Length = 459

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 87  KNKLHCFDVAFVNLQLNQQMLIVNSVRR 4
           + K+HC +  F  LQ+NQ ++  NS +R
Sbjct: 280 RQKVHCLNTLFSKLQINQSIIFCNSTQR 307


>AY051663-1|AAK93087.1|  459|Drosophila melanogaster LD21247p
           protein.
          Length = 459

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 87  KNKLHCFDVAFVNLQLNQQMLIVNSVRR 4
           + K+HC +  F  LQ+NQ ++  NS +R
Sbjct: 280 RQKVHCLNTLFSKLQINQSIIFCNSTQR 307


>AE014134-1792|AAN10728.1|  428|Drosophila melanogaster CG4916-PB,
           isoform B protein.
          Length = 428

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 87  KNKLHCFDVAFVNLQLNQQMLIVNSVRR 4
           + K+HC +  F  LQ+NQ ++  NS +R
Sbjct: 249 RQKVHCLNTLFSKLQINQSIIFCNSTQR 276


>AE014134-1791|AAF52881.2|  459|Drosophila melanogaster CG4916-PA,
           isoform A protein.
          Length = 459

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 87  KNKLHCFDVAFVNLQLNQQMLIVNSVRR 4
           + K+HC +  F  LQ+NQ ++  NS +R
Sbjct: 280 RQKVHCLNTLFSKLQINQSIIFCNSTQR 307


>AE014298-848|AAN09160.1|  517|Drosophila melanogaster CG32751-PA
           protein.
          Length = 517

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +1

Query: 85  FYGLLIFSLA-----KATSQKSTPEDSQYVAAVVEFIMSDDVEDNIRNYIHYIE 231
           ++G  +F LA       + Q S  +   Y A VVEF  S+++ DN+  Y+  I+
Sbjct: 5   YWGFFLFCLALGLMLNLSQQASLFKRDFYTAGVVEFEPSNELSDNLAGYLEIIQ 58


>AE014298-850|AAF46130.1|  553|Drosophila melanogaster CG3599-PA
           protein.
          Length = 553

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 64  IKTMKLIFYGLLIFSLAKATSQKSTPEDSQYVAAVVE 174
           +K+++L F  LL+  L  ++ Q S PED  Y AAVVE
Sbjct: 1   MKSIQLSF--LLLSVLFSSSHQLSKPEDPTYTAAVVE 35



 Score = 28.7 bits (61), Expect = 9.2
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +3

Query: 255 IIVFPELCLTNKTTAFVVPVYGSLKRYPXPAIHPDLYDNILVSISAAARXNQI 413
           IIVFPE  L ++ TA  VP      +   P    D Y+  L+ +S +AR N +
Sbjct: 67  IIVFPEHILNSQATATFVP---HESQNITPCYQTD-YELFLIELSCSARANHL 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,802,050
Number of Sequences: 53049
Number of extensions: 568192
Number of successful extensions: 1046
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)