Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0296
         (587 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   2.4  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   7.3  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   9.7  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = -2

Query: 484 CAXXLSLERNDMMGCPIXGXREKNHVLQYPEACXTHHASQSGAYQLQRMI 335
           C    ++E   +MG       + NH   Y  AC T    + G   L R I
Sbjct: 62  CHFSWTMEHYHVMGPACRDCAKGNHTDCYHPACITADGVERGVMSLNRKI 111


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 108 RYTPTEPRFRIRFIFAVPVASCWPAP 31
           R TP+ PR        VP +S W  P
Sbjct: 48  RSTPSSPRLAQASTCPVPCSSIWSRP 73


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 151 TVDDFPLCVHLVSDEYEQL 207
           T +  P  +HL+ +EY++L
Sbjct: 84  TCETLPSEIHLIKEEYDEL 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,436
Number of Sequences: 2352
Number of extensions: 13780
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)