Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0292
         (772 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.2  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   4.2  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    23   4.2  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   5.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   5.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   5.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   5.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   7.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   7.3  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 228 HRPLFWLWSCT 196
           HRP +W W+ T
Sbjct: 25  HRPAWWFWTAT 35


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 347 WRS-NYCEYPKFR*IPQSARSIAEXLXGGG 433
           WR   +   P+++ +P S   I+E +  GG
Sbjct: 76  WRGMTFVTVPRYKGVPSSLNVISEKIGNGG 105


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 333 PSVTPRCLPAKTSPLGQSYCTDCPL 259
           PS    C P   + + +  CT+CP+
Sbjct: 243 PSGGCHCKPGYQADVEKQECTECPI 267


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 326 TEGCDYPWRSNYCEY 370
           TEGC+  W+   C Y
Sbjct: 122 TEGCEVAWQFGKCIY 136


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 326 TEGCDYPWRSNYCEY 370
           TEGC+  W+   C Y
Sbjct: 96  TEGCEVAWQFGKCIY 110


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 6   TPSLTSSNAFVILN 47
           +PSLTS NA++I N
Sbjct: 228 SPSLTSLNAYLIKN 241


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 6   TPSLTSSNAFVILN 47
           +PSLTS NA++I N
Sbjct: 228 SPSLTSLNAYLIKN 241


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 6   TPSLTSSNAFVILN 47
           +PSLTS NA++I N
Sbjct: 279 SPSLTSLNAYLIKN 292


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 6   TPSLTSSNAFVILN 47
           +PSLTS NA++I N
Sbjct: 228 SPSLTSLNAYLIKN 241


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 335 CDYPWRSNYCEYPKFR 382
           C  PW + YC  P  R
Sbjct: 139 CGNPWNTRYCLTPTER 154


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 335 CDYPWRSNYCEYPKFR 382
           C  PW + YC  P  R
Sbjct: 192 CGNPWNTRYCLTPTER 207


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,724
Number of Sequences: 438
Number of extensions: 4952
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)