Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0291
         (818 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p pro...    48   2e-05
BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p pro...    48   2e-05
AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-P...    48   2e-05
AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA...    29   5.8  

>BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p
           protein.
          Length = 590

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 30/66 (45%), Positives = 35/66 (53%)
 Frame = +2

Query: 26  SNGKLALLSVSDKTGLLSLAKSLSECGLQLIXXXXXXXXXXXXPASQFKMCRTSRRAPEM 205
           S+ K+ALLSVSDKTGLL L KSL   G  L+               + +       APEM
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLV-ASGGTATSLRGAGLKVRDVSEITGAPEM 60

Query: 206 LGGRVK 223
           LGGRVK
Sbjct: 61  LGGRVK 66



 Score = 38.3 bits (85), Expect = 0.012
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +1

Query: 145 LRNAGLTVQDVSDITKSTGDARRSGEKLYHPAVHAGI*LDYPDSD 279
           LR AGL V+DVS+IT +  +      K  HPAVHAGI     DSD
Sbjct: 41  LRGAGLKVRDVSEITGAP-EMLGGRVKTLHPAVHAGILSRTTDSD 84


>BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p
           protein.
          Length = 590

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 30/66 (45%), Positives = 35/66 (53%)
 Frame = +2

Query: 26  SNGKLALLSVSDKTGLLSLAKSLSECGLQLIXXXXXXXXXXXXPASQFKMCRTSRRAPEM 205
           S+ K+ALLSVSDKTGLL L KSL   G  L+               + +       APEM
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLV-ASGGTATSLRGAGLKVRDVSEITGAPEM 60

Query: 206 LGGRVK 223
           LGGRVK
Sbjct: 61  LGGRVK 66



 Score = 38.3 bits (85), Expect = 0.012
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +1

Query: 145 LRNAGLTVQDVSDITKSTGDARRSGEKLYHPAVHAGI*LDYPDSD 279
           LR AGL V+DVS+IT +  +      K  HPAVHAGI     DSD
Sbjct: 41  LRGAGLKVRDVSEITGAP-EMLGGRVKTLHPAVHAGILSRTTDSD 84


>AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-PA
           protein.
          Length = 590

 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 30/66 (45%), Positives = 35/66 (53%)
 Frame = +2

Query: 26  SNGKLALLSVSDKTGLLSLAKSLSECGLQLIXXXXXXXXXXXXPASQFKMCRTSRRAPEM 205
           S+ K+ALLSVSDKTGLL L KSL   G  L+               + +       APEM
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLV-ASGGTATSLRGAGLKVRDVSEITGAPEM 60

Query: 206 LGGRVK 223
           LGGRVK
Sbjct: 61  LGGRVK 66



 Score = 38.3 bits (85), Expect = 0.012
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +1

Query: 145 LRNAGLTVQDVSDITKSTGDARRSGEKLYHPAVHAGI*LDYPDSD 279
           LR AGL V+DVS+IT +  +      K  HPAVHAGI     DSD
Sbjct: 41  LRGAGLKVRDVSEITGAP-EMLGGRVKTLHPAVHAGILSRTTDSD 84


>AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA
            protein.
          Length = 1937

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +2

Query: 398  RGSXKHRTFGRREPSLSSQQDPPXKXXXKXXNHEPGSRSSV 520
            RGS K +   R   S   QQ PP     K   H+P + S +
Sbjct: 1533 RGSMKDKKDTRHRQSPQQQQQPPPYESPKDNEHDPDTNSRI 1573


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,165,359
Number of Sequences: 53049
Number of extensions: 694491
Number of successful extensions: 1345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)