Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0290
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 154 6e-38
03_01_0547 + 4093196-4093657,4094267-4095148 154 6e-38
03_01_0544 + 4082528-4082989,4083585-4084466 154 6e-38
03_01_0543 + 4076981-4077442,4078145-4079026 154 6e-38
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 87 1e-17
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 87 1e-17
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 55 6e-08
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 46 2e-05
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 44 2e-04
02_04_0462 + 23131433-23132836 42 6e-04
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 40 0.002
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 32 0.39
03_05_0511 + 25056018-25059107 32 0.51
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.67
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.89
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.89
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 1.2
07_01_0784 + 6083477-6083653,6086052-6086238,6086672-6086844,608... 30 1.6
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 1.6
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 2.1
01_06_0662 + 30987187-30987277,30987825-30990214 30 2.1
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 29 2.7
02_04_0148 - 20198407-20201424 29 3.6
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 29 4.8
08_01_0494 + 4305440-4305727 28 8.3
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 8.3
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 154 bits (374), Expect = 6e-38
Identities = 96/197 (48%), Positives = 108/197 (54%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + ADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
G FEA G+ K ++ A LA AR+ I + VS
Sbjct: 121 GGFEA--GISKD-GQTREHALLA--FTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP 636
SY+KK+GY P FVP
Sbjct: 176 SYLKKVGYNPDKIPFVP 192
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY T+IDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
K+G TREHALL F P YS+ E KE +++ NP
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD-ATTPKYSKARYDEIVKEVSSYLKKVGYNPDK 187
Query: 623 VASCPISGWXGDNI 664
+ PISG+ GDN+
Sbjct: 188 IPFVPISGFEGDNM 201
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 154 bits (374), Expect = 6e-38
Identities = 96/197 (48%), Positives = 108/197 (54%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + ADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
G FEA G+ K ++ A LA AR+ I + VS
Sbjct: 121 GGFEA--GISKD-GQTREHALLA--FTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP 636
SY+KK+GY P FVP
Sbjct: 176 SYLKKVGYNPDKIPFVP 192
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY T+IDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
K+G TREHALL F P YS+ E KE +++ NP
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD-ATTPKYSKARYDEIVKEVSSYLKKVGYNPDK 187
Query: 623 VASCPISGWXGDNI 664
+ PISG+ GDN+
Sbjct: 188 IPFVPISGFEGDNM 201
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 154 bits (374), Expect = 6e-38
Identities = 96/197 (48%), Positives = 108/197 (54%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + ADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
G FEA G+ K ++ A LA AR+ I + VS
Sbjct: 121 GGFEA--GISKD-GQTREHALLA--FTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP 636
SY+KK+GY P FVP
Sbjct: 176 SYLKKVGYNPDKIPFVP 192
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY T+IDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
K+G TREHALL F P YS+ E KE +++ NP
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD-ATTPKYSKARYDEIVKEVSSYLKKVGYNPDK 187
Query: 623 VASCPISGWXGDNI 664
+ PISG+ GDN+
Sbjct: 188 IPFVPISGFEGDNM 201
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 154 bits (374), Expect = 6e-38
Identities = 96/197 (48%), Positives = 108/197 (54%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + ADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
G FEA G+ K ++ A LA AR+ I + VS
Sbjct: 121 GGFEA--GISKD-GQTREHALLA--FTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP 636
SY+KK+GY P FVP
Sbjct: 176 SYLKKVGYNPDKIPFVP 192
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY T+IDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
K+G TREHALL F P YS+ E KE +++ NP
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD-ATTPKYSKARYDEIVKEVSSYLKKVGYNPDK 187
Query: 623 VASCPISGWXGDNI 664
+ PISG+ GDN+
Sbjct: 188 IPFVPISGFEGDNM 201
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 87.0 bits (206), Expect = 1e-17
Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Frame = +1
Query: 61 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 240
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 241 ERERGXXXXXXXXXXXXXXTMLPSLMLLDT---EISSRT*SQXPLXADCAVLIVAAGTGE 411
ERERG T ++LLD+ + AD A+L+V A TG
Sbjct: 306 ERERG---VTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGS 362
Query: 412 FEA 420
FEA
Sbjct: 363 FEA 365
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +
Sbjct: 311 VTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGAT 347
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 87.0 bits (206), Expect = 1e-17
Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Frame = +1
Query: 61 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 240
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 241 ERERGXXXXXXXXXXXXXXTMLPSLMLLDT---EISSRT*SQXPLXADCAVLIVAAGTGE 411
ERERG T ++LLD+ + AD A+L+V A TG
Sbjct: 306 ERERG---VTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGS 362
Query: 412 FEA 420
FEA
Sbjct: 363 FEA 365
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +
Sbjct: 311 VTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGAT 347
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 54.8 bits (126), Expect = 6e-08
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +1
Query: 94 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGXXXXXX 273
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 274 XXXXXXXXTMLPSLMLLDTEISSR-T*SQXP------LXADCAVLIVAAGTGEFE 417
T +LD + + S P AD VL+++A GEFE
Sbjct: 64 RAHFETETT---RFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFE 115
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +3
Query: 258 TIXIALWKFETSKYYVTIIDAP----GHRDFIKNMITGTS 365
T+ + FET TI+DAP GH+ ++ NMI+G S
Sbjct: 59 TVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGAS 98
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 46.4 bits (105), Expect = 2e-05
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
IT+ + + F+T Y+V ++D+PGH+DF+ NMI+G +
Sbjct: 298 ITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGAT 334
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +1
Query: 190 MGKGSFKYAWVLDKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDT---EISSRT*SQX 360
+GKGSF YAW +D+ ERERG T ++LLD+ +
Sbjct: 276 IGKGSFAYAWAMDESADERERG---ITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISG 332
Query: 361 PLXADCAVLIVAAGTGEFEALGGV 432
+D A+L++ A G FEA G+
Sbjct: 333 ATQSDAAILVIDASIGSFEAGMGI 356
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI A ++ET+K + +D PGH D++KNMITG +
Sbjct: 116 ITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAA 152
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 52 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 201
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>02_04_0462 + 23131433-23132836
Length = 467
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI A ++ET + +D PGH D++KNMITG +
Sbjct: 119 ITINTATVEYETETRHYAHVDCPGHADYVKNMITGAA 155
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 43 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 201
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 258 TIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
T+ + FET TI+DAPGH+ ++ NMI+G S
Sbjct: 18 TVEVGRAHFETETTRFTILDAPGHKSYVPNMISGAS 53
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 32.3 bits (70), Expect = 0.39
Identities = 25/62 (40%), Positives = 29/62 (46%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 249
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 250 RG 255
RG
Sbjct: 103 RG 104
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.51
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCG 141
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCG 141
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 19 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 141
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 19 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 141
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 64 HINIVVIGHVDSGKSTTTGHLIYKCG 141
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>07_01_0784 +
6083477-6083653,6086052-6086238,6086672-6086844,
6087520-6087678,6088677-6088817,6088880-6088941,
6089120-6089255,6091142-6091236,6091333-6091448,
6091538-6091667,6091757-6091811,6091889-6091930,
6092534-6092656
Length = 531
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 428 PPRASNSPVPAATMSTAQSAXRGXCDHVLDEISVSRSINDGNIVLASFELPESNXDCDPR 249
PPRA+ V A+ + + +LD+ S + GN+V S ++ S D PR
Sbjct: 43 PPRAAADVVAASPVRSQNEDLNKPLLEILDDHSSQSNTFPGNVVGESSKVQTSRSDTSPR 102
Query: 248 S 246
S
Sbjct: 103 S 103
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 141
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 168
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 141
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGI 147
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 192
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 565 GIQEGVSSYIKKIGYKPSCCRFVPHFWMARGQH 663
G+ G++ Y+ IGY PS RF+ HF + H
Sbjct: 522 GLWTGLTYYV--IGYAPSFVRFIQHFVVLFAMH 552
>08_01_0494 + 4305440-4305727
Length = 95
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 431 TPPRASNSPVPAATMSTAQSAXRGXCDHVLDEISVS 324
TP RAS+ P P +T+ R D +++EI VS
Sbjct: 60 TPRRASSGPSPTSTLLDGDGG-RARVDGIVEEIHVS 94
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 58 KTHINIVVIGHVDSG 102
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,522,418
Number of Sequences: 37544
Number of extensions: 358884
Number of successful extensions: 939
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -