Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0290
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 181 5e-46
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 181 5e-46
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 165 3e-41
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 150 8e-37
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 84 1e-16
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 42 3e-04
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 42 3e-04
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 42 3e-04
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 38 0.005
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 38 0.005
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.086
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.26
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.26
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 32 0.35
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 32 0.35
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 32 0.46
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 32 0.46
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 32 0.46
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 32 0.46
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 32 0.46
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 32 0.46
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 32 0.46
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 32 0.46
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 32 0.46
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 32 0.46
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.4
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.4
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.3
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 181 bits (440), Expect = 5e-46
Identities = 109/216 (50%), Positives = 120/216 (55%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + + ADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
GEFEA G+ K+ ++ A LA ARF I VS
Sbjct: 121 GEFEA--GISKN-GQTREHALLA--QTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVS 175
Query: 586 SYIKKIGYKPSCCRFVPHFWMARGQHXWGLQXKMPW 693
+IKKIGY P FVP G + + MPW
Sbjct: 176 GFIKKIGYNPKAVPFVPISGF-NGDNMLEVSSNMPW 210
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY+TIIDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTS 107
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFP-LEPPYSEPDLXESRKEYPHTSRRLATNPA 619
KNG TREHALL V N EPP+SE E E +++ NP
Sbjct: 129 KNGQTREHALLA--QTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPK 186
Query: 620 AVASCPISGWXGDNI 664
AV PISG+ GDN+
Sbjct: 187 AVPFVPISGFNGDNM 201
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 181 bits (440), Expect = 5e-46
Identities = 109/216 (50%), Positives = 120/216 (55%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + + ADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
GEFEA G+ K+ ++ A LA ARF I VS
Sbjct: 121 GEFEA--GISKN-GQTREHALLA--QTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVS 175
Query: 586 SYIKKIGYKPSCCRFVPHFWMARGQHXWGLQXKMPW 693
+IKKIGY P FVP G + + MPW
Sbjct: 176 GFIKKIGYNPKAVPFVPISGF-NGDNMLEVSSNMPW 210
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY+TIIDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTS 107
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFP-LEPPYSEPDLXESRKEYPHTSRRLATNPA 619
KNG TREHALL V N EPP+SE E E +++ NP
Sbjct: 129 KNGQTREHALLA--QTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPK 186
Query: 620 AVASCPISGWXGDNI 664
AV PISG+ GDN+
Sbjct: 187 AVPFVPISGFNGDNM 201
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 165 bits (401), Expect = 3e-41
Identities = 86/132 (65%), Positives = 92/132 (69%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + + ADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 406 GEFEALGGVXKS 441
GEFEA G+ K+
Sbjct: 121 GEFEA--GISKN 130
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY+TIIDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTS 107
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 150 bits (364), Expect = 8e-37
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 226 DKLKAERERG 255
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY+TIIDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTS 107
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 536 EPPYSEPDLXESRKEYPHTSRRLATNPAAVASCPISGWXGDNI 664
EPP+SE E E +++ NP AV PISG+ GDN+
Sbjct: 125 EPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNM 167
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 226 DKLKAER 246
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 93.1 bits (221), Expect = 2e-19
Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Frame = +1
Query: 55 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 234
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 235 KAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQ---XPLXADCAVLIVAAGT 405
+ ERERG T ++LLD S AD A+L+V A T
Sbjct: 227 EEERERG---VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATT 283
Query: 406 GEFE 417
GEFE
Sbjct: 284 GEFE 287
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
+T+ I FETS + ++DAPGH+DFI NMITGTS
Sbjct: 234 VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTS 270
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 93.1 bits (221), Expect = 2e-19
Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Frame = +1
Query: 55 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 234
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 235 KAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQ---XPLXADCAVLIVAAGT 405
+ ERERG T ++LLD S AD A+L+V A T
Sbjct: 245 EEERERG---VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATT 301
Query: 406 GEFE 417
GEFE
Sbjct: 302 GEFE 305
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
+T+ I FETS + ++DAPGH+DFI NMITGTS
Sbjct: 252 VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTS 288
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 83.8 bits (198), Expect = 1e-16
Identities = 46/123 (37%), Positives = 65/123 (52%)
Frame = +1
Query: 49 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 228
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 229 KLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGTG 408
ERE+G L + AD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 409 EFE 417
EFE
Sbjct: 224 EFE 226
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 258 TIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
T+ + FET K + TI+DAPGH+ F+ NMI G +
Sbjct: 174 TVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGAN 209
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI ++ET+K + ID PGH D+IKNMITG +
Sbjct: 98 ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAA 134
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 52 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 222
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 223 LDKLKAER 246
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI ++ET+K + ID PGH D+IKNMITG +
Sbjct: 99 ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAA 135
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 52 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 222
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 223 LDKLKAER 246
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI ++ET+K + ID PGH D+IKNMITG +
Sbjct: 99 ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAA 135
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 52 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 222
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 223 LDKLKAER 246
L+ A+R
Sbjct: 106 LEYETAKR 113
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI +A +E+ + D PGH DFIKNMI GTS
Sbjct: 94 ITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTS 130
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 58 KTHINIVVIGHVDSGKSTTT 117
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI +A +E+ + D PGH DFIKNMI GTS
Sbjct: 94 ITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTS 130
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 58 KTHINIVVIGHVDSGKSTTT 117
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGI 147
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGID 150
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 141
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 141
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 13 TRQFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 132
T ++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 124 TEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 186
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 13 TRQFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 132
T ++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 124 TEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 586 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 618
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 567 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 599
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 623 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 655
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 577 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 609
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 577 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 609
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 577 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 609
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 586 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 618
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 577 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 609
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 567 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 599
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 576 RSILIHQEDWLQTQLLSLRAPFLDGXGTTXLGP 674
R L+ +++ L L L+APFL GTT LGP
Sbjct: 623 RQKLLREQEVLNQVFLLLKAPFLPRQGTTELGP 655
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 148 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 249
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 148 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 249
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 67 INIVVIGHVDSGKSTTT 117
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 67 INIVVIGHVDSGKSTTT 117
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,096,316
Number of Sequences: 27780
Number of extensions: 288903
Number of successful extensions: 742
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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