Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0290
(704 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 188 6e-50
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 179 2e-47
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 80 2e-17
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 75 7e-16
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.53
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 188 bits (457), Expect = 6e-50
Identities = 114/217 (52%), Positives = 126/217 (58%), Gaps = 1/217 (0%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + + ADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
GEFEA G+ K+ ++ A LA RF I++ VS
Sbjct: 121 GEFEA--GISKN-GQTREHALLA--FTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP-HFWMARGQHXWGLQXKMPW 693
SYIKKIGY P+ FVP W G + + KMPW
Sbjct: 176 SYIKKIGYNPAAVAFVPISGW--HGDNMLEVSSKMPW 210
Score = 79.8 bits (188), Expect = 2e-17
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFETSKYYVTIIDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 107
Score = 62.9 bits (146), Expect = 3e-12
Identities = 35/74 (47%), Positives = 40/74 (54%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
KNG TREHALL F V EPPYSE E +KE +++ NPAA
Sbjct: 129 KNGQTREHALLAFTLGVKQLIVGVNKMD-STEPPYSETRFEEIKKEVSSYIKKIGYNPAA 187
Query: 623 VASCPISGWXGDNI 664
VA PISGW GDN+
Sbjct: 188 VAFVPISGWHGDNM 201
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 179 bits (436), Expect = 2e-47
Identities = 112/217 (51%), Positives = 123/217 (56%), Gaps = 1/217 (0%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + + ADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
GEFEA G+ K+ ++ A LA ARF I++ VS
Sbjct: 121 GEFEA--GISKN-GQTREHALLA--FTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP-HFWMARGQHXWGLQXKMPW 693
SYIKKIGY + FVP W G + K PW
Sbjct: 176 SYIKKIGYNTASVAFVPISGW--HGDNMLEPSPKTPW 210
Score = 78.6 bits (185), Expect = 5e-17
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYYVTIIDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTS 107
Score = 60.1 bits (139), Expect = 2e-11
Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPL-EPPYSEPDLXESRKEYPHTSRRLATNPA 619
KNG TREHALL F V N + +PPYSE E +KE +++ N A
Sbjct: 129 KNGQTREHALLAFT--LGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTA 186
Query: 620 AVASCPISGWXGDNIXGAFXPKCLGFKG 703
+VA PISGW GDN+ PK +KG
Sbjct: 187 SVAFVPISGWHGDNMLEP-SPKTPWYKG 213
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 79.8 bits (188), Expect = 2e-17
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFETSKYYVTIIDAPGHRDFIKNMITGTS
Sbjct: 14 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 50
Score = 69.7 bits (163), Expect = 2e-14
Identities = 58/160 (36%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Frame = +1
Query: 217 WVLDKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVA 396
WVLDKLKAERERG + + + ADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 397 AGTGEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQE 576
AGTGEFEA G+ K+ ++ A LA RF I++
Sbjct: 61 AGTGEFEA--GISKN-GQTREHALLA--FTLGVKQLIVGVNKMDSTEPPYSETRFEEIKK 115
Query: 577 GVSSYIKKIGYKPSCCRFVP-HFWMARGQHXWGLQXKMPW 693
VSSYIKKIGY P+ FVP W G + + KMPW
Sbjct: 116 EVSSYIKKIGYNPAAVAFVPISGW--HGDNMLEVSSKMPW 153
Score = 62.9 bits (146), Expect = 3e-12
Identities = 35/74 (47%), Positives = 40/74 (54%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
KNG TREHALL F V EPPYSE E +KE +++ NPAA
Sbjct: 72 KNGQTREHALLAFTLGVKQLIVGVNKMD-STEPPYSETRFEEIKKEVSSYIKKIGYNPAA 130
Query: 623 VASCPISGWXGDNI 664
VA PISGW GDN+
Sbjct: 131 VAFVPISGWHGDNM 144
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 74.9 bits (176), Expect = 7e-16
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 267 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
IALWKFETSKYYVTIIDAPGHRDFIKNMITGTS
Sbjct: 2 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 34
Score = 62.9 bits (146), Expect = 3e-12
Identities = 35/74 (47%), Positives = 40/74 (54%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
KNG TREHALL F V EPPYSE E +KE +++ NPAA
Sbjct: 56 KNGQTREHALLAFTLGVKQLIVGVNKMD-STEPPYSETRFEEIKKEVSSYIKKIGYNPAA 114
Query: 623 VASCPISGWXGDNI 664
VA PISGW GDN+
Sbjct: 115 VAFVPISGWHGDNM 128
Score = 59.7 bits (138), Expect = 3e-11
Identities = 45/109 (41%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +1
Query: 370 ADCAVLIVAAGTGEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ 549
ADCAVLIVAAGTGEFEA G+ K+ ++ A LA
Sbjct: 36 ADCAVLIVAAGTGEFEA--GISKN-GQTREHALLA--FTLGVKQLIVGVNKMDSTEPPYS 90
Query: 550 *ARFXGIQEGVSSYIKKIGYKPSCCRFVP-HFWMARGQHXWGLQXKMPW 693
RF I++ VSSYIKKIGY P+ FVP W G + + KMPW
Sbjct: 91 ETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW--HGDNMLEVSSKMPW 137
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.53
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 58 KTHINIVVIGHVDSGKST 111
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 303 VTIIDAPGHRDFI 341
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 67 INIVVIGHVDSGKST 111
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/26 (30%), Positives = 11/26 (42%)
Frame = -1
Query: 437 FXTPPRASNSPVPAATMSTAQSAXRG 360
+ PP PVP + +T RG
Sbjct: 1645 YIAPPNRKLPPVPGSNYNTCDRIKRG 1670
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,415
Number of Sequences: 438
Number of extensions: 3473
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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