Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0290
(704 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 151 4e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 151 4e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 151 4e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 151 4e-37
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 83 2e-16
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 74 8e-14
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 44 1e-04
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 42 4e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.24
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.24
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 3.0
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 28 5.2
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 28 6.9
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 28 6.9
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 28 6.9
At5g04810.1 68418.m00503 pentatricopeptide (PPR) repeat-containi... 27 9.2
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 151 bits (366), Expect = 4e-37
Identities = 95/197 (48%), Positives = 107/197 (54%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + ADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
G FEA G+ K ++ A LA AR+ I + VS
Sbjct: 121 GGFEA--GISKD-GQTREHALLA--FTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP 636
SY+KK+GY P FVP
Sbjct: 176 SYLKKVGYNPDKIPFVP 192
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY T+IDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
K+G TREHALL F P YS+ E KE +++ NP
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD-ATTPKYSKARYDEIIKEVSSYLKKVGYNPDK 187
Query: 623 VASCPISGWXGDNI 664
+ PISG+ GDN+
Sbjct: 188 IPFVPISGFEGDNM 201
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (366), Expect = 4e-37
Identities = 95/197 (48%), Positives = 107/197 (54%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + ADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
G FEA G+ K ++ A LA AR+ I + VS
Sbjct: 121 GGFEA--GISKD-GQTREHALLA--FTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP 636
SY+KK+GY P FVP
Sbjct: 176 SYLKKVGYNPDKIPFVP 192
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY T+IDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
K+G TREHALL F P YS+ E KE +++ NP
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD-ATTPKYSKARYDEIIKEVSSYLKKVGYNPDK 187
Query: 623 VASCPISGWXGDNI 664
+ PISG+ GDN+
Sbjct: 188 IPFVPISGFEGDNM 201
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (366), Expect = 4e-37
Identities = 95/197 (48%), Positives = 107/197 (54%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + ADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
G FEA G+ K ++ A LA AR+ I + VS
Sbjct: 121 GGFEA--GISKD-GQTREHALLA--FTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP 636
SY+KK+GY P FVP
Sbjct: 176 SYLKKVGYNPDKIPFVP 192
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY T+IDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
K+G TREHALL F P YS+ E KE +++ NP
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD-ATTPKYSKARYDEIIKEVSSYLKKVGYNPDK 187
Query: 623 VASCPISGWXGDNI 664
+ PISG+ GDN+
Sbjct: 188 IPFVPISGFEGDNM 201
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (366), Expect = 4e-37
Identities = 95/197 (48%), Positives = 107/197 (54%)
Frame = +1
Query: 46 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 225
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 226 DKLKAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGT 405
DKLKAERERG + + ADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 406 GEFEALGGVXKS*ERSXP*ACLAXXXXXXXXXXXXXXXXXXXXXXXIQ*ARFXGIQEGVS 585
G FEA G+ K ++ A LA AR+ I + VS
Sbjct: 121 GGFEA--GISKD-GQTREHALLA--FTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVS 175
Query: 586 SYIKKIGYKPSCCRFVP 636
SY+KK+GY P FVP
Sbjct: 176 SYLKKVGYNPDKIPFVP 192
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI IALWKFET+KYY T+IDAPGHRDFIKNMITGTS
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = +2
Query: 443 KNGXTREHALLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAA 622
K+G TREHALL F P YS+ E KE +++ NP
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMD-ATTPKYSKARYDEIIKEVSSYLKKVGYNPDK 187
Query: 623 VASCPISGWXGDNI 664
+ PISG+ GDN+
Sbjct: 188 IPFVPISGFEGDNM 201
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 82.6 bits (195), Expect = 2e-16
Identities = 44/120 (36%), Positives = 63/120 (52%)
Frame = +1
Query: 61 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 240
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 241 ERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGTGEFEA 420
ERERG + L + AD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Score = 44.0 bits (99), Expect = 1e-04
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
IT+ +A+ F + +++V ++D+PGH+DF+ NMI G +
Sbjct: 303 ITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGAT 339
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 74.1 bits (174), Expect = 8e-14
Identities = 40/121 (33%), Positives = 63/121 (52%)
Frame = +1
Query: 55 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 234
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 235 KAERERGXXXXXXXXXXXXXXTMLPSLMLLDTEISSRT*SQXPLXADCAVLIVAAGTGEF 414
+ ER +G T L + AD VL+++A GEF
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217
Query: 415 E 417
E
Sbjct: 218 E 218
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI A ++ET+K + +D PGH D++KNMITG +
Sbjct: 116 ITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAA 152
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 52 KEKTHINIVVIGHVDSGKSTTT 117
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 255 ITIXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 365
ITI A ++ET + +D PGH D++KNMITG +
Sbjct: 128 ITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA 164
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 43 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 177
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGG 144
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 58 KTHINIVVIGHVDSGKSTTTGHLIYKCG 141
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCG 141
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 168
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 34 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 153
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGI 147
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 70 NIVVIGHVDSGKSTTTGHLIYKCGGI 147
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g04810.1 68418.m00503 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 952
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +2
Query: 470 LLRFXPXCXTAHRXVKPNGFPLEPPYSEPDLXESRKEYPHTSRRLATNPAAVASCPI 640
L R P + +P P EPP S PDL K +S + +P P+
Sbjct: 22 LRRHSPVASISFSLKQPPPQPPEPPESPPDLRRPEKSIGSSSSSSSPSPIPSPKTPL 78
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,460,103
Number of Sequences: 28952
Number of extensions: 275572
Number of successful extensions: 678
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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