Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0289
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122220-1|AAM52732.1|  273|Drosophila melanogaster LP11234p pro...    46   7e-05
AE014134-937|AAN10546.1|  273|Drosophila melanogaster CG6957-PB,...    46   7e-05
AE014134-936|AAF52263.1|  273|Drosophila melanogaster CG6957-PA,...    46   7e-05

>AY122220-1|AAM52732.1|  273|Drosophila melanogaster LP11234p
           protein.
          Length = 273

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
 Frame = +3

Query: 435 HHYYMXDEXXXHIDX*PSXAHVLDGXHP--IYXANVDASXNXTGGWRSAFXHRGIXPDGX 608
           +HY+M +    HID  P   H+LDG     +   N         G    F   GI PDG 
Sbjct: 85  YHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGGVELFI-GGIGPDGH 143

Query: 609 IAXKETGVLPGVSEAHLXTXANKTLXAXKRXFXN 710
           IA  E G    VS   + T A  TL A  R F N
Sbjct: 144 IAFNEPG-SSLVSRTRVKTLAQDTLEANARFFDN 176



 Score = 35.5 bits (78), Expect = 0.074
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 172 MRLIILEDASIVXDWAARFVLXRITQFARVREDTSCXXXPPGGRP 306
           MRL+ILE +  V  WAA++V+ RI  F    +       P G  P
Sbjct: 1   MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTP 45



 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 350 LSFQXVXTFNXDEYXGL 400
           +SFQ V TFN DEY GL
Sbjct: 61  VSFQYVKTFNMDEYVGL 77


>AE014134-937|AAN10546.1|  273|Drosophila melanogaster CG6957-PB,
           isoform B protein.
          Length = 273

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
 Frame = +3

Query: 435 HHYYMXDEXXXHIDX*PSXAHVLDGXHP--IYXANVDASXNXTGGWRSAFXHRGIXPDGX 608
           +HY+M +    HID  P   H+LDG     +   N         G    F   GI PDG 
Sbjct: 85  YHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGGVELFI-GGIGPDGH 143

Query: 609 IAXKETGVLPGVSEAHLXTXANKTLXAXKRXFXN 710
           IA  E G    VS   + T A  TL A  R F N
Sbjct: 144 IAFNEPG-SSLVSRTRVKTLAQDTLEANARFFDN 176



 Score = 35.5 bits (78), Expect = 0.074
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 172 MRLIILEDASIVXDWAARFVLXRITQFARVREDTSCXXXPPGGRP 306
           MRL+ILE +  V  WAA++V+ RI  F    +       P G  P
Sbjct: 1   MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTP 45



 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 350 LSFQXVXTFNXDEYXGL 400
           +SFQ V TFN DEY GL
Sbjct: 61  VSFQYVKTFNMDEYVGL 77


>AE014134-936|AAF52263.1|  273|Drosophila melanogaster CG6957-PA,
           isoform A protein.
          Length = 273

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
 Frame = +3

Query: 435 HHYYMXDEXXXHIDX*PSXAHVLDGXHP--IYXANVDASXNXTGGWRSAFXHRGIXPDGX 608
           +HY+M +    HID  P   H+LDG     +   N         G    F   GI PDG 
Sbjct: 85  YHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGGVELFI-GGIGPDGH 143

Query: 609 IAXKETGVLPGVSEAHLXTXANKTLXAXKRXFXN 710
           IA  E G    VS   + T A  TL A  R F N
Sbjct: 144 IAFNEPG-SSLVSRTRVKTLAQDTLEANARFFDN 176



 Score = 35.5 bits (78), Expect = 0.074
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 172 MRLIILEDASIVXDWAARFVLXRITQFARVREDTSCXXXPPGGRP 306
           MRL+ILE +  V  WAA++V+ RI  F    +       P G  P
Sbjct: 1   MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTP 45



 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 350 LSFQXVXTFNXDEYXGL 400
           +SFQ V TFN DEY GL
Sbjct: 61  VSFQYVKTFNMDEYVGL 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,609,220
Number of Sequences: 53049
Number of extensions: 387955
Number of successful extensions: 545
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)