BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0288
(749 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 177 3e-46
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 177 3e-46
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 177 3e-46
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 165 1e-42
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 25 3.3
AJ439353-5|CAD27927.1| 459|Anopheles gambiae putative G-protein... 24 5.8
AJ237705-1|CAB40346.1| 557|Anopheles gambiae putative apyrase p... 24 5.8
AJ237704-1|CAB40345.1| 557|Anopheles gambiae apyrase protein. 24 5.8
AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine... 23 7.6
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 177 bits (431), Expect = 3e-46
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 511 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 332
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 331 QQMWISKQEYDESGPSIVHRKCF 263
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 142 bits (344), Expect = 1e-35
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -3
Query: 726 LTWEQKLATVXSSSSFEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 547
L +EQ++AT SSSS EKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN
Sbjct: 222 LDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 281
Query: 546 SIMKCDVDIRKD 511
SIMKCDVDIRKD
Sbjct: 282 SIMKCDVDIRKD 293
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 177 bits (431), Expect = 3e-46
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 511 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 332
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 331 QQMWISKQEYDESGPSIVHRKCF 263
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 142 bits (344), Expect = 1e-35
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -3
Query: 726 LTWEQKLATVXSSSSFEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 547
L +EQ++AT SSSS EKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN
Sbjct: 222 LDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 281
Query: 546 SIMKCDVDIRKD 511
SIMKCDVDIRKD
Sbjct: 282 SIMKCDVDIRKD 293
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 177 bits (431), Expect = 3e-46
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 511 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 332
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 331 QQMWISKQEYDESGPSIVHRKCF 263
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
Score = 142 bits (344), Expect = 1e-35
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -3
Query: 726 LTWEQKLATVXSSSSFEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 547
L +EQ++AT SSSS EKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN
Sbjct: 222 LDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 281
Query: 546 SIMKCDVDIRKD 511
SIMKCDVDIRKD
Sbjct: 282 SIMKCDVDIRKD 293
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 165 bits (401), Expect = 1e-42
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = -2
Query: 511 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 332
LYAN+VLSGGTTMYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANSVLSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 331 QQMWISKQEYDESGPSIVHRKCF 263
Q MWISK EYDE GP IVHRKCF
Sbjct: 354 QTMWISKHEYDEGGPGIVHRKCF 376
Score = 124 bits (299), Expect = 3e-30
Identities = 57/72 (79%), Positives = 63/72 (87%)
Frame = -3
Query: 726 LTWEQKLATVXSSSSFEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 547
L +EQ++ +SSS EKSYELPDGQVITIGNERFR PEALFQPSFLGME+ GIHET YN
Sbjct: 222 LDFEQEMQAAAASSSSEKSYELPDGQVITIGNERFRAPEALFQPSFLGMESTGIHETVYN 281
Query: 546 SIMKCDVDIRKD 511
SIM+CDVDIRKD
Sbjct: 282 SIMRCDVDIRKD 293
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
cell-adhesion protein protein.
Length = 1881
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 179 VRYYCN*RNSDGRTERGPRARLD 111
+RYY + S+G+TE G +LD
Sbjct: 867 LRYYIDRSLSEGKTEEGALVKLD 889
>AJ439353-5|CAD27927.1| 459|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 459
Score = 23.8 bits (49), Expect = 5.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 222 PAAGCWRQRRACV*KHFLCTMEGPDSSYSCFEIHIC 329
P+ CW R + LCT P + C I IC
Sbjct: 234 PSCSCWVVRIPIGKTYSLCTNSFPLGTLLCVGIVIC 269
>AJ237705-1|CAB40346.1| 557|Anopheles gambiae putative apyrase
protein.
Length = 557
Score = 23.8 bits (49), Expect = 5.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 445 FAYGRRFQGTWWYHRTIRCWRKVLTDVHVALHDGVICG 558
F G FQGT WY+ WR V + + D + G
Sbjct: 93 FNVGDNFQGTIWYN--YHRWRVVARFIKLLHPDAMTLG 128
>AJ237704-1|CAB40345.1| 557|Anopheles gambiae apyrase protein.
Length = 557
Score = 23.8 bits (49), Expect = 5.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 445 FAYGRRFQGTWWYHRTIRCWRKVLTDVHVALHDGVICG 558
F G FQGT WY+ WR V + + D + G
Sbjct: 93 FNVGDNFQGTIWYN--YHRWRVVARFIKLLHPDAMTLG 128
>AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine
protease protein.
Length = 405
Score = 23.4 bits (48), Expect = 7.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 637 DSDDLTVXKFVRLLEGTAGXNGGQFLLPSQ 726
D+DD V +RL + N GQ +LP++
Sbjct: 28 DTDDRPVWDSIRLCDIPNEPNPGQCMLPAE 57
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,362
Number of Sequences: 2352
Number of extensions: 16599
Number of successful extensions: 51
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -