Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0287
         (810 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.30 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   3.7  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         24   6.4  
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    23   8.4  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   8.4  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 0.30
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 480 QAP*PTSSRTGPRQHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQ 623
           Q P     +   +Q   GER + P+ R Q  + +HQQ     Q  R+Q
Sbjct: 277 QRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQ 324


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -3

Query: 493 GYGACQLAPHEQVVNELGSRARVLQ--SQHRRIXREAGAVHRIDR-EVSP 353
           GY   Q   H QVV  +G++   LQ   QH+R  +     H +D+ EV P
Sbjct: 158 GYQQQQSQSHRQVV--IGTQQECLQPEQQHQRQQQHTVRRHNVDKVEVIP 205


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 283 DLLQHDEETDPGGSGRVNPVLS 348
           D LQ +E   P G+GR+  V S
Sbjct: 98  DQLQQEETDAPAGAGRIRKVRS 119


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = -3

Query: 562 GRARGLMRRSPTTCWRGPVRDEVGYGACQLAPHEQVVNELGSRAR 428
           G+  G + ++ TT             AC ++ HEQ   EL  R +
Sbjct: 34  GQHYGXLLKASTTWNEKECNGSTKLAACVVSEHEQAYRELKQRCQ 78


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -1

Query: 132 YSKKYVLVKAVVVSQAF 82
           YSK Y+L+KA + +Q+F
Sbjct: 166 YSKLYLLLKATLSAQSF 182


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,853
Number of Sequences: 2352
Number of extensions: 13262
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)