Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0284
         (837 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     27   0.18 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   6.9  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 440 THFYSSHAVISNSKGTLLDYLLKISRGGTPSGQL 339
           THF+ SH+    S GT   +++++     P  +L
Sbjct: 174 THFWHSHSGFQRSDGTFGPFIVRVPEEDNPHAKL 207


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 197 NPCLMQTSTYIWTLTRTKMTKSVSLR 120
           +PC +    Y WT    ++ K+ +LR
Sbjct: 584 SPCCITMRRYGWTANMERIMKAQALR 609


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 287 GNDGKGNGVVISILKRYNANLK 222
           G+  KGN   +  LK  N NLK
Sbjct: 76  GDIEKGNFAEVEALKEINPNLK 97


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 157 KVQI*VDVCIKHGFLRQKA 213
           K+++  ++  KHGFL++KA
Sbjct: 76  KLKLTNNISDKHGFLKEKA 94


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -2

Query: 209  FWRRNPCLMQTSTYIWTLTRTKMTKSVSLRIPRKPI 102
            FW ++ C    +T       + M  S +  +P KP+
Sbjct: 2270 FWNKDHCDWPENTECHPDASSTMAPSTTPMVPDKPV 2305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,926
Number of Sequences: 336
Number of extensions: 4216
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)