Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0284
         (837 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0)                       31   1.5  
SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)                  30   2.7  
SB_42894| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.5  
SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24)               29   3.5  
SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)                      29   6.2  
SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2)                 29   6.2  
SB_1465| Best HMM Match : PAN (HMM E-Value=0.012)                      28   8.2  

>SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0)
          Length = 2682

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -1

Query: 174  DLYLDFDKNKNDKICFSTNTKKTDKLLESKNKLEYGGKNFELNIHLEGN 28
            D+  D D+  N K      T   DKL+ S NK+E  G   +L +  EG+
Sbjct: 2105 DIKSDDDRYYNPKAFAGGTTLFQDKLVRSANKIEINGVRHDLRVVDEGH 2153


>SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)
          Length = 722

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 150 NKNDKICFSTNTKKTDKLLESKNKLEYGGKNFELNIHLEGN 28
           +KN K   S +T   + ++++     +GGKN +LN+H  G+
Sbjct: 566 SKNTKPDRSNSTGSQNCVIDNNGNCNHGGKNNDLNLHDRGS 606


>SB_42894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 533

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 524 NLGAIVTSKSAASGKSDDIKFDVGVVENTHFYSSHAVISNSKGTLLDYL 378
           N      +K  A    +  KF+VG++  T FYS   V + S GT L ++
Sbjct: 205 NASRSTRTKLVAQAFRNCAKFEVGLLPLTAFYSERTVFAFSGGTGLSFI 253


>SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24)
          Length = 465

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
 Frame = -2

Query: 626 NADKSNLENYVDIKGYGRYELSGVLLHKNKPNDVNLGAIVTSKSAASGKSDDIKFDVGVV 447
           N  K+   +++ +K  G+     V L KNK  D      V +KSA   +++ + +     
Sbjct: 180 NNPKAKPSDFLFLKVIGKGSFGKVFLSKNKQEDKFYAIKVLNKSAIRKRNEGLHYSFQTK 239

Query: 446 ENTHFYSSHAVISNSKGTLLDY-LLK--ISRGGTPS 348
           +  +F   +         L D+ L K  I R GT S
Sbjct: 240 DKLYFVLDYVNGGEGHIVLTDFGLCKEGIDRSGTTS 275


>SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)
          Length = 1027

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 275 KGNGVVISILKR-YNANLKLM*AFWRRNPCLMQTSTY 168
           KGNG     L R Y+ NL+L    WR N  L  T+ Y
Sbjct: 650 KGNGTDCVALDRVYHINLRLSRTVWRENYRLSNTTQY 686


>SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2)
          Length = 252

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 150 NKNDKICFSTNTKKTDKLLESKNK 79
           N +DK+ FS NT+K+D   E +NK
Sbjct: 72  NCDDKVKFSENTEKSDNETEQQNK 95


>SB_1465| Best HMM Match : PAN (HMM E-Value=0.012)
          Length = 406

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -2

Query: 329 LKDTIAANGEYKVTGNDGKGNGVVISILKRYNANLKLM*AFWRRN 195
           LK  I  NG Y +TG+D K   V         A   L+ AF RRN
Sbjct: 209 LKIGITENGIYTITGSDDKQFSVYCDFRSEPPAAWTLVMAFSRRN 253


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,776,581
Number of Sequences: 59808
Number of extensions: 507333
Number of successful extensions: 1203
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)