Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0284
         (837 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.9  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   6.6  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = -2

Query: 518  GAIVTSKSAASGKSDDIKFDVGVVENTHFYSSHAVISNSKGTLLDYLLKISR-GGTPSGQ 342
            GA+   +SA    +  I   + V    H Y  H  +S     ++D  ++I +  G    +
Sbjct: 2046 GALTDLRSALVNNT--IFASLAVRHGFHKYFLH--LSPGLQEVIDRFVRIQQENGHRITE 2101

Query: 341  LKFVLKDTIAANGEYKVTGNDGKGNG 264
             ++ L D     GEY   G DG G G
Sbjct: 2102 EEYYLPDEDDELGEYGAMGEDGPGEG 2127


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 616 LSAFSIFLWLKPRHRICRHF 675
           + A ++F W+ P   IC H+
Sbjct: 135 MGAVTLFYWIAPIPSICAHY 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,223
Number of Sequences: 2352
Number of extensions: 17043
Number of successful extensions: 33
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)