Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0279
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VNX4 Cluster: CG7145-PA, isoform A; n=4; Diptera|Rep:...    71   3e-11
UniRef50_UPI0000E4A52D Cluster: PREDICTED: hypothetical protein;...    54   2e-06
UniRef50_Q4T8X0 Cluster: Chromosome undetermined SCAF7712, whole...    54   4e-06
UniRef50_UPI00006A1A38 Cluster: Delta-1-pyrroline-5-carboxylate ...    51   2e-05
UniRef50_Q8CJR1 Cluster: Delta-1-pyrroline-5-carboxylate dehydro...    43   0.008
UniRef50_Q8T0Q8 Cluster: GH13449p; n=4; Sophophora|Rep: GH13449p...    42   0.018
UniRef50_Q5BVL1 Cluster: SJCHGC02702 protein; n=2; Schistosoma j...    42   0.018
UniRef50_Q9P8I0 Cluster: Delta-1-pyrroline-5-carboxylate dehydro...    38   0.30 
UniRef50_A5ZRS2 Cluster: Putative uncharacterized protein; n=1; ...    36   0.91 
UniRef50_Q9NKR5 Cluster: Delta-1-pyrroline-5-carboxylate dehydro...    36   1.2  
UniRef50_Q4Q655 Cluster: Putative uncharacterized protein; n=3; ...    34   3.7  
UniRef50_A7S6V7 Cluster: Predicted protein; n=2; Nematostella ve...    33   4.9  
UniRef50_Q2LS25 Cluster: Hypothetical membrane protein; n=1; Syn...    33   8.5  

>UniRef50_Q9VNX4 Cluster: CG7145-PA, isoform A; n=4; Diptera|Rep:
           CG7145-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 574

 Score = 70.5 bits (165), Expect = 3e-11
 Identities = 33/54 (61%), Positives = 38/54 (70%)
 Frame = +1

Query: 511 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDH 672
           NEP+LGY   S+ER+ L + LK TAS  ED+PIVI GK     E RYQVMPHDH
Sbjct: 43  NEPILGYLKDSKERKALEQALKGTASSCEDIPIVIGGKEYKTPEVRYQVMPHDH 96


>UniRef50_UPI0000E4A52D Cluster: PREDICTED: hypothetical protein;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 492

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 26/54 (48%), Positives = 31/54 (57%)
 Frame = +1

Query: 511 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDH 672
           NEP+L Y  GS ER+ + E LKR     ED+P VI GK I  G    +V P DH
Sbjct: 38  NEPILDYAPGSSERKAVEESLKRRWGTQEDIPCVIGGKEIFTGNTETEVAPFDH 91


>UniRef50_Q4T8X0 Cluster: Chromosome undetermined SCAF7712, whole
           genome shotgun sequence; n=3; Tetraodontidae|Rep:
           Chromosome undetermined SCAF7712, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 774

 Score = 53.6 bits (123), Expect = 4e-06
 Identities = 23/58 (39%), Positives = 36/58 (62%)
 Frame = +1

Query: 502 EHHNEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHS 675
           E  NEP+L YR GS ER +L++ L R     E++P V+  +++   + RYQ+ P +HS
Sbjct: 10  EVRNEPILDYREGSGERAELLKALDRVKRSTEEIPCVVGDQHVWTRDVRYQLSPFNHS 67


>UniRef50_UPI00006A1A38 Cluster: Delta-1-pyrroline-5-carboxylate
           dehydrogenase, mitochondrial precursor (EC 1.5.1.12)
           (P5C dehydrogenase) (Aldehyde dehydrogenase 4A1).; n=3;
           Xenopus tropicalis|Rep: Delta-1-pyrroline-5-carboxylate
           dehydrogenase, mitochondrial precursor (EC 1.5.1.12)
           (P5C dehydrogenase) (Aldehyde dehydrogenase 4A1). -
           Xenopus tropicalis
          Length = 510

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +1

Query: 502 EHHNEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHS 675
           E  NEP+L +R+GS ER  L + L    +  E++P V+ G+ +   + RYQV P  HS
Sbjct: 21  EVKNEPILEFRSGSAERAALQQALHELKATTEEIPCVVGGEEVWTKDVRYQVSPFKHS 78


>UniRef50_Q8CJR1 Cluster: Delta-1-pyrroline-5-carboxylate
           dehydrogenase; n=43; cellular organisms|Rep:
           Delta-1-pyrroline-5-carboxylate dehydrogenase -
           Streptomyces coelicolor
          Length = 546

 Score = 42.7 bits (96), Expect = 0.008
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 511 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVM-PHDH 672
           NEPV GY  GS ER  L  +LK  A    D+P  I G+    G  R+ V+ PH+H
Sbjct: 12  NEPVHGYAPGSPERARLEAKLKELADNPIDLPCTIGGEKRMGGGERFDVVQPHNH 66


>UniRef50_Q8T0Q8 Cluster: GH13449p; n=4; Sophophora|Rep: GH13449p -
           Drosophila melanogaster (Fruit fly)
          Length = 614

 Score = 41.5 bits (93), Expect = 0.018
 Identities = 22/53 (41%), Positives = 30/53 (56%)
 Frame = +1

Query: 511 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHD 669
           NE +L Y  GS+ER +L   L    + +E VPIVI G+     E   QV+P+D
Sbjct: 52  NEKLLQYDEGSKERTELETALLGVLNRVEHVPIVINGQEFQAKEDFQQVLPYD 104


>UniRef50_Q5BVL1 Cluster: SJCHGC02702 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC02702 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 224

 Score = 41.5 bits (93), Expect = 0.018
 Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 511 NEPVLGYRAGSRERQDL---IEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHSK 678
           NEPVL Y+ GS ER  L   +  +K TA     VPI I    ++   PR QV P +HSK
Sbjct: 28  NEPVLLYKPGSMERLRLDSTLGTMKLTAP--HRVPICIGSSELSSEHPRKQVWPFEHSK 84


>UniRef50_Q9P8I0 Cluster: Delta-1-pyrroline-5-carboxylate
           dehydrogenase, mitochondrial precursor; n=8;
           Dikarya|Rep: Delta-1-pyrroline-5-carboxylate
           dehydrogenase, mitochondrial precursor - Emericella
           nidulans (Aspergillus nidulans)
          Length = 572

 Score = 37.5 bits (83), Expect = 0.30
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 511 NEPVLGYRAGSRERQDLIEELKRT-ASVIEDVPIVIAGKNITEGEPRYQVMPHDH 672
           NEP   Y AGS +R+ L E L RT  +    VP+VIAGK +       Q  P  H
Sbjct: 37  NEPNKHYAAGSPDRKALQEALARTQRNAPLSVPLVIAGKEVKSSSSLTQSNPASH 91


>UniRef50_A5ZRS2 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 943

 Score = 35.9 bits (79), Expect = 0.91
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 337 ECDLMSGSDYVNESQTGRVTTRVRPRQLKNLFDSNKAV--TFTISYSFLLRENG 182
           +  ++ G +Y+NE QT    TRV      N++D N  +  +  +SYS    +NG
Sbjct: 11  DLQIIQGENYINEFQTRTTKTRVLKSTRGNIYDKNNKLIASNVLSYSLTFEDNG 64


>UniRef50_Q9NKR5 Cluster: Delta-1-pyrroline-5-carboxylate
           dehydrogenase, putative; n=7; Eukaryota|Rep:
           Delta-1-pyrroline-5-carboxylate dehydrogenase, putative
           - Leishmania major
          Length = 560

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +1

Query: 511 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDH 672
           NEP+  +  GS   +  +E  K     + + PI+I GK  T        MP DH
Sbjct: 20  NEPMDNFEPGSVSAKGTLEACKEARGEVRECPIMIGGKPYTSSNIIKATMPSDH 73


>UniRef50_Q4Q655 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 481

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +1

Query: 499 WEHHNEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVI 615
           W+ + +PV     GS + ++L++ELK+T +V E V  V+
Sbjct: 275 WDRYGQPVFYLMLGSVDEENLLKELKQTTAVGESVDAVM 313


>UniRef50_A7S6V7 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 284

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +1

Query: 40  EICEHFAIISCFINLLEAILDRYAKIKNT 126
           ++C+ F +IS  ++L  A+L+RY KI N+
Sbjct: 78  DVCQRFLVISTILHLTTAVLERYFKIVNS 106


>UniRef50_Q2LS25 Cluster: Hypothetical membrane protein; n=1;
           Syntrophus aciditrophicus SB|Rep: Hypothetical membrane
           protein - Syntrophus aciditrophicus (strain SB)
          Length = 294

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +1

Query: 490 ISGWEHHNEPVLGYRAGSRERQDLIEELKRTASVIEDVPIV 612
           ISG E   E V   + G+  R+++IE+L +  S+IED+ ++
Sbjct: 40  ISGKEIKGENVAFIKTGATTREEVIEKLGKPYSIIEDIRVI 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,879,969
Number of Sequences: 1657284
Number of extensions: 12227508
Number of successful extensions: 28040
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 27337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28038
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)