Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0279
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114965-1|AAI14966.1| 1578|Homo sapiens FERM and PDZ domain con...    30   8.8  
AL591470-1|CAI12951.1| 1578|Homo sapiens FERM and PDZ domain con...    30   8.8  
AL513165-5|CAI16156.1| 1578|Homo sapiens FERM and PDZ domain con...    30   8.8  
AB023184-1|BAA76811.1| 1578|Homo sapiens KIAA0967 protein protein.     30   8.8  

>BC114965-1|AAI14966.1| 1578|Homo sapiens FERM and PDZ domain
            containing 1 protein.
          Length = 1578

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 503  SHPEIAASLRR*TTFALANVRDRFSPRL 420
            SHPE++ASLR  T+   A + +  +PR+
Sbjct: 1302 SHPEVSASLRVATSLGFAGMNEMVAPRI 1329


>AL591470-1|CAI12951.1| 1578|Homo sapiens FERM and PDZ domain
            containing 1 protein.
          Length = 1578

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 503  SHPEIAASLRR*TTFALANVRDRFSPRL 420
            SHPE++ASLR  T+   A + +  +PR+
Sbjct: 1302 SHPEVSASLRVATSLGFAGMNEMVAPRI 1329


>AL513165-5|CAI16156.1| 1578|Homo sapiens FERM and PDZ domain
            containing 1 protein.
          Length = 1578

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 503  SHPEIAASLRR*TTFALANVRDRFSPRL 420
            SHPE++ASLR  T+   A + +  +PR+
Sbjct: 1302 SHPEVSASLRVATSLGFAGMNEMVAPRI 1329


>AB023184-1|BAA76811.1| 1578|Homo sapiens KIAA0967 protein protein.
          Length = 1578

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 503  SHPEIAASLRR*TTFALANVRDRFSPRL 420
            SHPE++ASLR  T+   A + +  +PR+
Sbjct: 1302 SHPEVSASLRVATSLGFAGMNEMVAPRI 1329


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,685,908
Number of Sequences: 237096
Number of extensions: 1824590
Number of successful extensions: 3669
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3669
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)