Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0279
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   2.0  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   3.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   4.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.2  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -3

Query: 675 GVIMGHHLISWLAF--CNIFSG 616
           G++MG  +I WL F   N++SG
Sbjct: 338 GIVMGVFIICWLPFFVVNLWSG 359


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 73  FINLLEAILDRYAKIKNTPHF*N*QHSIL 159
           F++ ++ I+D Y  ++NT H     H +L
Sbjct: 280 FLHKMKNIIDYYLVLENTDHTKQLSHDVL 308


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 630 NIFSGNYNWYVFNY*SGS 577
           NIF   Y W  F+Y  GS
Sbjct: 30  NIFQVKYQWKYFDYNFGS 47


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 675 GVIMGHHLISWLAF 634
           GVIMG  LI W+ F
Sbjct: 275 GVIMGVFLICWVPF 288


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 675 GVIMGHHLISWLAF 634
           GVIMG  ++ WL F
Sbjct: 330 GVIMGVFVVCWLPF 343


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 675 GVIMGHHLISWLAF 634
           GVIMG  ++ WL F
Sbjct: 330 GVIMGVFVVCWLPF 343


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 675 GVIMGHHLISWLAF 634
           GVIMG  ++ WL F
Sbjct: 330 GVIMGVFVVCWLPF 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,094
Number of Sequences: 438
Number of extensions: 3429
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)