Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0276
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    38   5e-04
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   2.2  
AY745220-1|AAU93487.1|  101|Anopheles gambiae cytochrome P450 pr...    25   2.9  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   8.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 37.5 bits (83), Expect = 5e-04
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 588 CTQCSYRCQSPAILKIHERVHSGEKPFFVHVCDY 689
           CT+C Y     + LK H R H+GEKPF    C Y
Sbjct: 214 CTECDYASVELSKLKRHIRTHTGEKPFQCPHCTY 247



 Score = 36.3 bits (80), Expect = 0.001
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +3

Query: 525 LKQHSKSCLDEGEKDRAGKFGCTQCSYRCQSPAILKIHERVHSGEKPFFVHVC 683
           LK+H ++    GEK     F C  C+Y       L  H R+H+GEKP+   VC
Sbjct: 227 LKRHIRT--HTGEKP----FQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVC 273



 Score = 29.5 bits (63), Expect = 0.14
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +3

Query: 510 PSKRGLKQHSKSCLDEGEKDRAGKFGCTQCSYRCQSPAILKIHERVHSGEKPFFVHVC 683
           P +   K H+K+   EGEK     + C  C Y   S   L+ H  +H+ +KP+    C
Sbjct: 337 PDRYSYKMHAKT--HEGEKC----YRCEYCPYASISMRHLESHLLLHTDQKPYKCDQC 388



 Score = 27.1 bits (57), Expect = 0.72
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +3

Query: 561 EKDRAGKFGCTQCSYRCQSPAILKIHERVHSGEKPFFVHVCD 686
           ++     + C  C+Y      +L  H + HS ++P    VC+
Sbjct: 120 QQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCE 161



 Score = 25.8 bits (54), Expect = 1.7
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +3

Query: 588 CTQCSYRCQSPAILKIHERVHSGEKPFFVHVCDY 689
           C +C          K+H + H GEK +    C Y
Sbjct: 329 CKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPY 362



 Score = 25.0 bits (52), Expect = 2.9
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 564 KDRAGKFGCTQCSYRCQSPAILKIHERVHSGEKPFFVHVCD 686
           +DR  K  C  C    ++ A L+ H   H+G KP     CD
Sbjct: 151 EDRPHK--CVVCERGFKTLASLQNHVNTHTGTKPHRCKHCD 189


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 412 YQIDYKTESVKLNEDLTLN 468
           + ++Y T +V  N+DLTLN
Sbjct: 482 WSVNYNTSTVMTNKDLTLN 500


>AY745220-1|AAU93487.1|  101|Anopheles gambiae cytochrome P450
           protein.
          Length = 101

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 409 RSTFCFRRSASCSLSAVVSRYFRRH 335
           R T   RR A C L  ++S+ FRR+
Sbjct: 55  RRTCIGRRFAECELQILLSKLFRRY 79


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 346 FRRHLAVSWGRHLADPRTI 290
           +RRH  +S+ RH  D R +
Sbjct: 808 YRRHRRLSYSRHAVDDRDL 826


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,912
Number of Sequences: 2352
Number of extensions: 10965
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)