Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0275
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.64 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.84 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.84 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.84 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -1

Query: 670 VDFQAYFFSYFTSPFAVRLKNESFQSKTCNQNVNNK*FPPFCFL 539
           +DF AYFF+++T  F+   +++ FQ   C+     + +  F F+
Sbjct: 62  MDFIAYFFNFWTILFS---RSDFFQQFECDNEPKLRHYLIFIFV 102


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 127 LIFLVLFSHMLSINKITTLTKRNKLC*MLTECK 29
           +I L+L  H +    +TT+TKRN+ C +L   K
Sbjct: 66  VILLILNVHTI----LTTITKRNQWCKLLENLK 94


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 127 LIFLVLFSHMLSINKITTLTKRNKLC*MLTECK 29
           +I L+L  H +    +TT+TKRN+ C +L   K
Sbjct: 66  VILLILNVHTI----LTTITKRNQWCKLLENLK 94


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 127 LIFLVLFSHMLSINKITTLTKRNKLC*MLTECK 29
           +I L+L  H +    +TT+TKRN+ C +L   K
Sbjct: 386 VILLILNVHTI----LTTITKRNQWCKLLENLK 414


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 491 KREPESILKVRKIYEQQKTKWRKSFV 568
           K +PE I  +R     QKTK  ++F+
Sbjct: 514 KADPEKISAIRNFPVPQKTKHVRAFL 539


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 370  VMSNPENRRRYMEHV 414
            +++NP  RRR++ HV
Sbjct: 1914 LVNNPSARRRFIAHV 1928


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,429
Number of Sequences: 336
Number of extensions: 3342
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)