BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0275
(745 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 4.3
AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin rece... 24 4.3
AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding pr... 24 5.7
AY062190-1|AAL58551.1| 151|Anopheles gambiae cytochrome P450 CY... 23 7.5
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 10.0
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 24.2 bits (50), Expect = 4.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 458 PRRMYRSKWSPKREPESILKVRKIYEQQKTKWRKSFVIYILITCF 592
P YRS ++ +R + +Y+Q K +K +VI L T +
Sbjct: 2013 PNLRYRSAFATRRIGGDQMTEYLVYDQSKRVLKKVYVINTLNTSY 2057
>AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin
receptor protein.
Length = 427
Score = 24.2 bits (50), Expect = 4.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 503 RAHALGSTLTCTFFSAANSLSCVGCAPYKRTCSM*RLLFSGLLITDCM 360
+AH + L C F S AN+L+ V + S + +GL I D +
Sbjct: 53 KAHGIVCLLVCIFGSIANTLNIV-VLTRREMRSPTNAILTGLAIADLL 99
>AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP29 protein.
Length = 176
Score = 23.8 bits (49), Expect = 5.7
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +1
Query: 652 NTLENQRSCCLKCA*EKLRSKN 717
+T+E R+C ++C E++++ N
Sbjct: 78 STIERDRACLMQCFFEEMKATN 99
>AY062190-1|AAL58551.1| 151|Anopheles gambiae cytochrome P450
CYP4H15 protein.
Length = 151
Score = 23.4 bits (48), Expect = 7.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 691 HTSSNSCVDFQAYFFS 644
H ++ SC+ F AY+ S
Sbjct: 10 HDTTTSCISFAAYYLS 25
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 23.0 bits (47), Expect = 10.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 231 LQRSTRPPKPRHLRARLEDR 290
++R PP PR +RAR E R
Sbjct: 1121 MRRRGLPPSPRTVRARHERR 1140
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,822
Number of Sequences: 2352
Number of extensions: 12355
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -