Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0275
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC115006-1|AAI15007.1| 1437|Homo sapiens Wolf-Hirschhorn syndrom... 30 7.6
BC113469-1|AAI13470.1| 1437|Homo sapiens Wolf-Hirschhorn syndrom... 30 7.6
BC101717-1|AAI01718.1| 1437|Homo sapiens WHSC1L1 protein, isofor... 30 7.6
BC062631-1|AAH62631.1| 645|Homo sapiens Wolf-Hirschhorn syndrom... 30 7.6
BC012059-1|AAH12059.1| 645|Homo sapiens Wolf-Hirschhorn syndrom... 30 7.6
AK127594-1|BAC87049.1| 320|Homo sapiens protein ( Homo sapiens ... 30 7.6
AK022560-1|BAB14099.1| 645|Homo sapiens protein ( Homo sapiens ... 30 7.6
AJ295992-1|CAC28352.1| 645|Homo sapiens putative chromatin modu... 30 7.6
AJ295991-1|CAC28351.1| 1388|Homo sapiens Putative Chromatin modu... 30 7.6
AJ295990-1|CAC28350.1| 1437|Homo sapiens putative chromatin modu... 30 7.6
AF332469-1|AAK00355.1| 1437|Homo sapiens putative protein WHSC1L... 30 7.6
AF332468-1|AAK00354.1| 645|Homo sapiens putative protein WHSC1L... 30 7.6
>BC115006-1|AAI15007.1| 1437|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1-like 1 protein.
Length = 1437
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>BC113469-1|AAI13470.1| 1437|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1-like 1 protein.
Length = 1437
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>BC101717-1|AAI01718.1| 1437|Homo sapiens WHSC1L1 protein, isoform
long protein.
Length = 1437
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>BC062631-1|AAH62631.1| 645|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1-like 1 protein.
Length = 645
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>BC012059-1|AAH12059.1| 645|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1-like 1 protein.
Length = 645
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>AK127594-1|BAC87049.1| 320|Homo sapiens protein ( Homo sapiens
cDNA FLJ45689 fis, clone FCBBF3024911, highly similar
to Homo sapiens Wolf-Hirschhorn syndrome candidate
1-like 1 (WHSC1L1). ).
Length = 320
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 91 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 150
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 151 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 186
>AK022560-1|BAB14099.1| 645|Homo sapiens protein ( Homo sapiens
cDNA FLJ12498 fis, clone NT2RM2001668, weakly similar to
Homo sapiens putative WHSC1 protein (WHSC1) mRNA,
alternative ).
Length = 645
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>AJ295992-1|CAC28352.1| 645|Homo sapiens putative chromatin
modulator protein.
Length = 645
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>AJ295991-1|CAC28351.1| 1388|Homo sapiens Putative Chromatin
modulator protein.
Length = 1388
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>AJ295990-1|CAC28350.1| 1437|Homo sapiens putative chromatin
modulator protein.
Length = 1437
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>AF332469-1|AAK00355.1| 1437|Homo sapiens putative protein WHSC1L1l
protein.
Length = 1437
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
>AF332468-1|AAK00354.1| 645|Homo sapiens putative protein WHSC1L1s
protein.
Length = 645
Score = 30.3 bits (65), Expect = 7.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 120 KIKKGSHITRLREXDVYSVCKGSLPRPLATSLTR-RHALQRSTRPPKPRHLRARLEDRSA 296
K+K I RE S+C L A+ T+ +H ++ R +H +R E+R +
Sbjct: 154 KLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKS 213
Query: 297 DAQEQIDPTEDH*SSKGNVTVHTVRNEQP*EQEALHGTRP 416
+++P E ++ N V TV +E+P E+ L P
Sbjct: 214 HKIPKLEPEE---QNRPNERVDTV-SEKPREEPVLKEEAP 249
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,327,020
Number of Sequences: 237096
Number of extensions: 1891523
Number of successful extensions: 4146
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4146
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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