Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0275
         (745 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g00080.1 68417.m00008 invertase/pectin methylesterase inhibit...    30   1.4  
At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664...    28   5.7  
At3g54080.1 68416.m05979 expressed protein                             28   7.5  
At3g06340.1 68416.m00731 DNAJ heat shock N-terminal domain-conta...    28   7.5  

>At4g00080.1 68417.m00008 invertase/pectin methylesterase inhibitor
           family protein low similarity to pectinesterase from
           Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana
           SP|Q42534; contains Pfam profile PF04043: Plant
           invertase/pectin methylesterase inhibitor
          Length = 209

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +1

Query: 343 KETSQYIQS-VMSNPENRRRYMEHVRLYGAQPTQLKLLAAEKNVQVKVEPKA*ARIY 510
           +  S+Y++S  + NP +  R+     LY A+ T+  LL   KN++  + P+  A ++
Sbjct: 51  RSMSRYVRSRAVQNPRDLARFALKASLYRAKYTKAFLLKEVKNLETTLRPQYYASVH 107


>At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664:
           Protein of unknown function (DUF810)
          Length = 985

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +1

Query: 334 DLQKETSQYIQSVMSNPENRRRYMEHVRLYGAQPTQLKLLAAEKNVQVKVEPKA*ARIYS 513
           D+  +   Y+Q+ +     R  +  +V+ +G +   L LLA E  V  KVE      ++S
Sbjct: 488 DVSDKIQSYVQNSIKGACARAAHFAYVKSHGERTHALALLANELTVIAKVEINEFVPVFS 547

Query: 514 E 516
           +
Sbjct: 548 K 548


>At3g54080.1 68416.m05979 expressed protein
          Length = 350

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +2

Query: 431 NLRNLSY*QPRRMYRSKWSPKREPESILKVRKIYEQQKTKWRKSFVIYILITCF 592
           NL + S       Y   W+P    E + K  ++ +++  K R S  ++ ++TCF
Sbjct: 234 NLHSWSLEVRHSEYEHSWAPVLLEEQLRKEEQLRKEEAAKKRTSDRMWEVVTCF 287


>At3g06340.1 68416.m00731 DNAJ heat shock N-terminal
           domain-containing protein contains Pfam profile PF00226
           DnaJ domain
          Length = 673

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 524 YELSE*IRAHALGSTLTCTFFSAANSLSCVGC 429
           YE  E +  HA G+T++  F S     +CV C
Sbjct: 565 YEFVEILSDHAEGATVSVGFLSKVQGFNCVFC 596


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,514,181
Number of Sequences: 28952
Number of extensions: 277080
Number of successful extensions: 676
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)