Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0274
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 97 2e-20
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 70 2e-12
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 70 2e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 63 2e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 63 2e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 63 2e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 57 2e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 57 2e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 57 2e-08
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 39 0.004
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 39 0.004
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 39 0.004
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.010
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.010
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.013
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 37 0.018
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 36 0.041
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 36 0.041
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 36 0.041
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.041
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 35 0.054
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 35 0.054
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 35 0.054
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.095
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.095
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 34 0.13
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.51
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.67
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 31 0.67
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 31 0.67
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.2
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 30 2.0
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.7
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 3.6
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.6
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 29 4.7
Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 28 6.2
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 6.2
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 28 6.2
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 28 6.2
AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical ... 28 6.2
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 28 8.2
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/119 (37%), Positives = 61/119 (51%)
Frame = +3
Query: 147 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCNG 326
S CY C TGHF+R+C +GG G C++ GH++RDC G
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSE-GGSGG 93
Query: 327 TGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGT 503
G E +S CYNC ++GHI+R C E G + + CY C ++GHISR+CP T
Sbjct: 94 YGGRGGE-GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQT 150
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCP----EGGRE--SATQTCYNCNKSGHISRNCPDG 500
+CY C + GHI+RNCP +GGR TCYNC ++GH SR+CP G
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKG 53
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEAD 305
CY C R+GH +RECT+ G + + ++C+ TGH +RDC + +
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPSQTN 151
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 444 QTCYNCNKSGHISRNCPDG 500
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 503 QDCYVXGKPGHISRECDEARN*PQPPC 583
Q CY G+ GHISREC E+ + + C
Sbjct: 107 QKCYNCGRSGHISRECTESGSAEEKRC 133
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 69.7 bits (163), Expect = 2e-12
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKE---EADRCYRCN 323
C+ C GH ++EC + V R C + + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 324 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 494
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 495 DGTK 506
K
Sbjct: 682 TRPK 685
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 255 SXNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGG 428
S N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 556 SDNQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ-- 610
Query: 429 RESATQTCYNCNKSGHISRNC 491
C NC GH + +C
Sbjct: 611 PRVPRGPCRNCGIEGHFAVDC 631
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADR------CY 314
C C GHFA +C Q V R C + + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 315 RCNGTGHIARECAQSPDE 368
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 497 RHQDCYVXGKPGHISRECDEARN*PQPPCLPYNQL 601
R + C+ G+ GHIS+ECD+ + P+ PC QL
Sbjct: 568 RPRGCHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 69.7 bits (163), Expect = 2e-12
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKE---EADRCYRCN 323
C+ C GH ++EC + V R C + + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 324 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 494
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 495 DGTK 506
K
Sbjct: 682 TRPK 685
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 255 SXNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGG 428
S N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 556 SDNQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ-- 610
Query: 429 RESATQTCYNCNKSGHISRNC 491
C NC GH + +C
Sbjct: 611 PRVPRGPCRNCGIEGHFAVDC 631
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADR------CY 314
C C GHFA +C Q V R C + + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 315 RCNGTGHIARECAQSPDE 368
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 497 RHQDCYVXGKPGHISRECDEARN*PQPPCLPYNQL 601
R + C+ G+ GHIS+ECD+ + P+ PC QL
Sbjct: 568 RPRGCHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 62.9 bits (146), Expect = 2e-10
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +3
Query: 150 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFSXNRTGHFARDCKEE 299
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 300 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCN 464
+ + N G + Q E + C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 465 KSGHISRNCPDGTK 506
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 150 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCY 314
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 315 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 419
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 506
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCNGT- 329
C+ C + GH + +C + R+ C++ + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 330 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 467
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 468 SGHISRNCPDGTK 506
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 48.0 bits (109), Expect = 7e-06
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Frame = +3
Query: 237 QREKCFSXNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 380
+ CF+ + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 381 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPD 497
G EG E C+NC GH S CP+
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 267 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 437
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 438 ATQTCYNCNKSG 473
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 237 QREKCFSXNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 356
+ CF+ + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 35.1 bits (77), Expect = 0.054
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 22/140 (15%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCN--- 323
C+ C + GH + +C + R+ C++ + GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 324 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 446
GTG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 447 TCYNCNKSGHISRNCPDGTK 506
C+NC + GH S +CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKK 391
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 429 RESATQTCYNCNKSGHISRNCPDGTK 506
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 482 PQLSRRHQDCYVXGKPGHISRECDEAR 562
P+ R + CY +PGH SR+C E R
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 482 PQLSRRHQDCYVXGKPGHISRECDEAR 562
P+ R + CY +PGH SR+C E R
Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDCPEER 415
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 62.9 bits (146), Expect = 2e-10
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +3
Query: 150 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFSXNRTGHFARDCKEE 299
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 300 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCN 464
+ + N G + Q E + C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 465 KSGHISRNCPDGTK 506
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 150 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCY 314
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 315 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 419
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 506
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCNGT- 329
C+ C + GH + +C + R+ C++ + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 330 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 467
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 468 SGHISRNCPDGTK 506
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 48.0 bits (109), Expect = 7e-06
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Frame = +3
Query: 237 QREKCFSXNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 380
+ CF+ + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 381 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPD 497
G EG E C+NC GH S CP+
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 267 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 437
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 438 ATQTCYNCNKSG 473
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 237 QREKCFSXNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 356
+ CF+ + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 35.1 bits (77), Expect = 0.054
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 22/140 (15%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCN--- 323
C+ C + GH + +C + R+ C++ + GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 324 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 446
GTG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 447 TCYNCNKSGHISRNCPDGTK 506
C+NC + GH S +CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKK 391
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 429 RESATQTCYNCNKSGHISRNCPDGTK 506
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 482 PQLSRRHQDCYVXGKPGHISRECDEAR 562
P+ R + CY +PGH SR+C E R
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 482 PQLSRRHQDCYVXGKPGHISRECDEAR 562
P+ R + CY +PGH SR+C E R
Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDCPEER 415
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 62.9 bits (146), Expect = 2e-10
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +3
Query: 150 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFSXNRTGHFARDCKEE 299
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 300 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCN 464
+ + N G + Q E + C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 465 KSGHISRNCPDGTK 506
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 150 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCY 314
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 315 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 419
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 506
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCNGT- 329
C+ C + GH + +C + R+ C++ + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 330 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 467
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 468 SGHISRNCPDGTK 506
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 48.0 bits (109), Expect = 7e-06
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Frame = +3
Query: 237 QREKCFSXNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 380
+ CF+ + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 381 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPD 497
G EG E C+NC GH S CP+
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 267 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 437
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 438 ATQTCYNCNKSG 473
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +3
Query: 237 QREKCFSXNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 356
+ CF+ + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 35.1 bits (77), Expect = 0.054
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 22/140 (15%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCN--- 323
C+ C + GH + +C + R+ C++ + GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 324 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 446
GTG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 447 TCYNCNKSGHISRNCPDGTK 506
C+NC + GH S +CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKK 391
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 429 RESATQTCYNCNKSGHISRNCPDGTK 506
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 482 PQLSRRHQDCYVXGKPGHISRECDEAR 562
P+ R + CY +PGH SR+C E R
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 482 PQLSRRHQDCYVXGKPGHISRECDEAR 562
P+ R + CY +PGH SR+C E R
Sbjct: 389 PKKEREPRVCYNCQQPGHNSRDCPEER 415
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Frame = +3
Query: 150 VCYKCNRTGHFARECTQ--------GGVVSRDSGF-NRQREKCFSXNRTGHFARDCKEEA 302
VCY C + GH +RECT+ G +GF N F + G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGD--GGFGGGEERGP 241
Query: 303 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 419
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 55.2 bits (127), Expect = 5e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 506
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/108 (30%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Frame = +3
Query: 225 GFNRQREKCFSXNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SPDEPSC-- 377
G + CF+ + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 378 --------YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 497
N G GG E C+NC GH S CP+
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEAD-RCYRCNGT 329
C+ C + GH + +C + R+ C++ + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 330 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 461
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 462 NKSGHISRNCPDGTK 506
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 482 PQLSRRHQDCYVXGKPGHISRECDEAR 562
P+ R + CY +PGH SREC E R
Sbjct: 176 PRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 423 GGRESATQTCYNCNKSGHISRNCPDGTK 506
GG E C+NC + GH S +CP+ K
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRK 178
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Frame = +3
Query: 150 VCYKCNRTGHFARECTQ--------GGVVSRDSGF-NRQREKCFSXNRTGHFARDCKEEA 302
VCY C + GH +RECT+ G +GF N F + G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGD--GGFGGGEERGP 241
Query: 303 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 419
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 55.2 bits (127), Expect = 5e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 506
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/108 (30%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Frame = +3
Query: 225 GFNRQREKCFSXNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SPDEPSC-- 377
G + CF+ + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 378 --------YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 497
N G GG E C+NC GH S CP+
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEAD-RCYRCNGT 329
C+ C + GH + +C + R+ C++ + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 330 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 461
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 462 NKSGHISRNCPDGTK 506
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 482 PQLSRRHQDCYVXGKPGHISRECDEAR 562
P+ R + CY +PGH SREC E R
Sbjct: 176 PRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 423 GGRESATQTCYNCNKSGHISRNCPDGTK 506
GG E C+NC + GH S +CP+ K
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRK 178
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Frame = +3
Query: 150 VCYKCNRTGHFARECTQ--------GGVVSRDSGF-NRQREKCFSXNRTGHFARDCKEEA 302
VCY C + GH +RECT+ G +GF N F + G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGD--GGFGGGEERGP 241
Query: 303 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 419
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 55.2 bits (127), Expect = 5e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 506
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/108 (30%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Frame = +3
Query: 225 GFNRQREKCFSXNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SPDEPSC-- 377
G + CF+ + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 378 --------YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 497
N G GG E C+NC GH S CP+
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEAD-RCYRCNGT 329
C+ C + GH + +C + R+ C++ + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 330 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 461
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 462 NKSGHISRNCPDGTK 506
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 482 PQLSRRHQDCYVXGKPGHISRECDEAR 562
P+ R + CY +PGH SREC E R
Sbjct: 176 PRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 423 GGRESATQTCYNCNKSGHISRNCPDGTK 506
GG E C+NC + GH S +CP+ K
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRK 178
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 54.4 bits (125), Expect = 8e-08
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Frame = +3
Query: 138 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADR--- 308
++ S C+ C GH +C + S D CF H +CK++ +
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278
Query: 309 ---CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRESA 440
C+ C GHI+R+C Q+ PD C C H+ R+CPE + A
Sbjct: 279 YATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELAAQKA 330
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Frame = +3
Query: 201 GGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 371
G V D+ +R K R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 372 SCYNCNKTGHIARNCPEGGRESATQ-TCYNCNKSGHISRNC 491
C+ C H C + G + TC+ C + GHISR+C
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDC 295
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 300 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 470
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 471 GHISRNCP 494
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 300 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 422
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 653 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 692
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 144 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADR-CYRC 320
S C C + G C++ S+D+ +KC ++G C + +R C+RC
Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680
Query: 321 NGTGHIARECAQSPDEPS 374
N GHIA C + + S
Sbjct: 681 NEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 300 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 470
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 471 GHISRNCP 494
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 300 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 422
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 556 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 595
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 144 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADR-CYRC 320
S C C + G C++ S+D+ +KC ++G C + +R C+RC
Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583
Query: 321 NGTGHIARECAQSPDEPS 374
N GHIA C + + S
Sbjct: 584 NEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 300 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 470
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 471 GHISRNCP 494
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 300 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 422
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 567 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 606
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 144 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADR-CYRC 320
S C C + G C++ S+D+ +KC ++G C + +R C+RC
Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594
Query: 321 NGTGHIARECAQSPDEPS 374
N GHIA C + + S
Sbjct: 595 NEMGHIAWNCPKKNENTS 612
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 375 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 491
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 270 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 425
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 375 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 491
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 270 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 425
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 444 QTCYNCNKSGHISRNCPDG 500
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.041
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCPEG 425
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.51
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 138 MSSSVCYKCNRTGHFARECTQG 203
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +3
Query: 279 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 458
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 459 CNKSGHISRNCPDG 500
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 31.9 bits (69), Expect = 0.51
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 138 MSSSVCYKCNRTGHFARECTQGGV 209
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 249 CFSXNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 413
C + + GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 414 CPEGGRESATQTCY 455
C +G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +3
Query: 111 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDC 290
A +KP + C+ C+ GH A C +R + + R D
Sbjct: 192 AVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDL-------SLIPDK 244
Query: 291 KEEAD-RCYRCNGTGHIAREC 350
K +D CY+C GH A C
Sbjct: 245 KNLSDVTCYKCGEKGHYANRC 265
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 306 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 434
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 375 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 497
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 113 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 306 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 434
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 375 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 497
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 306 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 434
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 375 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 497
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 306 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 434
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 375 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 497
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 309 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 473
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.38
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 369 PSCYNCNKTGHIARNCPEGGRES 437
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 3.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 450 CYNCNKSGHISRNCPDGT 503
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 245
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 35.1 bits (77), Expect = 0.054
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -1
Query: 507 SWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNTTARPGSVRTRALCA 331
S C S G CG+TCC APP S CG P C C V T C
Sbjct: 64 SGCGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCK 112
Query: 330 PCRYICSN 307
C+ +C+N
Sbjct: 113 CCQPVCTN 120
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.054
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 506
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 34.7 bits (76), Expect = 0.072
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 249 CFSXNRTGHFARDCKEEADRCYRCNGTGHIARECA 353
CF+ + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 300 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 455
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 144 SSVCYKCNRTGHFARECTQGGVVSRDSGF-NRQREKCFSXNRTG 272
S+ C+ C + GH A EC+ + G N + +C S ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.054
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 372 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 506
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 34.7 bits (76), Expect = 0.072
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 249 CFSXNRTGHFARDCKEEADRCYRCNGTGHIARECA 353
CF+ + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 300 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 455
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 144 SSVCYKCNRTGHFARECTQGGVVSRDSGF-NRQREKCFSXNRTG 272
S+ C+ C + GH A EC+ + G N + +C S ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.095
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 309 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 488
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.095
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 309 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 488
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -1
Query: 498 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNTTARPGSVRTRA 340
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 339 LCAPCRYICSNGQPLP 292
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 KCFSXNRTGHFARDCKEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNCP 419
K F +R + D + + + R+C Q +P + C+ C++ GH +CP
Sbjct: 1312 KVFINSRAVFMSEKPPMNRDHTFLSSYQHQLLRKCNQGSAPTDRQCHQCHRIGHFVESCP 1371
Query: 420 EGGRESATQTCYNCNKSGHISRNCPDG 500
+ + + N + R+ G
Sbjct: 1372 QRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVV--SRDSGFNRQREKCFSXNRTGHFARDCKEEADR 308
C++C+R GHF C Q + +R + + N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 360 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 494
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +3
Query: 309 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 422
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.67
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Frame = -1
Query: 531 PGLPXT*QSWCRR-DSCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA-- 367
P + Q+ C+ S +C TC S S+ TP P + V+C PSC +C +
Sbjct: 86 PACQQSCQNQCQSAPSVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVV 143
Query: 366 -RPGSVRTRALC-APCRYICSNGQPL-PCNPSQSVLC 265
P +V+ C C+ C QP+ C P C
Sbjct: 144 QTPAAVQCVPQCQQQCQQQCVQTQPIQQCQPQCQQQC 180
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 31.5 bits (68), Expect = 0.67
Identities = 26/91 (28%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Frame = -1
Query: 510 QSWCRRDSCG-----RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNTTARPGSVR 349
QS C + +C +C C ++ PP SS C SC C
Sbjct: 277 QSSCVQQACAPACQPKCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMPQCTPQCVQQQTI 336
Query: 348 TRALCAP-CRYIC-SNGQPL-PCNPSQSVLC 265
A C P C+ C SN Q + C PS C
Sbjct: 337 CAAACQPSCQSSCSSNAQCVQACLPSCESSC 367
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -1
Query: 486 CGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAP 328
C +C TC ++ Q AP ++ P C C TT + + + CAP
Sbjct: 174 CQQCQNTCQQFAPVCQQQCAP--QCTISSAPQCQQCQTTCQQFAPVCQQQCAP 224
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Frame = -1
Query: 531 PGLPXT*QSWCRR-DSCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA-- 367
P + Q+ C+ S +C TC S S+ TP P + V+C PSC +C +
Sbjct: 86 PACQQSCQNQCQSAPSVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVV 143
Query: 366 -RPGSVRTRALC-APCRYICSNGQPL-PCNPSQSVLC 265
P V+ C C+ C QP+ C P C
Sbjct: 144 QTPAPVQCVPQCQQQCQQQCVQTQPIQQCQPQCQQQC 180
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 501 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 364
CR C C RTCC + T P CG CC C R
Sbjct: 79 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 121
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 501 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 364
CR C C RTCC + T P CG CC C R
Sbjct: 82 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 124
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = -1
Query: 471 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSC----NTTARPGSVRTRALCA-PCRY--- 319
RTCC A+ P PP P+ CC T R G C PC Y
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 318 --ICSNGQPLPCNPSQ 277
C+ GQ C P Q
Sbjct: 190 PTCCNQGQKACCPPEQ 205
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = -1
Query: 585 RQGGCG*FRASSHSREMWPGLPXT*QSWCRRDSCGRCGRTCCSYSRSASQTPA----PPR 418
RQGGCG G C R C C R CC+ R+ T P
Sbjct: 59 RQGGCGCCGCGCGCCGCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPC 118
Query: 417 DSSVRCGPSCCSCNTTAR 364
CG CC C R
Sbjct: 119 CCGCGCGCGCCGCGGGGR 136
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Frame = -1
Query: 486 CG--RCGRTCCSYSRSASQTPAPPRDSSVRCGPS-----CCSCNTTARPGSVRTRALCAP 328
CG R +CC Y A P PP +S CGPS CC P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPP-PASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
Query: 327 CRYICSNGQPLPCNP 283
+C P+P NP
Sbjct: 130 SPLVCCKQAPVPENP 144
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 5/81 (6%)
Frame = -1
Query: 489 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSC---CS--CNTTARPGSVRTRALCAPC 325
+C +C +C + + + +C P C C C T A C
Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 324 RYICSNGQPLPCNPSQSVLCG 262
C+ + C P Q+ CG
Sbjct: 291 NQSCNQPAQMACQPMQNSQCG 311
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 471 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA 340
RTCC SA+ P+ S + C P CNT AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 450 CYNCNKSGHISRNCP 494
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 375 CYNCNKTGHIARNCPE 422
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 279 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 422
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -1
Query: 501 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 364
CR C C RTCC +R + CG CC C R
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGCGGGGR 121
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 501 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 364
CRR C C RTCC + T P CG CC C R
Sbjct: 95 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 135
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Frame = -1
Query: 489 SCGR-CGRTC-------CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRAL 337
SC R C R C S S++ +QTP + G C S C+ T R S R
Sbjct: 122 SCNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCR-SSCSNRVS 180
Query: 336 CAPCRYICSNGQPLPCNPSQS 274
+ C C N C PSQS
Sbjct: 181 QSTCDATCQNTCSSMC-PSQS 200
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 501 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 364
CRR C C RTCC + T P CG CC C R
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 136
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 294 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 401
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/85 (28%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Frame = -1
Query: 501 CRRDSCGRCGRTC-----CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRA 340
C CG C C R+ Q+ R P+C S C+ G T
Sbjct: 448 CHDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPG 504
Query: 339 LCAPCRYICSNGQPLPCNPSQSVLC 265
CR C G PCN + SV+C
Sbjct: 505 KNHHCREKCHEGPCPPCNLNTSVIC 529
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -1
Query: 498 RRDSCGRCGRTCCSYSRSASQTPAP-PRDSSVR-CGPSCCSCNTTARPGSVRTRALCAPC 325
R+ C R G S + SQ+P R+ + R CG SC TT RP + + + C
Sbjct: 88 RQAQCSRPGTGFGSSTPFPSQSPQRCGRNETFRTCGSSCEPSCTTPRPQACTMQCIVNVC 147
Query: 324 RYICSNG 304
+ CS G
Sbjct: 148 Q--CSEG 152
>Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical
protein F23B2.10 protein.
Length = 393
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +3
Query: 141 SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEAD-RCYR 317
SS +C CN+ F +C + ++ FS + F D KE + C +
Sbjct: 41 SSDICSICNQIDSFGVKCINRSAME----MVEMKKNAFSFSDIWIFKFDPKEHFNGPCSK 96
Query: 318 CNGTGHIARECAQS 359
CN + R C S
Sbjct: 97 CNDYSTMLRVCTNS 110
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 426 GRESATQTCYNCNKSGHISRNCP 494
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 426 GRESATQTCYNCNKSGHISRNCP 494
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +3
Query: 156 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCNGTGH 335
Y C G+ A + Q + + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 336 IAREC 350
C
Sbjct: 338 NDGRC 342
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +3
Query: 156 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCNGTGH 335
Y C G+ A + Q + + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 336 IAREC 350
C
Sbjct: 338 NDGRC 342
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -1
Query: 510 QSWCRRDSCGRCGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNTTARPGSVRTRALC 334
Q+ C RC TC + + P P PR S+ C PSC P V+ +LC
Sbjct: 230 QANCIPQCMPRCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLC 281
Query: 333 -APCRYICSN 307
CR +C+N
Sbjct: 282 PQQCRPMCTN 291
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +3
Query: 156 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCNGTGH 335
Y C G+ A + Q + + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 336 IAREC 350
C
Sbjct: 338 NDGRC 342
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFSXNRTGHFARDCKEEADRCYRCN-GT 329
CY C + GH A EC + D N +R+ + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 330 GHIARECAQSPDEPS 374
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
>AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical
protein Y46H3D.8 protein.
Length = 247
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -1
Query: 528 GLPXT*QSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCS--CNTTARPGS 355
GL ++C++ +C RC + + S S+S + DSS C + C T +
Sbjct: 176 GLQDFVNTYCQK-TCSRCASSTTTASSSSSSCTSYTADSSSACASWAANGFCTNTFYTAA 234
Query: 354 VRTRALCAPCRYIC 313
R ++ CA +C
Sbjct: 235 TR-KSYCATTCKLC 247
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +3
Query: 243 EKCFSXNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 422
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 423 GGRESATQ-TCYNCNK 467
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +3
Query: 243 EKCFSXNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 422
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 423 GGRESATQ-TCYNCNK 467
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 589 LQSTMYIMMPRTDDKXXTPRATHDNRLQYRCRSASAPQT 705
L TM ++ + K T A HD++ QY SA PQT
Sbjct: 303 LFETMTSVLSGGNRKVPTSSAAHDDQSQYAPASAGRPQT 341
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 486 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 400
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 589 LQSTMYIMMPRTDDKXXTPRATHDNRLQYRCRSASAPQT 705
L TM ++ + K T A HD++ QY SA PQT
Sbjct: 303 LFETMTSVLSGGNRKVPTSSAAHDDQSQYAPASAGRPQT 341
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +3
Query: 153 CYKCNRTGHFARECTQGGVVSRDSGFNRQ 239
C+ C GH AR C + + G+ Q
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQ 604
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,623,447
Number of Sequences: 27780
Number of extensions: 323399
Number of successful extensions: 1499
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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