Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0273
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 148 5e-36
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 99 4e-21
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 96 3e-20
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 96 3e-20
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 96 3e-20
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 96 3e-20
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 96 3e-20
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 96 3e-20
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 96 3e-20
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 96 3e-20
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 69 3e-12
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 53 2e-07
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 53 2e-07
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 53 2e-07
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 53 2e-07
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.013
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.013
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 36 0.041
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ... 30 2.0
AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical ... 29 4.7
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 148 bits (358), Expect = 5e-36
Identities = 60/87 (68%), Positives = 76/87 (87%)
Frame = +2
Query: 248 QTGSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREK 427
Q ML+++YPM+NG+VRNW+DM HVWD+TFGP K+++DPKE K+LLTEPP+NP NREK
Sbjct: 63 QLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREK 122
Query: 428 MIEVMFEKYEFDSAYVAIQAVLTLYAQ 508
M +VMFE+Y F+S YVA+QAVLTLYAQ
Sbjct: 123 MFQVMFEQYGFNSIYVAVQAVLTLYAQ 149
Score = 109 bits (262), Expect = 2e-24
Identities = 47/70 (67%), Positives = 60/70 (85%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
MD +GRKVIV DNGTGFVKCG+AG+NFPA IFPSMVGRPI+R+ ++G+I++KDLMVG+E
Sbjct: 1 MDSQGRKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
Query: 243 ASKLDPCLKL 272
S+L L +
Sbjct: 61 CSQLRQMLDI 70
Score = 107 bits (257), Expect = 8e-24
Identities = 50/79 (63%), Positives = 55/79 (69%)
Frame = +1
Query: 508 GLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSAD 687
GL+ THICPVYE FAL HLTRRLDIAGRDIT+Y R Y FNHSAD
Sbjct: 150 GLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSAD 209
Query: 688 FETVKMMKEKLCYIRYNIE 744
FETV+ MKEKLCYI Y++E
Sbjct: 210 FETVRQMKEKLCYIAYDVE 228
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 98.7 bits (235), Expect = 4e-21
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Frame = +2
Query: 170 RQADHTRRKQNRRY*C*GLDG----G**SIQTGSMLEVSYPMENGVVRNWEDMCHVWDYT 337
R A+ R + R GLDG G + + + YPME+G+V NW DM +W+Y
Sbjct: 33 RFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYI 92
Query: 338 FGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYEFDSAYVAIQAVLTLYA 505
FG ++ + P+E +LLT+ P+NP KNRE+ E+ FE + + Y+ +QAVL+LYA
Sbjct: 93 FGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYA 148
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+ + FA+ H +R+D+AGRD+T Y Y F+ S +FE V+ MKE CY+
Sbjct: 164 THAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYL 223
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 87 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
+V DNG+G +K GFAG P F + VGRP G +D D+ +G +A
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYH-RVMAGGLD-GDIFIGPKA 61
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYA 145
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 730 RYNIE 744
+ E
Sbjct: 221 ALDFE 225
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYA 145
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 730 RYNIE 744
+ E
Sbjct: 221 ALDFE 225
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYA 145
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 730 RYNIE 744
+ E
Sbjct: 221 ALDFE 225
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYA 145
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 730 RYNIE 744
+ E
Sbjct: 221 ALDFE 225
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYA 145
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 730 RYNIE 744
+ E
Sbjct: 221 ALDFE 225
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYA 145
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 730 RYNIE 744
+ E
Sbjct: 221 ALDFE 225
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D ++ DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYA 145
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 730 RYNIE 744
+ E
Sbjct: 221 ALDFE 225
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 21 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 79
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 80 MFETFNTPAMYVAIQAVLSLYA 101
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 117 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 176
Query: 730 RYNIE 744
+ E
Sbjct: 177 ALDFE 181
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 51 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 109
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 110 MFETFNTPAMYVAIQAVLSLYA 131
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 147 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 206
Query: 730 RYNIE 744
+ E
Sbjct: 207 ALDFE 211
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 117 KCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
+ GFAG + P +FPS+VGRP R + + + KD VGDEA
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 45
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYA 145
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH RLD+AGRD+T Y R Y+F +A+ E V+ +KEKLCY+
Sbjct: 161 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 220
Query: 730 RYNIE 744
+ E
Sbjct: 221 ALDFE 225
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/82 (48%), Positives = 60/82 (73%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ + P+E +LLTE P+NP NREKM ++
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKSNREKMTQI 122
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YV IQAVL+LYA
Sbjct: 123 MFETFNTPAMYVNIQAVLSLYA 144
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH P+YE +ALPH +RLD+AGRD+T Y R Y F +A+ E V+ +KEKLCY+
Sbjct: 160 THTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYV 219
Query: 730 RYNIE 744
++ E
Sbjct: 220 AHDFE 224
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +3
Query: 87 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
+V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDEA
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 58
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +2
Query: 269 VSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFE 448
V YP+ +G+V +W+ M W+ + +P++ LLTEPP+N +NRE E+MFE
Sbjct: 81 VKYPIRHGIVEDWDLMERYWEQCIF-KYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 449 KYEFDSAYVAIQAVLTLYA 505
+ Y+A+QAVL L A
Sbjct: 140 SFNVPGLYIAVQAVLALTA 158
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH PV + + + + + IAGRDIT + R + +E KM+KEK CY+
Sbjct: 182 THCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYV 241
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Frame = +3
Query: 90 VCDNGTGFVKCGFAGSNFPAFIFPSMV---------GRPIIRAENKIG-DIDVKDLMVGD 239
V DNGTG+ K G+AG+ P FI PS + +R N++G ID D +GD
Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGD 69
Query: 240 EA 245
EA
Sbjct: 70 EA 71
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDM 316
+L + YP+E+G+V NW+DM
Sbjct: 65 ILTLKYPIEHGIVTNWDDM 83
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDM 316
+L + YP+E+G+V NW+DM
Sbjct: 65 ILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDM 316
+L + YP+E+G+V NW+DM
Sbjct: 65 ILTLKYPIEHGIVTNWDDM 83
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
M D +V DNG+G K GFAG + P +FPS+VGRP R + + + KD VGDE
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58
Query: 243 A 245
A
Sbjct: 59 A 59
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDM 316
+L + YP+E+G+V NW+DM
Sbjct: 65 ILTLKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/76 (28%), Positives = 45/76 (59%)
Frame = +2
Query: 281 MENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYEF 460
M+ G++ +WE + ++++ + + +P E +L +E N REK+ E+MFEK++
Sbjct: 94 MKEGLIEDWELFEKIVEHSY-ENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQV 152
Query: 461 DSAYVAIQAVLTLYAQ 508
+ Y++ VL+ +AQ
Sbjct: 153 PAYYLSKNVVLSCFAQ 168
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 278 PMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYE 457
P+E G V NW+ +W+ TFG M+V+ ++I LT+ + E++F+ +
Sbjct: 62 PIERGYVVNWDTQQQIWEKTFG--SMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFG 119
Query: 458 FDSAY 472
F +
Sbjct: 120 FTEVH 124
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 278 PMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYE 457
P+E G V NW+ +W+ TFG M+V+ ++I LT+ + E++F+ +
Sbjct: 62 PIERGYVVNWDTQQQIWEKTFG--SMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFG 119
Query: 458 FDSAY 472
F +
Sbjct: 120 FTEVH 124
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 350 KMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYEFDSAYVAIQAVLTLYAQD 511
++ V+P + K+LL+ P PT +++++ E +F SA + Q L LYA D
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYD 319
>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
protein C48E7.6 protein.
Length = 1764
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 247 DASSPTIKSLTSISPILFSARMIGLPTMEGNINAGKLLPAKPHFTKPVPLS-QTITFRP 74
++S +++L S+ P++ A P INA LL + P F PL +TF P
Sbjct: 1479 NSSELRVRALVSVQPVIVEADT-ATPLTTSQINASTLLNSSPRFFLTSPLKFGRLTFDP 1536
>AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical
protein Y116A8C.5 protein.
Length = 675
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +2
Query: 272 SYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFEK 451
S+P + + H +TF P M++ T++ LT + R K +E + +
Sbjct: 493 SFPDYANIAFTSNTLAHEMGHTFSPHLMDIMTGTTEVWLTPKETEEYEKRVKCLEDQYTE 552
Query: 452 YE 457
Y+
Sbjct: 553 YD 554
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,135,475
Number of Sequences: 27780
Number of extensions: 378275
Number of successful extensions: 1156
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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