Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0273
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.25
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.25
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.25
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.25
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.25
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.25
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.25
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.25
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 27 0.25
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 23 4.0
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 22 5.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 5.3
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 9.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 9.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 9.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 9.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 9.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 9.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 9.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.3
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFA---GSNFPAFIFPSMVGRPIIRAENKIGDIDVKDL-MV 233
DD K + +G+++ F + PA + + P+ + ++ I +K+L +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTI-LKELRFI 408
Query: 234 GDEASKLDPCLKLATLWRMGSYVIGRTCATCGTTHSV 344
D K D ++ + W+ + V+ R C T +V
Sbjct: 409 TDRMKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFA---GSNFPAFIFPSMVGRPIIRAENKIGDIDVKDL-MV 233
DD K + +G+++ F + PA + + P+ + ++ I +K+L +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTI-LKELRFI 408
Query: 234 GDEASKLDPCLKLATLWRMGSYVIGRTCATCGTTHSV 344
D K D ++ + W+ + V+ R C T +V
Sbjct: 409 TDRMKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFA---GSNFPAFIFPSMVGRPIIRAENKIGDIDVKDL-MV 233
DD K + +G+++ F + PA + + P+ + ++ I +K+L +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTI-LKELRFI 408
Query: 234 GDEASKLDPCLKLATLWRMGSYVIGRTCATCGTTHSV 344
D K D ++ + W+ + V+ R C T +V
Sbjct: 409 TDRMKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFA---GSNFPAFIFPSMVGRPIIRAENKIGDIDVKDL-MV 233
DD K + +G+++ F + PA + + P+ + ++ I +K+L +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTI-LKELRFI 408
Query: 234 GDEASKLDPCLKLATLWRMGSYVIGRTCATCGTTHSV 344
D K D ++ + W+ + V+ R C T +V
Sbjct: 409 TDRMKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFA---GSNFPAFIFPSMVGRPIIRAENKIGDIDVKDL-MV 233
DD K + +G+++ F + PA + + P+ + ++ I +K+L +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTI-LKELRFI 408
Query: 234 GDEASKLDPCLKLATLWRMGSYVIGRTCATCGTTHSV 344
D K D ++ + W+ + V+ R C T +V
Sbjct: 409 TDRMKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFA---GSNFPAFIFPSMVGRPIIRAENKIGDIDVKDL-MV 233
DD K + +G+++ F + PA + + P+ + ++ I +K+L +
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTI-LKELRFI 408
Query: 234 GDEASKLDPCLKLATLWRMGSYVIGRTCATCGTTHSV 344
D K D ++ + W+ + V+ R C T +V
Sbjct: 409 TDRMKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFA---GSNFPAFIFPSMVGRPIIRAENKIGDIDVKDL-MV 233
DD K + +G+++ F + PA + + P+ + ++ I +K+L +
Sbjct: 418 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTI-LKELRFI 476
Query: 234 GDEASKLDPCLKLATLWRMGSYVIGRTCATCGTTHSV 344
D K D ++ + W+ + V+ R C T +V
Sbjct: 477 TDRMKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 513
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFA---GSNFPAFIFPSMVGRPIIRAENKIGDIDVKDL-MV 233
DD K + +G+++ F + PA + + P+ + ++ I +K+L +
Sbjct: 418 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTI-LKELRFI 476
Query: 234 GDEASKLDPCLKLATLWRMGSYVIGRTCATCGTTHSV 344
D K D ++ + W+ + V+ R C T +V
Sbjct: 477 TDRMKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 513
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 26.6 bits (56), Expect = 0.25
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = +3
Query: 435 R*CLKSTSSTALTLRYKRCSRCTLRTDIGSGRGLG*RCDAHLSRV*RVRAASSHQEAGHS 614
R C K+ + L + RC C L+ I G + + + R ++ Q++ HS
Sbjct: 102 RPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSHS 161
Query: 615 RAGYHEVSHQI 647
R+ V+ ++
Sbjct: 162 RSQEKAVAAEL 172
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +3
Query: 435 R*CLKSTSSTALTLRYKRCSRCTLRTDIGSG 527
R C K+ + L + RC C L+ I G
Sbjct: 53 RPCTKNQQCSILRINRNRCQYCRLKKCIAVG 83
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -3
Query: 589 EAARTLHTRDKCASHRHPSPRPLPISVLSVQR 494
+AA + R++ A H + S P+P + +V +
Sbjct: 8 QAAEYIERREREAEHGYASTMPMPDDMRTVTK 39
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 630 RDIPPGYVQPP 598
R PGYVQPP
Sbjct: 110 RPASPGYVQPP 120
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 29 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 63
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 29 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 63
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 29 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 63
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 29 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 63
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 29 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 63
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 29 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 63
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 29 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 63
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 278 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 312
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 278 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 312
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 278 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 312
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 278 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 312
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 278 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 312
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 278 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 312
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 277 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 311
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -3
Query: 571 HTRDKCASHRHPSPRPLPISVLSVQREHRLYRNVS 467
H R++ + R+ R +RE+R YR S
Sbjct: 278 HLRERTSRRRYSRSREREQKSYKNEREYREYRETS 312
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,556
Number of Sequences: 438
Number of extensions: 4905
Number of successful extensions: 28
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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