Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0273
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 119 2e-27
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 98 5e-21
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 97 1e-20
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 97 1e-20
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 96 2e-20
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 96 2e-20
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 96 2e-20
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 96 3e-20
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 96 3e-20
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 96 3e-20
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 96 3e-20
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 93 1e-19
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 91 1e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 73 2e-13
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 60 2e-09
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 54 1e-07
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 52 4e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 5e-05
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 43 2e-04
At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR cla... 29 2.5
At2g25820.1 68415.m03098 transcription factor, putative similar ... 29 2.5
At4g39610.1 68417.m05599 expressed protein contains Pfam profile... 29 4.4
At2g13620.1 68415.m01501 cation/hydrogen exchanger, putative (CH... 28 7.6
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 119 bits (287), Expect = 2e-27
Identities = 49/82 (59%), Positives = 68/82 (82%)
Frame = +2
Query: 263 LEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVM 442
L+++YP+ NG+V+NW+DM HVWD+ F +++ ++P + KILLT+PP+NP+KNREKMIE M
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFY-NELKINPSDCKILLTDPPLNPSKNREKMIETM 124
Query: 443 FEKYEFDSAYVAIQAVLTLYAQ 508
FEKY F ++ IQAVLTLYAQ
Sbjct: 125 FEKYNFAGVFIQIQAVLTLYAQ 146
Score = 84.2 bits (199), Expect = 8e-17
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 242
MD+K V+VCDNGTG+VKCGFAG NFP +FP +VGRP++R E + + VKD++VG+
Sbjct: 1 MDNKN--VVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGET 58
Query: 243 ASKL 254
S+L
Sbjct: 59 CSEL 62
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/77 (45%), Positives = 48/77 (62%)
Frame = +1
Query: 508 GLIXXXXXXXXXXXTHICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSAD 687
GL+ TH+ PV + ++ PHLT+R+++AGR IT Y R YA N +AD
Sbjct: 147 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTAD 206
Query: 688 FETVKMMKEKLCYIRYN 738
FETV+ +KEKLCYI Y+
Sbjct: 207 FETVREIKEKLCYISYD 223
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 98.3 bits (234), Expect = 5e-21
Identities = 42/82 (51%), Positives = 62/82 (75%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+GVV NW+DM +W +TF +++ ++P+E ILLTE P+NP NREKM ++
Sbjct: 67 ILSLKYPIEHGVVSNWDDMEKIWHHTFY-NELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + F S Y+ IQAVL+LY+
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYS 147
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE +ALPH RLD+AGRD+T Y R Y + SA+ E V+ +KEKLCYI
Sbjct: 163 SHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYI 222
Query: 730 RYNIE 744
+ E
Sbjct: 223 AVDYE 227
Score = 64.1 bits (149), Expect = 9e-11
Identities = 34/63 (53%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = +3
Query: 63 MDDKGRK--VIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVG 236
M D G + IVCDNGTG VK GFAG + P +FPS+VGRP R + +D KD VG
Sbjct: 1 MSDLGDESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHRGVMVGMDEKDTFVG 58
Query: 237 DEA 245
DEA
Sbjct: 59 DEA 61
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E ILLTE P+NP NREKM ++
Sbjct: 66 ILTLKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYA 146
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE +ALPH RLD+AGRD+T R Y+F +A+ E V+ +KEKLCYI
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYI 221
Query: 730 RYNIE 744
+ E
Sbjct: 222 ALDYE 226
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E ILLTE P+NP NREKM ++
Sbjct: 66 ILTLKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYA 146
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE +ALPH RLD+AGRD+T R Y+F +A+ E V+ +KEKLCYI
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYI 221
Query: 730 RYNIE 744
+ E
Sbjct: 222 ALDYE 226
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 66 ILTLKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYA 146
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE +ALPH RLD+AGRD+T + R Y+F +A+ E V+ MKEKL YI
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYI 221
Query: 730 RYNIE 744
+ E
Sbjct: 222 ALDFE 226
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 66 ILTLKYPIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYA 146
Score = 60.9 bits (141), Expect = 9e-10
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE +ALPH RLD+AGRD+T R Y F +A+ E V+ +KEKL Y+
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYV 221
Query: 730 RYNIE 744
+ E
Sbjct: 222 ALDYE 226
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 66 ILTLKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYA 146
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE +ALPH RLD+AGRD+T + R Y+F +A+ E V+ MKEKL YI
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYI 221
Query: 730 RYNIE 744
+ E
Sbjct: 222 ALDYE 226
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+GVV NW+DM +W +TF +++ + P+E +LLTE P+NP NREKM ++
Sbjct: 66 ILTLKYPIEHGVVSNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYA 146
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE F+LPH RLD+AGRD+T Y R Y F +A+ E V+ +KEKL ++
Sbjct: 162 SHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFV 221
Query: 730 RYNIE 744
+ E
Sbjct: 222 AVDYE 226
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +3
Query: 87 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
IVCDNGTG VK GFAG + P +FPS+VGRP R + ++ KD VGDEA
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHHGVMVGMNQKDAYVGDEA 60
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+GVV NW+DM +W +TF +++ + P+E +LLTE P+NP NREKM ++
Sbjct: 66 ILTLKYPIEHGVVSNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYA 146
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE F+LPH RLD+AGRD+T Y R Y F +A+ E V+ +KEKL ++
Sbjct: 162 SHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFV 221
Query: 730 RYNIE 744
+ E
Sbjct: 222 AVDYE 226
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +3
Query: 87 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
IVCDNGTG VK GFAG + P +FPS+VGRP R + ++ KD VGDEA
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHHGVMVGMNQKDAYVGDEA 60
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP NREKM ++
Sbjct: 66 ILTLKYPIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYA 146
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE +ALPH RLD+AGRD+T Y R Y+F SA+ E V+ +KEKL YI
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYI 221
Query: 730 RYNIE 744
+ E
Sbjct: 222 ALDYE 226
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +3
Query: 66 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YP+E+GVV NW+DM +W +TF +++ + P+E +LLTE P+NP NREKM ++
Sbjct: 66 ILTLKYPIEHGVVSNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + + YVAIQAVL+LYA
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYA 146
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H P+YE F+LPH RLD+AGRD+T Y R Y F +A+ E V+ +KEKL ++
Sbjct: 162 SHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFV 221
Query: 730 RYNIE 744
+ E
Sbjct: 222 AVDYE 226
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +3
Query: 87 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 245
IVCDNGTG VK GFAG + P +FPS+VGRP R + ++ KD VGDEA
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHHGVMVGMNQKDAYVGDEA 60
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/82 (48%), Positives = 60/82 (73%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + PME+G+V NW+DM +W YTF +++ VDP+E +LLTE P NP NREKM ++
Sbjct: 55 ILTLKDPMEHGIVNNWDDMEKIWHYTFY-NELRVDPEEHPVLLTEAPYNPKANREKMTQI 113
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE ++ + YV++Q+VL LY+
Sbjct: 114 MFESFDVPAMYVSMQSVLYLYS 135
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/65 (46%), Positives = 40/65 (61%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
+H PVYE +ALPH RLD+ GRD+T Y R Y + SA+ E V+ +KEKLCY+
Sbjct: 151 SHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYV 210
Query: 730 RYNIE 744
+ E
Sbjct: 211 ALDYE 215
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +3
Query: 81 KVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRP 179
K IVCD G G V+ GFAG P +FP +VGRP
Sbjct: 2 KPIVCDKGHGMVQAGFAGDEAPKVVFPCVVGRP 34
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/82 (48%), Positives = 59/82 (71%)
Frame = +2
Query: 260 MLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEV 439
+L + YPME+GVV NW+DM +W +TF S++ V P+E +LLTE P+NP +REKM ++
Sbjct: 21 ILTLDYPMEHGVVSNWDDMEKIWYHTFY-SELRVAPEEHPVLLTEAPLNPKADREKMTQI 79
Query: 440 MFEKYEFDSAYVAIQAVLTLYA 505
MFE + S Y+ +QA L+L+A
Sbjct: 80 MFETFAVPSMYIGMQAALSLHA 101
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
++I P+YE ALPH RLD+AGR +T Y R Y SA+ E V+ +KE+ YI
Sbjct: 117 SYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGYT---SAEREVVRDIKEQFGYI 173
Query: 730 RYNIE 744
+ E
Sbjct: 174 ALDYE 178
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/81 (39%), Positives = 55/81 (67%)
Frame = +2
Query: 263 LEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVM 442
+EV P+++G+V +W+ + ++W++ F S + +DP E +LL EPP+N + REK E+M
Sbjct: 89 MEVLSPIKDGIVSDWDLVDNIWEHAF-KSCLMIDPTEHPMLLAEPPLNTQQQREKAAELM 147
Query: 443 FEKYEFDSAYVAIQAVLTLYA 505
FEKY+ + ++A VLT +A
Sbjct: 148 FEKYKVPALFMAKNPVLTSFA 168
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 87 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLD 257
IV D G+ K G+AG + P +FPS++G + E D+D E SK +
Sbjct: 10 IVVDLGSHTCKAGYAGEDAPKAVFPSVIG-AVDGVEAMDVDVDSTKTNSNSEDSKTE 65
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/86 (32%), Positives = 48/86 (55%)
Frame = +2
Query: 248 QTGSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREK 427
++ S + YP+E+G V +W+ M W + + DP++ LLTE P+ P ++RE
Sbjct: 79 RSSSTHNLHYPIEHGQVEDWDAMERYWQQCIF-NYLRCDPEDHYFLLTESPLTPPESREY 137
Query: 428 MIEVMFEKYEFDSAYVAIQAVLTLYA 505
E++FE + Y+A+ +VL L A
Sbjct: 138 TGEILFETFNVPGLYIAVNSVLALAA 163
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 63 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMV 170
MD R IV DNGTG+ K GFAG+ P FI P++V
Sbjct: 1 MDPTSRPAIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCY 726
TH+ PV E + + + + IAG+D+T + R F+ + +KE CY
Sbjct: 184 THVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCY 242
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +2
Query: 278 PMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYE 457
P+E G++R+W+ M + Y + E IL T+P P RE+++++MFE +
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 458 FDSAYVAIQAVLTLYA 505
Y + QAVL+LYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +2
Query: 263 LEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREK 427
+E+ P ++G+V +W+ + +VWD+ F M +DP E +LL EPP+N + REK
Sbjct: 83 MEILSPTKDGIVTDWDMVDNVWDHAFRNCLM-IDPTEHPMLLAEPPLNSQQQREK 136
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 87 IVCDNGTGFVKCGFAGSNFPAFIFPSMVG 173
IV D G+ K G+AG + P +FPS+VG
Sbjct: 10 IVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 278 PMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFEKYE 457
P ++ VV +E M ++ DY F N + IL+TE NP ++R KM E++FE Y
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 458 FDSAYVAIQAVLT 496
+ + A +
Sbjct: 145 VPAVAFGVDAAFS 157
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 VSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIEVMFE 448
V P++ G + N + +W + F S +++ P + +LLTE P++ + E++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLF-TSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFE 119
Query: 449 KYEFDSAYVA-IQAVLTLY 502
+ F S Y+A Q+++ LY
Sbjct: 120 DFGFSSLYIAHPQSLVHLY 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 550 THICPVYEEFALPHLTRRLDIAGRDITRYXXXXXXXRXYAFNHSADFETVKMMKEKLCYI 729
TH PV F L H +R+D+ G+ T Y R + N + V KEKLC++
Sbjct: 164 THAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFV 221
Query: 730 RYNI 741
++
Sbjct: 222 SLDL 225
>At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 985
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 340 ECVVPHVAHVLPITYDPILHRVAN-FKHGSSLDASSPTIKSLTSI 209
EC P + +L + Y+ RVAN K S++ A + +++ LT +
Sbjct: 2 ECCAPVIGEILRLMYESTFSRVANAIKFKSNVKALNESLERLTEL 46
>At2g25820.1 68415.m03098 transcription factor, putative similar to
TINY [Arabidopsis thaliana] GI:1246403
Length = 166
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 207 DIDVKDLMVGDEASKLDPCLKLATLW 284
D D GD++ LDPCLK + LW
Sbjct: 138 DATENDFRYGDDSVLLDPCLKESFLW 163
>At4g39610.1 68417.m05599 expressed protein contains Pfam profile
PF04759: Protein of unknown function, DUF617
Length = 264
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 584 SANSSYTGQMCVTPSPESTTTPDISPERTT*APLVSQRKRCRTRTFQ 444
S++SS TPSP STTTP + P S++K+ RT F+
Sbjct: 13 SSSSSSIPPSSPTPSPTSTTTP--PRQHPLLQPPSSKKKKNRTNVFR 57
>At2g13620.1 68415.m01501 cation/hydrogen exchanger, putative
(CHX15) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 821
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 257 SMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTKNREKMIE 436
++LE S+P + + + + H+ + T S M + K P +N T+ + I
Sbjct: 472 NLLEASHPTKRSPICIY--VLHLVELTGRASAMLIVHNTRKS--GRPALNRTQAQSDHII 527
Query: 437 VMFEKYEFDSAYVAIQAVLTL 499
FE YE +A+VA+Q + +
Sbjct: 528 NAFENYEQHAAFVAVQPLTAI 548
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,148,376
Number of Sequences: 28952
Number of extensions: 346158
Number of successful extensions: 999
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -