Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0272
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5VQH8 Cluster: Putative uncharacterized protein P0701D...    36   1.4  
UniRef50_UPI0000E7FB04 Cluster: PREDICTED: hypothetical protein;...    34   4.3  
UniRef50_Q7VH69 Cluster: Putative uncharacterized protein; n=2; ...    33   5.7  
UniRef50_Q225P4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  
UniRef50_Q4U3K9 Cluster: Aryl hydrocarbon receptor 1B; n=14; Eut...    33   7.6  
UniRef50_Q5JRC9 Cluster: Protein FAM47A; n=5; Catarrhini|Rep: Pr...    33   7.6  
UniRef50_A2WEI9 Cluster: Mannose-1-phosphate guanylyltransferase...    33   10.0 

>UniRef50_Q5VQH8 Cluster: Putative uncharacterized protein
           P0701D05.21; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0701D05.21 - Oryza sativa subsp. japonica (Rice)
          Length = 124

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -2

Query: 608 IWPSRRKRPRTRVGDRLRASPARTGKARSRLAAHSSRQR 492
           IWP RR+RP +    R +A PAR  + R+   A   R+R
Sbjct: 19  IWPWRRRRPASHPAPRRQALPARRRRRRAEAVARPRRRR 57


>UniRef50_UPI0000E7FB04 Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 269

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = -2

Query: 602 PSRRKRPRTRVGDRLRASPARTGKARSRLAA 510
           PSRR  PR +   RLRA+P+R G AR  L A
Sbjct: 138 PSRRLAPRGQKVPRLRAAPSRVGAARLHLLA 168


>UniRef50_Q7VH69 Cluster: Putative uncharacterized protein; n=2;
           Proteobacteria|Rep: Putative uncharacterized protein -
           Helicobacter hepaticus
          Length = 532

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
 Frame = +2

Query: 269 ISCTNAVKVNSSEESSCKSAV*SRLYLNKQK*-VRPRKIGRESYALSRSRRDSQALRLET 445
           +  +  V +  S +   KS++  R  L++     +P  + +++++L  + +   A RLE 
Sbjct: 409 VGASKNVSLTQSSQELEKSSIDRRTALSQSDFSAQPANLKQDTHSLDSNVKSYNAERLEL 468

Query: 446 RSDSRHQHSSPGV--QGGAGGWNEPLSENGLCLSELDLHG 559
             D      + GV  + G+G WN   ++    +SEL+  G
Sbjct: 469 NKDMPQGGEAQGVDSKNGSGVWNMEQNDPDFFMSELNKQG 508


>UniRef50_Q225P4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 331

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 24/75 (32%), Positives = 37/75 (49%)
 Frame = +2

Query: 299 SSEESSCKSAV*SRLYLNKQK*VRPRKIGRESYALSRSRRDSQALRLETRSDSRHQHSSP 478
           SSEE+S K     ++ +NKQ    PR+   +S A+ +SR+D      +   + +H+HSS 
Sbjct: 150 SSEENSLKLLQEPQMVINKQSRPEPRRF--QSAAIHQSRKD------QINHNHQHRHSSI 201

Query: 479 GVQGGAGGWNEPLSE 523
             Q       EP  E
Sbjct: 202 SRQESKSALQEPKQE 216


>UniRef50_Q4U3K9 Cluster: Aryl hydrocarbon receptor 1B; n=14;
           Euteleostomi|Rep: Aryl hydrocarbon receptor 1B - Danio
           rerio (Zebrafish) (Brachydanio rerio)
          Length = 940

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = -3

Query: 706 HSFNFSKRLVVQWRCVVKGRVLRLVVQGSHQT*YGRADGSGHGLV*VTASVQVQLGQAKP 527
           H +NF+++LV    C   G++      G+H   Y   D SG     + +S    LGQ + 
Sbjct: 763 HGYNFAEQLVTNGPCFPNGQMAHTQTMGTHIIDYNMTDNSGVEFT-MNSSSSGNLGQFQG 821

Query: 526 VLA 518
            +A
Sbjct: 822 AMA 824


>UniRef50_Q5JRC9 Cluster: Protein FAM47A; n=5; Catarrhini|Rep:
           Protein FAM47A - Homo sapiens (Human)
          Length = 778

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 596 RRKRPRTRVGDRLRASPARTGKARSRLAAHSSRQRLLVHPE 474
           R +  +TR G  LR+ P+ TG +R RLA   +R+   +H E
Sbjct: 338 RLEHSKTRRGSSLRSEPSETGVSRLRLAPPKTRRGSSLHAE 378


>UniRef50_A2WEI9 Cluster: Mannose-1-phosphate guanylyltransferase;
           n=1; Burkholderia dolosa AUO158|Rep: Mannose-1-phosphate
           guanylyltransferase - Burkholderia dolosa AUO158
          Length = 569

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 563 RLRASPARTGKARSRLAAHSSRQR 492
           R RA PARTG+A+ R  AH+ R R
Sbjct: 104 RARAHPARTGRAQHRTGAHAGRAR 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,536,691
Number of Sequences: 1657284
Number of extensions: 13005673
Number of successful extensions: 37615
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37588
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)