Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0272
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.76 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.3  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   5.4  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   5.4  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   5.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.4  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   9.4  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   9.4  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   9.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   9.4  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -1

Query: 225 ASSGAXPSPTNVNTSNRSE--YVSDTDKSKRTIAATSL 118
           ASS A  +PT+V +S RSE   V D    KR + A  L
Sbjct: 593 ASSSASSAPTSVCSSPRSEDKEVEDMPVLKRVLQAPPL 630


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 291  KSTPPRNHRARAPSNPGFI*INRNESDRVKLAENRT 398
            KS   R  + R    PG +  + +ESD  +L  +RT
Sbjct: 1762 KSVSSRRRQQRKQQTPGDVESDESESDPDQLTSSRT 1797


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 291  KSTPPRNHRARAPSNPGFI*INRNESDRVKLAENRT 398
            KS   R  + R    PG +  + +ESD  +L  +RT
Sbjct: 1758 KSVSSRRRQQRKQQTPGDVESDESESDPDQLTSSRT 1793


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 161 PPNAYRFRPPQNPRF 175


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 161 PPNAYRFRPPQNPRF 175


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 399 PPNAYRFRPPQNPRF 413


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 119 SDVAAIVRFDLSVSDTYSLLLLVFTLVGDGXAP 217
           S V ++  +D+S  +  +LLL++ +  G+G  P
Sbjct: 498 SQVLSMSDYDISNIEHEALLLVITSTFGNGDPP 530


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 627 CTTSLSTRPFTTHR 668
           C T  S+ P+ THR
Sbjct: 169 CATDFSSWPYDTHR 182


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 382 PPDMYRLRPPPNPRF 396


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 367 PPDMYRLRPPPNPRF 381


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300 PPRNHRARAPSNPGF 344
           PP  +R R P NP F
Sbjct: 383 PPDMYRLRPPPNPRF 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,131
Number of Sequences: 438
Number of extensions: 3363
Number of successful extensions: 29
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)