Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0270
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   4.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   4.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.8  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 436 GWHCTAKHYSELRSDPGL 383
           GW+  ++ YS++ ++PGL
Sbjct: 102 GWNEGSQKYSQVAANPGL 119


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 436 GWHCTAKHYSELRSDPGL 383
           GW+  ++ YS++ ++PGL
Sbjct: 102 GWNEGSQKYSQVAANPGL 119


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 335 IPNLNGMLNWSLFTT 291
           +P + GM+NW++ +T
Sbjct: 432 LPPIGGMMNWNMPST 446


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 657  PXGVSSDAKWVK*XREVNLAPKFLQSE 577
            P GV ++  +++   EV+++ ++LQ E
Sbjct: 1298 PLGVRTNITYIEETSEVHISKEYLQLE 1324


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 657  PXGVSSDAKWVK*XREVNLAPKFLQSE 577
            P GV ++  +++   EV+++ ++LQ E
Sbjct: 1298 PLGVRTNITYIEETSEVHISKEYLQLE 1324


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -2

Query: 108 FKDEWHTRCYWEHY*NLILVINFCVMLFSAT 16
           F++ W  R Y   Y   + ++   V++F+ T
Sbjct: 194 FQEPWGKRAYVTWYSISVFMVPLVVLIFTYT 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,546
Number of Sequences: 336
Number of extensions: 3580
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)